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The map label for this gene is 117919185

Identifier: 117919185

GI number: 117919185

Start: 851205

End: 852284

Strand: Reverse

Name: 117919185

Synonym: Shewana3_0733

Alternate gene names: NA

Gene position: 852284-851205 (Counterclockwise)

Preceding gene: 117919186

Following gene: 117919177

Centisome position: 17.14

GC content: 42.59

Gene sequence:

>1080_bases
ATGAAAAAGACATTCATCTCTGCATCAGTTGCATCAGTATTAGCGCTGGCTTCATTCGGTGCGCTAGCCGAAGGCCCAAG
CTTCTACGGTCGTTTAGAGCTTGCTGTAACTAATACTGAAACAGGTGCAACTCTACAATCTGGCACAAACGGCTTAAACT
CAAACTATGCCGATGAGAATAACGCTGGTACCTATTTAGAAAACAACTTCTCTTTATTAGGTGTTAAAGGTACTGAGAAG
ATTGCTGATGGCTATGACGTTGTTTATCAAATGGAATTCCAAGTTGAAAGCACTTCTGGCTCAGGTGACGTGTTCAAAGC
TCGTAACACTTACTTAGGTTTAAAAACCAATGCAGGTACTGTATTAGTCGGTCGTAATGACACAGTATTCAAGCAAGCTG
AAGGCGGCGTAGATATTTTCGGTAACACCAACGCGGATATCGACCGTTTAGTTAGCGCTCAAACTCGTAGTGCCGATGGT
GTATGGTACTTCTCACCTAAACTCGGTGGTTTAGTGACATTAAATGCTAACTACCTGTTCGATGATAACAACGATGAAAA
AATAGACGGAAAACCTGCTCCAGATACCAATGAAAGCTTATACGCTCTGAGTGCAACTCTAGGTGATAGTAAGTTCAAAG
AGCAAAACTACTATGTAGCTGTTGCTTACAACAAAGGTATCGCTGGTGTTGATGCATACCGTGGTGTAGCCCAGGCTAAA
TTAGGTCAGTTCAAACTCGGTGGTTTATTCCAAAACTCTGAAAGCGTAACTGATAGCGCTATCGACGGTAACACTTACTT
CGTGAACGTATCTTACGATCTGAACGGTGTGAACCTGAAAGCTGAATACGGCTACGATGAAGCTGGTTTCGGTAAATATT
ACAGCACGTTAGGCAAAGCAGGTGCTGACGATATTAGCGTAAACAATATCAACGTTGGCGCTGACTACCGTTTATCCAAA
TCAACTATGGTGTATGGCCAGTACTCAATGTACAAAGGCGACTATAAAGACACTACTGGCGCTAAAATCGACTTACAAGA
CGACAACGTATTCTCTGTAGGTGTACGTTACGACTTCTAA

Upstream 100 bases:

>100_bases
ATCGGCGGCAACTTTGTTACCGATTCCAGTAACAAATGTGTTAAACCACACAAAAACCATGAAAAATGGAAAAGAACTTA
GGTTCGAGGGAGCACAAAAC

Downstream 100 bases:

>100_bases
TATCCTTCTTAAAAGATATTAGCGAAAAAACCTACCGCTTGCGGTAGGTTTTTTTATACCTCAAATTTAGTACAAAGTAC
TGAGTGATTGTCATAAAAAA

Product: porin

Products: NA

Alternate protein names: Porin Gram-Negative Type; Outer Membrane Protein; Gram-Negative Porin Superfamily; Outer Membrane Porin Protein; Porin Signal Peptide Protein; Outer Membrane Porin M

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MKKTFISASVASVLALASFGALAEGPSFYGRLELAVTNTETGATLQSGTNGLNSNYADENNAGTYLENNFSLLGVKGTEK
IADGYDVVYQMEFQVESTSGSGDVFKARNTYLGLKTNAGTVLVGRNDTVFKQAEGGVDIFGNTNADIDRLVSAQTRSADG
VWYFSPKLGGLVTLNANYLFDDNNDEKIDGKPAPDTNESLYALSATLGDSKFKEQNYYVAVAYNKGIAGVDAYRGVAQAK
LGQFKLGGLFQNSESVTDSAIDGNTYFVNVSYDLNGVNLKAEYGYDEAGFGKYYSTLGKAGADDISVNNINVGADYRLSK
STMVYGQYSMYKGDYKDTTGAKIDLQDDNVFSVGVRYDF

Sequences:

>Translated_359_residues
MKKTFISASVASVLALASFGALAEGPSFYGRLELAVTNTETGATLQSGTNGLNSNYADENNAGTYLENNFSLLGVKGTEK
IADGYDVVYQMEFQVESTSGSGDVFKARNTYLGLKTNAGTVLVGRNDTVFKQAEGGVDIFGNTNADIDRLVSAQTRSADG
VWYFSPKLGGLVTLNANYLFDDNNDEKIDGKPAPDTNESLYALSATLGDSKFKEQNYYVAVAYNKGIAGVDAYRGVAQAK
LGQFKLGGLFQNSESVTDSAIDGNTYFVNVSYDLNGVNLKAEYGYDEAGFGKYYSTLGKAGADDISVNNINVGADYRLSK
STMVYGQYSMYKGDYKDTTGAKIDLQDDNVFSVGVRYDF
>Mature_359_residues
MKKTFISASVASVLALASFGALAEGPSFYGRLELAVTNTETGATLQSGTNGLNSNYADENNAGTYLENNFSLLGVKGTEK
IADGYDVVYQMEFQVESTSGSGDVFKARNTYLGLKTNAGTVLVGRNDTVFKQAEGGVDIFGNTNADIDRLVSAQTRSADG
VWYFSPKLGGLVTLNANYLFDDNNDEKIDGKPAPDTNESLYALSATLGDSKFKEQNYYVAVAYNKGIAGVDAYRGVAQAK
LGQFKLGGLFQNSESVTDSAIDGNTYFVNVSYDLNGVNLKAEYGYDEAGFGKYYSTLGKAGADDISVNNINVGADYRLSK
STMVYGQYSMYKGDYKDTTGAKIDLQDDNVFSVGVRYDF

Specific function: Unknown

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38583; Mature: 38583

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTFISASVASVLALASFGALAEGPSFYGRLELAVTNTETGATLQSGTNGLNSNYADEN
CCCEEEHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCEEECCCCCCCCCCCCCC
NAGTYLENNFSLLGVKGTEKIADGYDVVYQMEFQVESTSGSGDVFKARNTYLGLKTNAGT
CCCCEEECCEEEEEECCCHHHCCCEEEEEEEEEEEEECCCCCCEEEECCEEEEEEECCCE
VLVGRNDTVFKQAEGGVDIFGNTNADIDRLVSAQTRSADGVWYFSPKLGGLVTLNANYLF
EEECCCCCEEEECCCCEEEECCCCCCHHHHHHHCCCCCCCEEEECCCCCEEEEEECEEEE
DDNNDEKIDGKPAPDTNESLYALSATLGDSKFKEQNYYVAVAYNKGIAGVDAYRGVAQAK
ECCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHH
LGQFKLGGLFQNSESVTDSAIDGNTYFVNVSYDLNGVNLKAEYGYDEAGFGKYYSTLGKA
CCCEEECCEEECCCCCCCCEECCCEEEEEEEEECCCEEEEEECCCCCCCCCHHHHHHCCC
GADDISVNNINVGADYRLSKSTMVYGQYSMYKGDYKDTTGAKIDLQDDNVFSVGVRYDF
CCCCEEEEEEECCCCEEECCCEEEEEEEEEECCCCCCCCCCEEEECCCCEEEEEEEECC
>Mature Secondary Structure
MKKTFISASVASVLALASFGALAEGPSFYGRLELAVTNTETGATLQSGTNGLNSNYADEN
CCCEEEHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCEEECCCCCCCCCCCCCC
NAGTYLENNFSLLGVKGTEKIADGYDVVYQMEFQVESTSGSGDVFKARNTYLGLKTNAGT
CCCCEEECCEEEEEECCCHHHCCCEEEEEEEEEEEEECCCCCCEEEECCEEEEEEECCCE
VLVGRNDTVFKQAEGGVDIFGNTNADIDRLVSAQTRSADGVWYFSPKLGGLVTLNANYLF
EEECCCCCEEEECCCCEEEECCCCCCHHHHHHHCCCCCCCEEEECCCCCEEEEEECEEEE
DDNNDEKIDGKPAPDTNESLYALSATLGDSKFKEQNYYVAVAYNKGIAGVDAYRGVAQAK
ECCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHH
LGQFKLGGLFQNSESVTDSAIDGNTYFVNVSYDLNGVNLKAEYGYDEAGFGKYYSTLGKA
CCCEEECCEEECCCCCCCCEECCCEEEEEEEEECCCEEEEEECCCCCCCCCHHHHHHCCC
GADDISVNNINVGADYRLSKSTMVYGQYSMYKGDYKDTTGAKIDLQDDNVFSVGVRYDF
CCCCEEEEEEECCCCEEECCCEEEEEEEEEECCCCCCCCCCEEEECCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA