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The map label for this gene is ydiY [H]

Identifier: 117919152

GI number: 117919152

Start: 817318

End: 818073

Strand: Reverse

Name: ydiY [H]

Synonym: Shewana3_0700

Alternate gene names: 117919152

Gene position: 818073-817318 (Counterclockwise)

Preceding gene: 117919157

Following gene: 117919151

Centisome position: 16.45

GC content: 46.69

Gene sequence:

>756_bases
ATGTTACGAGCAATGCTAAAAGTTATCGCCCCTTTGAGTTTGTTTTGCCTATCTTTTCCGGCACTTGCGCTTGTACCTCC
CGATTATCAGGAACCGCCAAGCGATTTTACTGCAGAAGTCGAAGCCGGCTTACAATTGAACACGGGCAATACCGAGTCGA
GCAGTTTTAATGGTCGCACCCAGCTGATTTACGATGCCAAGCAAACGAAACAAGAAGCCACGCTAAAAGCGTATTTTGCT
TCAGAGAAAAACCAAACCACCTCAGAGAAGTACGAACTCCAGCTGCAGAGCAACTATAAACTCACTAAGGGTTATATCTT
TGGCCGTGGTGACTTTACTTGGGATCAGTTCGGTAGTTATACCCAAATCTCAACCCTTTCTTCGGGTTATGGTTTTAATG
CCATCAGTACCTATAAGACCAAACTCAGCCTCGAAGTCGGTCCGGGTTATCGATACAACCTGCCTGCAGAATCGGTAGCT
GAGCCCGATCCCGCCGCCGAAAAGGATGTGATTTTACGTACTGCGGCAAAGTTTTCGCAAAAATTGCAGGAATACACCAG
CATCAATGCCGATCTCACCGCCGAGGTGGGCGAGAATAACAACACTCTCACCCTCGACATGAACTACAAGAACTTAGTGT
TTCAAGATTGGGCATTTAAAATCGGCATGAACGTCAAGTACACCGAAGTGGTTCCCGAAGGCAGTAAGCAGACTGACACA
GTCACCACCTTTAACCTGCTCTACACCTTTAGATAA

Upstream 100 bases:

>100_bases
GAAACTCAAGCAATAACTTTGCCTCAACCCTCAATACGGGTATGATGACGCCTCACCCCTATTCGGATATCAAACATCAG
CCACTCAAGAACCCAGACTA

Downstream 100 bases:

>100_bases
TCGAGGTACTCAGTGGTTTGGCTGAAACCAGGTTCACCCTCTCAGCCAAATCCCATTTCAGTCGAATTGAGTGACCCACA
CACAAAAATGATAACTCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MLRAMLKVIAPLSLFCLSFPALALVPPDYQEPPSDFTAEVEAGLQLNTGNTESSSFNGRTQLIYDAKQTKQEATLKAYFA
SEKNQTTSEKYELQLQSNYKLTKGYIFGRGDFTWDQFGSYTQISTLSSGYGFNAISTYKTKLSLEVGPGYRYNLPAESVA
EPDPAAEKDVILRTAAKFSQKLQEYTSINADLTAEVGENNNTLTLDMNYKNLVFQDWAFKIGMNVKYTEVVPEGSKQTDT
VTTFNLLYTFR

Sequences:

>Translated_251_residues
MLRAMLKVIAPLSLFCLSFPALALVPPDYQEPPSDFTAEVEAGLQLNTGNTESSSFNGRTQLIYDAKQTKQEATLKAYFA
SEKNQTTSEKYELQLQSNYKLTKGYIFGRGDFTWDQFGSYTQISTLSSGYGFNAISTYKTKLSLEVGPGYRYNLPAESVA
EPDPAAEKDVILRTAAKFSQKLQEYTSINADLTAEVGENNNTLTLDMNYKNLVFQDWAFKIGMNVKYTEVVPEGSKQTDT
VTTFNLLYTFR
>Mature_251_residues
MLRAMLKVIAPLSLFCLSFPALALVPPDYQEPPSDFTAEVEAGLQLNTGNTESSSFNGRTQLIYDAKQTKQEATLKAYFA
SEKNQTTSEKYELQLQSNYKLTKGYIFGRGDFTWDQFGSYTQISTLSSGYGFNAISTYKTKLSLEVGPGYRYNLPAESVA
EPDPAAEKDVILRTAAKFSQKLQEYTSINADLTAEVGENNNTLTLDMNYKNLVFQDWAFKIGMNVKYTEVVPEGSKQTDT
VTTFNLLYTFR

Specific function: Unknown

COG id: COG3137

COG function: function code M; Putative salt-induced outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788016, Length=254, Percent_Identity=25.9842519685039, Blast_Score=68, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007433 [H]

Pfam domain/function: PF04338 DUF481 [H]

EC number: NA

Molecular weight: Translated: 28117; Mature: 28117

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRAMLKVIAPLSLFCLSFPALALVPPDYQEPPSDFTAEVEAGLQLNTGNTESSSFNGRT
CHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEECCEEEECCCCCCCCCCCCE
QLIYDAKQTKQEATLKAYFASEKNQTTSEKYELQLQSNYKLTKGYIFGRGDFTWDQFGSY
EEEECCHHHHHHHHEEEEECCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCCHHHCCCE
TQISTLSSGYGFNAISTYKTKLSLEVGPGYRYNLPAESVAEPDPAAEKDVILRTAAKFSQ
EEEEECCCCCCCCCEEEEEEEEEEEECCCEEECCCHHHCCCCCCCCCHHHHHHHHHHHHH
KLQEYTSINADLTAEVGENNNTLTLDMNYKNLVFQDWAFKIGMNVKYTEVVPEGSKQTDT
HHHHHHCCCCCEEEEECCCCCEEEEEECCCCEEEECEEEEECCCEEEEEECCCCCCCCCE
VTTFNLLYTFR
EEEEEEEEEEC
>Mature Secondary Structure
MLRAMLKVIAPLSLFCLSFPALALVPPDYQEPPSDFTAEVEAGLQLNTGNTESSSFNGRT
CHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEECCEEEECCCCCCCCCCCCE
QLIYDAKQTKQEATLKAYFASEKNQTTSEKYELQLQSNYKLTKGYIFGRGDFTWDQFGSY
EEEECCHHHHHHHHEEEEECCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCCHHHCCCE
TQISTLSSGYGFNAISTYKTKLSLEVGPGYRYNLPAESVAEPDPAAEKDVILRTAAKFSQ
EEEEECCCCCCCCCEEEEEEEEEEEECCCEEECCCHHHCCCCCCCCCHHHHHHHHHHHHH
KLQEYTSINADLTAEVGENNNTLTLDMNYKNLVFQDWAFKIGMNVKYTEVVPEGSKQTDT
HHHHHHCCCCCEEEEECCCCCEEEEEECCCCEEEECEEEEECCCEEEEEECCCCCCCCCE
VTTFNLLYTFR
EEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]