Click here to switch to the map view.

The map label for this gene is 117919716

Identifier: 117919716

GI number: 117919716

Start: 1481079

End: 1483052

Strand: Direct

Name: 117919716

Synonym: Shewana3_1268

Alternate gene names: NA

Gene position: 1481079-1483052 (Clockwise)

Preceding gene: 117919715

Following gene: 117919718

Centisome position: 29.79

GC content: 61.85

Gene sequence:

>1974_bases
ATGAGTGACTACCACGATGATGATTTTCGTATCCGTCCCAATGCGCCAAAGCACCGGGGACAGGGCTTTGTTTCCAAAGT
GCTCAAGCAGACAGGCAAAGCCAGTGGGGGCAAATCCTCGGCACGCCGTCAGACATCGGCGGGTAGCGCTGGCCAGCGGC
CCGGCTCACGTTTGGGGCGTGGCCATACCGCCGCACGCTTTACGGGCTCTTCACTGACGCCGTTCTCGCGCCGTGTCACT
ATCAAAACCCTGCTGGTCAATCAGCGCCGGGCTAGCCCGCAGTCGCTGGGGAAGCACCTGCGCTATATCGAGCGCGACGG
AGCGGGGCGTAATGGTGAGCCAGGCCGAGCCTATGGGCCGCAGATCGACGAGGCCGATCTCGACGCTTTCAAGGAACGCT
GTCAGGGCGACCGGCACCATTTCCGTTTCATCCTTTCGCCCGAGGATGGAGCTGAGCTAGGTGATCTACGCACTTACACA
CGTCATCTGATGAGCCGGATGGAAGCTGATCTAGGCACGCAGCTGGATTGGGTGGCAGTGGATCACTGGAATACTGACAA
CCCACACACGCATCTGGTTGTGCGTGGGCGTGACGACACTGGCAAAGACCTCATCATCGCCGGCGACTACATCGCCCACG
GCTTCCGCCATCGCGCCGCCGAACTGGCGACGGAATGGCTGGGGCGGCGCACTGAACTGGAGATCCAGCAGACCTTGCGA
CGCGAGGTGGAACAGGAGCGGTGGACGAGCCTGGATCGCACGCTGCAACGAGAGGCTGGCGATGACCACCGGGTGCAGAT
CGAACGCTTTATCGACCCGGCGTTGCAACGTCAGAGACAACTGCTCATTGGTCGCTTGCAACACTTGCAGCGCCTGGGCT
TGGCGGACGAGATACAGCCCGGCACCTGGAACATTCACGCCGATGCTGAGAAGACATTGCGTGCCCTGGGTGAACGTGGC
GATATCATCCGCACCCTGCAAAGGTCCATGAGCGGCCTTTCACGAGAACTGACCGTCTTTGAACCGGGTGAGAGCGGGCG
CAGTGTCATCGGGCGTGTGGCTGGTAAAGGACTCGCCGATGAGCTGCGCGACCGGGGTTATTTGGTGATTGACGGCGTGG
ATGGCAAGGCCCATTACATTTCACTCAACACCAGTGACGAGTTGACGAACTATCCCACCGGGGCCGTGGTGGAAGTGCGC
TGTTCTGCTGAACTACGTTCGGCCGACCGCAACATCGCGGAACTGGCAAGCGACGGCCTGTACCGCACAGACCATCACCT
AGTCATCGAACAAGGCCGAACCAAGGCTGGGCGCGACCCACAAGAAATCGTCGCAGCCCATGTTCGTCGCCTGGAAGCGT
TACGTCGTGTGGGCATTGTGGAGCGCGTGGCCGAGGGGCTATGGAAGGTGCCGGGCGACCTGCCTGAGCGTGGGCGTCAG
TATGATACTCAGCGTCTGGGCGGTGTGGCGGTGGAGCTGAAATCGCACCTGCCCATCGAACGTCAGGCGCGCGTGATCGG
CGCTACTTGGCTTGACCAGCAACTAATCGGCGGTGGTCGAGGATTCAGTGACATAGGCTTTGGTGGAGAGGTGAAGGAAG
CGTTGCAGGAACGAGCCGACTTCCTCGAAGAACAGGGGCTGGCCCATCGACGCGGGCTGGGTGTGATCCTGGCGCGCAAC
TTGTTGGCGACGCTGCGCAATCGGGAACTGGCACGAGCCGCGCAGGACATTGTCGCCGATACCGGCCTGGAGCATCGCCC
CGTGGCCGATGGGCAGCGCGTGGCGGGGATCTACCGGCGCAACGTCATGCTTGCCAGTGGACGCTACGCCATGCTCGATG
ACGGTATGGGGTTCAGCCTGGTGCCGTGGAAGCCGGTGATCGAGCAGCGGCTGGGTCAGCAGATCGCCGCGACTGTACGT
GGTGGTGGGGTGTCGTGGGAGATTGGGCGGCAGAGAGGGCCAACCATCGCTTAG

Upstream 100 bases:

>100_bases
GTTGCCACGGTGCCGTGAGGAGCGCGAAACCCGCACTGATGTTGATTTATCGGCGTGCTTTACGCGACGGAACACGCCAC
AGCTTTCTAGAGACTCAGCC

Downstream 100 bases:

>100_bases
TAAGCTGTTGTCTCGACTTTCGCATAGACCACCAAGCGCAGATGGCGTTCTGCGTCGATGGTCAACGAAGTGTGCTCAAA
TTCAACCACCTCACCATCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 657; Mature: 656

Protein sequence:

>657_residues
MSDYHDDDFRIRPNAPKHRGQGFVSKVLKQTGKASGGKSSARRQTSAGSAGQRPGSRLGRGHTAARFTGSSLTPFSRRVT
IKTLLVNQRRASPQSLGKHLRYIERDGAGRNGEPGRAYGPQIDEADLDAFKERCQGDRHHFRFILSPEDGAELGDLRTYT
RHLMSRMEADLGTQLDWVAVDHWNTDNPHTHLVVRGRDDTGKDLIIAGDYIAHGFRHRAAELATEWLGRRTELEIQQTLR
REVEQERWTSLDRTLQREAGDDHRVQIERFIDPALQRQRQLLIGRLQHLQRLGLADEIQPGTWNIHADAEKTLRALGERG
DIIRTLQRSMSGLSRELTVFEPGESGRSVIGRVAGKGLADELRDRGYLVIDGVDGKAHYISLNTSDELTNYPTGAVVEVR
CSAELRSADRNIAELASDGLYRTDHHLVIEQGRTKAGRDPQEIVAAHVRRLEALRRVGIVERVAEGLWKVPGDLPERGRQ
YDTQRLGGVAVELKSHLPIERQARVIGATWLDQQLIGGGRGFSDIGFGGEVKEALQERADFLEEQGLAHRRGLGVILARN
LLATLRNRELARAAQDIVADTGLEHRPVADGQRVAGIYRRNVMLASGRYAMLDDGMGFSLVPWKPVIEQRLGQQIAATVR
GGGVSWEIGRQRGPTIA

Sequences:

>Translated_657_residues
MSDYHDDDFRIRPNAPKHRGQGFVSKVLKQTGKASGGKSSARRQTSAGSAGQRPGSRLGRGHTAARFTGSSLTPFSRRVT
IKTLLVNQRRASPQSLGKHLRYIERDGAGRNGEPGRAYGPQIDEADLDAFKERCQGDRHHFRFILSPEDGAELGDLRTYT
RHLMSRMEADLGTQLDWVAVDHWNTDNPHTHLVVRGRDDTGKDLIIAGDYIAHGFRHRAAELATEWLGRRTELEIQQTLR
REVEQERWTSLDRTLQREAGDDHRVQIERFIDPALQRQRQLLIGRLQHLQRLGLADEIQPGTWNIHADAEKTLRALGERG
DIIRTLQRSMSGLSRELTVFEPGESGRSVIGRVAGKGLADELRDRGYLVIDGVDGKAHYISLNTSDELTNYPTGAVVEVR
CSAELRSADRNIAELASDGLYRTDHHLVIEQGRTKAGRDPQEIVAAHVRRLEALRRVGIVERVAEGLWKVPGDLPERGRQ
YDTQRLGGVAVELKSHLPIERQARVIGATWLDQQLIGGGRGFSDIGFGGEVKEALQERADFLEEQGLAHRRGLGVILARN
LLATLRNRELARAAQDIVADTGLEHRPVADGQRVAGIYRRNVMLASGRYAMLDDGMGFSLVPWKPVIEQRLGQQIAATVR
GGGVSWEIGRQRGPTIA
>Mature_656_residues
SDYHDDDFRIRPNAPKHRGQGFVSKVLKQTGKASGGKSSARRQTSAGSAGQRPGSRLGRGHTAARFTGSSLTPFSRRVTI
KTLLVNQRRASPQSLGKHLRYIERDGAGRNGEPGRAYGPQIDEADLDAFKERCQGDRHHFRFILSPEDGAELGDLRTYTR
HLMSRMEADLGTQLDWVAVDHWNTDNPHTHLVVRGRDDTGKDLIIAGDYIAHGFRHRAAELATEWLGRRTELEIQQTLRR
EVEQERWTSLDRTLQREAGDDHRVQIERFIDPALQRQRQLLIGRLQHLQRLGLADEIQPGTWNIHADAEKTLRALGERGD
IIRTLQRSMSGLSRELTVFEPGESGRSVIGRVAGKGLADELRDRGYLVIDGVDGKAHYISLNTSDELTNYPTGAVVEVRC
SAELRSADRNIAELASDGLYRTDHHLVIEQGRTKAGRDPQEIVAAHVRRLEALRRVGIVERVAEGLWKVPGDLPERGRQY
DTQRLGGVAVELKSHLPIERQARVIGATWLDQQLIGGGRGFSDIGFGGEVKEALQERADFLEEQGLAHRRGLGVILARNL
LATLRNRELARAAQDIVADTGLEHRPVADGQRVAGIYRRNVMLASGRYAMLDDGMGFSLVPWKPVIEQRLGQQIAATVRG
GGVSWEIGRQRGPTIA

Specific function: Unknown

COG id: COG3843

COG function: function code U; Type IV secretory pathway, VirD2 components (relaxase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73187; Mature: 73055

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDYHDDDFRIRPNAPKHRGQGFVSKVLKQTGKASGGKSSARRQTSAGSAGQRPGSRLGR
CCCCCCCCCEECCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCHHHCC
GHTAARFTGSSLTPFSRRVTIKTLLVNQRRASPQSLGKHLRYIERDGAGRNGEPGRAYGP
CCCCEEECCCCCCCCHHHEEHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
QIDEADLDAFKERCQGDRHHFRFILSPEDGAELGDLRTYTRHLMSRMEADLGTQLDWVAV
CCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEE
DHWNTDNPHTHLVVRGRDDTGKDLIIAGDYIAHGFRHRAAELATEWLGRRTELEIQQTLR
ECCCCCCCCEEEEEECCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
REVEQERWTSLDRTLQREAGDDHRVQIERFIDPALQRQRQLLIGRLQHLQRLGLADEIQP
HHHHHHHHHHHHHHHHHHCCCCHHEHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GTWNIHADAEKTLRALGERGDIIRTLQRSMSGLSRELTVFEPGESGRSVIGRVAGKGLAD
CCEEEECCHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCHHH
ELRDRGYLVIDGVDGKAHYISLNTSDELTNYPTGAVVEVRCSAELRSADRNIAELASDGL
HHHCCCEEEEECCCCCEEEEEECCCHHHCCCCCCCEEEEEECHHHHHHCCHHHHHHCCCC
YRTDHHLVIEQGRTKAGRDPQEIVAAHVRRLEALRRVGIVERVAEGLWKVPGDLPERGRQ
EECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCH
YDTQRLGGVAVELKSHLPIERQARVIGATWLDQQLIGGGRGFSDIGFGGEVKEALQERAD
HHHHHHCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
FLEEQGLAHRRGLGVILARNLLATLRNRELARAAQDIVADTGLEHRPVADGQRVAGIYRR
HHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHC
NVMLASGRYAMLDDGMGFSLVPWKPVIEQRLGQQIAATVRGGGVSWEIGRQRGPTIA
CEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCC
>Mature Secondary Structure 
SDYHDDDFRIRPNAPKHRGQGFVSKVLKQTGKASGGKSSARRQTSAGSAGQRPGSRLGR
CCCCCCCCEECCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCHHHCC
GHTAARFTGSSLTPFSRRVTIKTLLVNQRRASPQSLGKHLRYIERDGAGRNGEPGRAYGP
CCCCEEECCCCCCCCHHHEEHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
QIDEADLDAFKERCQGDRHHFRFILSPEDGAELGDLRTYTRHLMSRMEADLGTQLDWVAV
CCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEE
DHWNTDNPHTHLVVRGRDDTGKDLIIAGDYIAHGFRHRAAELATEWLGRRTELEIQQTLR
ECCCCCCCCEEEEEECCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
REVEQERWTSLDRTLQREAGDDHRVQIERFIDPALQRQRQLLIGRLQHLQRLGLADEIQP
HHHHHHHHHHHHHHHHHHCCCCHHEHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GTWNIHADAEKTLRALGERGDIIRTLQRSMSGLSRELTVFEPGESGRSVIGRVAGKGLAD
CCEEEECCHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCHHH
ELRDRGYLVIDGVDGKAHYISLNTSDELTNYPTGAVVEVRCSAELRSADRNIAELASDGL
HHHCCCEEEEECCCCCEEEEEECCCHHHCCCCCCCEEEEEECHHHHHHCCHHHHHHCCCC
YRTDHHLVIEQGRTKAGRDPQEIVAAHVRRLEALRRVGIVERVAEGLWKVPGDLPERGRQ
EECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCH
YDTQRLGGVAVELKSHLPIERQARVIGATWLDQQLIGGGRGFSDIGFGGEVKEALQERAD
HHHHHHCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
FLEEQGLAHRRGLGVILARNLLATLRNRELARAAQDIVADTGLEHRPVADGQRVAGIYRR
HHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHC
NVMLASGRYAMLDDGMGFSLVPWKPVIEQRLGQQIAATVRGGGVSWEIGRQRGPTIA
CEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA