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The map label for this gene is 117919186

Identifier: 117919186

GI number: 117919186

Start: 852715

End: 853779

Strand: Reverse

Name: 117919186

Synonym: Shewana3_0734

Alternate gene names: NA

Gene position: 853779-852715 (Counterclockwise)

Preceding gene: 117919188

Following gene: 117919185

Centisome position: 17.17

GC content: 45.26

Gene sequence:

>1065_bases
ATGAAAAAGAATCTGCTCACTACAGCGATTGCCGCTAGTCTCGCATTTTGCTCATTTAACTCACTGGCCGATGGCCCTGA
ATTTTACGGCCATGTCGACCTGAGTATCACCGACTCAGAAAAAGGTTACGCCACTCAAAATCAGAAAGATGGCACAGTAC
TCGAAAACAACTTTTCTTGGGTGGGTGTCAAAGGCTCTGAAAGCGTAAGCCCTTACTTTGATATCATCTATCAAATGGAA
TTTGGCGTAGAAAATTTTGATAACTCGAATAAAACCTTCAATGCACGTAATACCTTCCTTGGGGTGAGAAGCGTTGCGGG
TACCGTTTTAGCGGGCCGTAACGATACGGTATTTAAAGCGTCCGAAGGCGGTTTTGATTTGTTTGGCAACACCAACGCCG
ACATCGACCTGTTATTGGCAGGCCAAACGCGCTCAGCCGATGGCATTTCCTATTATTCGCCTAAGATCGCCGATCTTATC
ACCCTCAACGCCACCTATCTGATGAGTGACAACTACGATCAACGCGATAGCCAAGGCAACGAAGTTTATAACCAAGATCA
AATGTATGCCTTAAGCGCCACTTTAGGCGACAAGACCTTTAAAACCCATAATTACTATGTTGCGGCGGCCTATAACGATG
GCATCGAAAATATCGAAGCCTACCGTGGTGTTGCCCAAGCAAAATTTGGCGATTTCCTCTTTGGTGCCATTTATCAGCAC
AGCGAGCATATTGACGACAGATTCTCAAATCTCTCGGGTGAGACCTATTTTGTAAATGCTGCTTATCTGATGGATAATTT
GAAACTCAAGCTGGTTTACGGCAAAGATGACTCTGGTTTAGGCAAATATGTCAGCCGTTTTGTCGGCAGCCAAGACAGCG
GTAACCTCGAACAAGTGAGTGATGTCGACCTTCAACAGCTCACAGTAGGCGCAGATTACCGACTTAGCACTAAGACTATG
GTCTATGGTCACTACACTCGCTTCGACGGCGACCTTATGCTAGCAGGTACAAAACAAGACCTAGACGACAACGTGTTTAC
TGTAGGTTTACGTATTGATTTTTAA

Upstream 100 bases:

>100_bases
TTTGCCTGTCACACTGCGCAGCACCAAAGCTCCACACTCCGCAGTAAAAAGAGATAACTCTTGCTGCATAAAATAATGAT
ATAAGTACAGGAAAATGAAG

Downstream 100 bases:

>100_bases
TAGTATTATTCTAATTCGAAACAGATAATATTTGATAAAAAAGCGGCTTTGGCCGCTTTTTTATTGTATCTCATACTAAA
TAGCATTCTCCCACCCCATT

Product: porin

Products: NA

Alternate protein names: Porin Gram-Negative Type; Outer Membrane Protein; Gram-Negative Porin Superfamily; Outer Membrane Porin Protein; Porin Signal Peptide Protein

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MKKNLLTTAIAASLAFCSFNSLADGPEFYGHVDLSITDSEKGYATQNQKDGTVLENNFSWVGVKGSESVSPYFDIIYQME
FGVENFDNSNKTFNARNTFLGVRSVAGTVLAGRNDTVFKASEGGFDLFGNTNADIDLLLAGQTRSADGISYYSPKIADLI
TLNATYLMSDNYDQRDSQGNEVYNQDQMYALSATLGDKTFKTHNYYVAAAYNDGIENIEAYRGVAQAKFGDFLFGAIYQH
SEHIDDRFSNLSGETYFVNAAYLMDNLKLKLVYGKDDSGLGKYVSRFVGSQDSGNLEQVSDVDLQQLTVGADYRLSTKTM
VYGHYTRFDGDLMLAGTKQDLDDNVFTVGLRIDF

Sequences:

>Translated_354_residues
MKKNLLTTAIAASLAFCSFNSLADGPEFYGHVDLSITDSEKGYATQNQKDGTVLENNFSWVGVKGSESVSPYFDIIYQME
FGVENFDNSNKTFNARNTFLGVRSVAGTVLAGRNDTVFKASEGGFDLFGNTNADIDLLLAGQTRSADGISYYSPKIADLI
TLNATYLMSDNYDQRDSQGNEVYNQDQMYALSATLGDKTFKTHNYYVAAAYNDGIENIEAYRGVAQAKFGDFLFGAIYQH
SEHIDDRFSNLSGETYFVNAAYLMDNLKLKLVYGKDDSGLGKYVSRFVGSQDSGNLEQVSDVDLQQLTVGADYRLSTKTM
VYGHYTRFDGDLMLAGTKQDLDDNVFTVGLRIDF
>Mature_354_residues
MKKNLLTTAIAASLAFCSFNSLADGPEFYGHVDLSITDSEKGYATQNQKDGTVLENNFSWVGVKGSESVSPYFDIIYQME
FGVENFDNSNKTFNARNTFLGVRSVAGTVLAGRNDTVFKASEGGFDLFGNTNADIDLLLAGQTRSADGISYYSPKIADLI
TLNATYLMSDNYDQRDSQGNEVYNQDQMYALSATLGDKTFKTHNYYVAAAYNDGIENIEAYRGVAQAKFGDFLFGAIYQH
SEHIDDRFSNLSGETYFVNAAYLMDNLKLKLVYGKDDSGLGKYVSRFVGSQDSGNLEQVSDVDLQQLTVGADYRLSTKTM
VYGHYTRFDGDLMLAGTKQDLDDNVFTVGLRIDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39159; Mature: 39159

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNLLTTAIAASLAFCSFNSLADGPEFYGHVDLSITDSEKGYATQNQKDGTVLENNFSW
CCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEECCCEE
VGVKGSESVSPYFDIIYQMEFGVENFDNSNKTFNARNTFLGVRSVAGTVLAGRNDTVFKA
EEECCCCCCCHHEEEEEEEECCCCCCCCCCCEEECCHHEEEHHHHHCEEEECCCCCEEEE
SEGGFDLFGNTNADIDLLLAGQTRSADGISYYSPKIADLITLNATYLMSDNYDQRDSQGN
CCCCEEEECCCCCCEEEEEECCCCCCCCCEECCCCEEEEEEEEEEEEECCCCCCCCCCCC
EVYNQDQMYALSATLGDKTFKTHNYYVAAAYNDGIENIEAYRGVAQAKFGDFLFGAIYQH
CCCCCCCEEEEEEECCCCEEEECCEEEEEEECCCHHHHHHHHCHHHHHHHHHHHHHHHHH
SEHIDDRFSNLSGETYFVNAAYLMDNLKLKLVYGKDDSGLGKYVSRFVGSQDSGNLEQVS
HHHHHHHHHCCCCCEEEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHC
DVDLQQLTVGADYRLSTKTMVYGHYTRFDGDLMLAGTKQDLDDNVFTVGLRIDF
CCCHHHEEECCCEEEECEEEEEEEEEEECCCEEEEECCCCCCCCEEEEEEEEEC
>Mature Secondary Structure
MKKNLLTTAIAASLAFCSFNSLADGPEFYGHVDLSITDSEKGYATQNQKDGTVLENNFSW
CCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEECCCEE
VGVKGSESVSPYFDIIYQMEFGVENFDNSNKTFNARNTFLGVRSVAGTVLAGRNDTVFKA
EEECCCCCCCHHEEEEEEEECCCCCCCCCCCEEECCHHEEEHHHHHCEEEECCCCCEEEE
SEGGFDLFGNTNADIDLLLAGQTRSADGISYYSPKIADLITLNATYLMSDNYDQRDSQGN
CCCCEEEECCCCCCEEEEEECCCCCCCCCEECCCCEEEEEEEEEEEEECCCCCCCCCCCC
EVYNQDQMYALSATLGDKTFKTHNYYVAAAYNDGIENIEAYRGVAQAKFGDFLFGAIYQH
CCCCCCCEEEEEEECCCCEEEECCEEEEEEECCCHHHHHHHHCHHHHHHHHHHHHHHHHH
SEHIDDRFSNLSGETYFVNAAYLMDNLKLKLVYGKDDSGLGKYVSRFVGSQDSGNLEQVS
HHHHHHHHHCCCCCEEEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHC
DVDLQQLTVGADYRLSTKTMVYGHYTRFDGDLMLAGTKQDLDDNVFTVGLRIDF
CCCHHHEEECCCEEEECEEEEEEEEEEECCCEEEEECCCCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA