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The map label for this gene is yrfG [H]

Identifier: 117918620

GI number: 117918620

Start: 185630

End: 186292

Strand: Reverse

Name: yrfG [H]

Synonym: Shewana3_0162

Alternate gene names: 117918620

Gene position: 186292-185630 (Counterclockwise)

Preceding gene: 117918633

Following gene: 117918607

Centisome position: 3.75

GC content: 50.68

Gene sequence:

>663_bases
ATGTTTGACTGGAAGAAGATTGATACTGTACTGCTCGATATGGATGGCACCCTGCTCGACCTGCACTTTGATAACCATTT
TTGGTTGAGTCTGGTACCGCAGGAGCTGAGCAAGCAACGGGGATTAAGCCAGAGCCAGGCACAACAACTGGTAGAAGAAG
CCTACGGCAGAGTCGCGGGCACGCTCGACTGGTATTGCCTCGATTATTGGCAATCCGAGTTACAACTCGACATTATGGGG
CTTCACCGTAACTTAGTTGACCGTATTCAGCTGCGCCAAGACAGCATGCCATTTCTCGATGCCCTTGCCGCCGCGGGTAA
AAAACGCATCTTAGTCACCAATGCCCACCCTAAGAGTCTTACGCTTAAGCTGGAGCACACTGAACTGGCAAGCGGCTTAG
ATGCGATGATTTCGAGCCATGAAACAGGTTATCCCAAGGAACACCCACAATTTTGGCAAACGCTATTTGAAAAATTCGCC
CTAGTGCCTGAGCGCTGCCTGTTTATCGATGATAGCGAGCCTATTTTGAATGCAGCGCGCTTAGCGGGCGTAGGTCATCA
GCTCGGGATCTGCAATCCCGATAGCCAGAAACCGACCAAAACCTTCAATGATTTTCCGGCCATTAGCGACTATCGCCTGC
TGTTTGCCGATCTAGCGGGTTAA

Upstream 100 bases:

>100_bases
GACAAAAACGAATTAATCAAGCCTAGCACAAAGTGTCATGCTGACAAGATAGGCTAATGTAAACCTCATTCTGAGCCGAG
TGAACCACACAGGACATCCC

Downstream 100 bases:

>100_bases
TCCTTTAAAAACAAAAGGCACCCTAAGGTGCCTTTATCGAATCAATCACAAACTTACTGAAGATTAGAGCCCAGGAATAC
GCCCCTGATAAACCACAGGG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MFDWKKIDTVLLDMDGTLLDLHFDNHFWLSLVPQELSKQRGLSQSQAQQLVEEAYGRVAGTLDWYCLDYWQSELQLDIMG
LHRNLVDRIQLRQDSMPFLDALAAAGKKRILVTNAHPKSLTLKLEHTELASGLDAMISSHETGYPKEHPQFWQTLFEKFA
LVPERCLFIDDSEPILNAARLAGVGHQLGICNPDSQKPTKTFNDFPAISDYRLLFADLAG

Sequences:

>Translated_220_residues
MFDWKKIDTVLLDMDGTLLDLHFDNHFWLSLVPQELSKQRGLSQSQAQQLVEEAYGRVAGTLDWYCLDYWQSELQLDIMG
LHRNLVDRIQLRQDSMPFLDALAAAGKKRILVTNAHPKSLTLKLEHTELASGLDAMISSHETGYPKEHPQFWQTLFEKFA
LVPERCLFIDDSEPILNAARLAGVGHQLGICNPDSQKPTKTFNDFPAISDYRLLFADLAG
>Mature_220_residues
MFDWKKIDTVLLDMDGTLLDLHFDNHFWLSLVPQELSKQRGLSQSQAQQLVEEAYGRVAGTLDWYCLDYWQSELQLDIMG
LHRNLVDRIQLRQDSMPFLDALAAAGKKRILVTNAHPKSLTLKLEHTELASGLDAMISSHETGYPKEHPQFWQTLFEKFA
LVPERCLFIDDSEPILNAARLAGVGHQLGICNPDSQKPTKTFNDFPAISDYRLLFADLAG

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082259, Length=215, Percent_Identity=49.3023255813954, Blast_Score=219, Evalue=8e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006402
- InterPro:   IPR005833 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 25014; Mature: 25014

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDWKKIDTVLLDMDGTLLDLHFDNHFWLSLVPQELSKQRGLSQSQAQQLVEEAYGRVAG
CCCHHHHCEEEEECCCEEEEEEECCEEEEEECHHHHHHHCCCCHHHHHHHHHHHHHHHCC
TLDWYCLDYWQSELQLDIMGLHRNLVDRIQLRQDSMPFLDALAAAGKKRILVTNAHPKSL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEECCCCCEE
TLKLEHTELASGLDAMISSHETGYPKEHPQFWQTLFEKFALVPERCLFIDDSEPILNAAR
EEEEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHH
LAGVGHQLGICNPDSQKPTKTFNDFPAISDYRLLFADLAG
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHEECCC
>Mature Secondary Structure
MFDWKKIDTVLLDMDGTLLDLHFDNHFWLSLVPQELSKQRGLSQSQAQQLVEEAYGRVAG
CCCHHHHCEEEEECCCEEEEEEECCEEEEEECHHHHHHHCCCCHHHHHHHHHHHHHHHCC
TLDWYCLDYWQSELQLDIMGLHRNLVDRIQLRQDSMPFLDALAAAGKKRILVTNAHPKSL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEECCCCCEE
TLKLEHTELASGLDAMISSHETGYPKEHPQFWQTLFEKFALVPERCLFIDDSEPILNAAR
EEEEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHH
LAGVGHQLGICNPDSQKPTKTFNDFPAISDYRLLFADLAG
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]