Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117919740

Identifier: 117919740

GI number: 117919740

Start: 1503154

End: 1503399

Strand: Direct

Name: 117919740

Synonym: Shewana3_1292

Alternate gene names: NA

Gene position: 1503154-1503399 (Clockwise)

Preceding gene: 117919739

Following gene: 117919742

Centisome position: 30.23

GC content: 65.04

Gene sequence:

>246_bases
ATGAGCACAACCAAGAAGCTGCGGCTGGGGCCGCTGCCCAAGACCGAAAGCGTCAAGCTCACCTTTGCCTGCCCGGCCAG
TCTTAAAACCGACCTCGACCGCTACGCCGCGCTGCACGCGCAGGCGTATGGCGAGGCAGTCGATGCGGCGACGCTGATCC
CGCACATGCTGGAAGCGTTCATGGCGGGGGATCGGGGATTCAGAAAAGGAGGGGCAGGCAAGGCCGCCCCGCCGAAGCCG
AGTTGA

Upstream 100 bases:

>100_bases
CCTTGACCCAACGGCCCGGCCTGCCGGTGCGGATCATCGTCAACCGCGACTTGGTGTTGCGGCCGTACCAGCCGCTGTTC
TTCAATCGGGGGACTTCACG

Downstream 100 bases:

>100_bases
CGATGCGGACGCCTCTACCATCCGCCCACGATGAAAGCGCAGCCCAAGGGCTGCGCTTTCGCTTTGAGCGGTGGCTTGCG
ATAGGCCGGGCTATGATGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 81; Mature: 80

Protein sequence:

>81_residues
MSTTKKLRLGPLPKTESVKLTFACPASLKTDLDRYAALHAQAYGEAVDAATLIPHMLEAFMAGDRGFRKGGAGKAAPPKP
S

Sequences:

>Translated_81_residues
MSTTKKLRLGPLPKTESVKLTFACPASLKTDLDRYAALHAQAYGEAVDAATLIPHMLEAFMAGDRGFRKGGAGKAAPPKP
S
>Mature_80_residues
STTKKLRLGPLPKTESVKLTFACPASLKTDLDRYAALHAQAYGEAVDAATLIPHMLEAFMAGDRGFRKGGAGKAAPPKPS

Specific function: Unknown

COG id: COG5639

COG function: function code S; Uncharacterized conserved small protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8542; Mature: 8411

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTKKLRLGPLPKTESVKLTFACPASLKTDLDRYAALHAQAYGEAVDAATLIPHMLEAF
CCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAGDRGFRKGGAGKAAPPKPS
HHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
STTKKLRLGPLPKTESVKLTFACPASLKTDLDRYAALHAQAYGEAVDAATLIPHMLEAF
CCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAGDRGFRKGGAGKAAPPKPS
HHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA