Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

Click here to switch to the map view.

The map label for this gene is 117919016

Identifier: 117919016

GI number: 117919016

Start: 657267

End: 657392

Strand: Reverse

Name: 117919016

Synonym: Shewana3_0563

Alternate gene names: NA

Gene position: 657392-657267 (Counterclockwise)

Preceding gene: 117919023

Following gene: 117919014

Centisome position: 13.22

GC content: 40.48

Gene sequence:

>126_bases
ATGCTAGCATTCTTTCGTGAAAACTTAGGATTAATCTTAGGGATAGTGATTTTCGGCGCAGTAATTTTGGGCGGGATTTA
TTACGTAGAACACTCACTCGAGAGCCAAGAGCAGGTTATCCAATAA

Upstream 100 bases:

>100_bases
AGAGTTATTTAAGATTAGCTTAAGTCAGTAAAACTATGATGTGCCCAGTGTAATACTGGCTAATAAGTCATTCTATTCAA
CCCAGCAAAAGGCAACCCAA

Downstream 100 bases:

>100_bases
CTCAGCCCTAGCCTAAACCAAGTTGAGCCTGTGCGATAACCCCTGCGCGGCTCGACTCGGTTAATCTAACGCCCTCACCT
CTAGCGATACTTTTGCCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 41; Mature: 41

Protein sequence:

>41_residues
MLAFFRENLGLILGIVIFGAVILGGIYYVEHSLESQEQVIQ

Sequences:

>Translated_41_residues
MLAFFRENLGLILGIVIFGAVILGGIYYVEHSLESQEQVIQ
>Mature_41_residues
MLAFFRENLGLILGIVIFGAVILGGIYYVEHSLESQEQVIQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4581; Mature: 4581

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAFFRENLGLILGIVIFGAVILGGIYYVEHSLESQEQVIQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLAFFRENLGLILGIVIFGAVILGGIYYVEHSLESQEQVIQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA