Definition Borrelia afzelii PKo plasmid lp60, complete sequence.
Accession NC_008564
Length 59,958

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The map label for this gene is 117621640

Identifier: 117621640

GI number: 117621640

Start: 54670

End: 55425

Strand: Reverse

Name: 117621640

Synonym: BAPKO_2069

Alternate gene names: NA

Gene position: 55425-54670 (Counterclockwise)

Preceding gene: 117621641

Following gene: 117621639

Centisome position: 92.44

GC content: 26.19

Gene sequence:

>756_bases
TTGACAAAAACTAAACTAAATATAATTAAAGTTAACATTGTTGTAATAATATTAACTTTAATTTGCATCTCATGTGCTGT
TGATAAAATAGACCTGGAACAAAAAAACCAAAATTTTGAAAATGCTGATCCTCTAAATAAAAAAAATCAAAATTTTGAAA
ATGCTGATCCTCTAAATAAAAAAAATCAAAAAACTAAAGCCTCAAAATTAGAAACAGCTGCTAAGAACCTGGAAAATCAA
AACAAACAAGAATATATAAAAATAAATGAAATTGATGCTCAAGGAATTAATTTCCTAGCTACTTTTAAAGCTGATGAGAA
GGATAATCTTTCTCAATATGAAGAAATGCAAATCAAAAGAACAATTTATTCATCTTTAAATTACGAAAAACAAAAAATAA
ATACATTAAAAGAAATTCTTGAAACACTTTACAACAAGCTTCAGCACAGGTATACATCTAAAGAATTCATTTATCAAATA
GTAGCAAGTATTCAATACGACATAGATAGGGTTTTATGCTTAATAAAAGAAGCAATAATAAAAGATAACTTGCACACTCA
AAACCAAAAAGAATCCGAATTACTAATGAACCTGGATTCTAGCTTAAAGACAAGACAAAACTTTGCAAAAAAATTAAACG
AAACTATTGACGATTACAATAAAGATTCAAAAAACATTCAAACCAATGTGGACGCATTAGCAACCTATATGAAGGAAAAT
TACAAAACTCTTGATTCTTTTAAGCCTATTAATTAG

Upstream 100 bases:

>100_bases
AAATTAAACTAATATCATTTGACAAGCAAAACAATATAGTTATATTATTATTTTATATTAAAATTAATAAGTATTAATTT
TAATTAATAAGGAGAGTATT

Downstream 100 bases:

>100_bases
CAATAAAAACAAAAAAATACATTGCACTTGATATTTTTTTAAAGAGAAGTTAATTCTTCTCTTTTTTTTACTAACTTAAT
TAGAGTCTAAACCAAAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MTKTKLNIIKVNIVVIILTLICISCAVDKIDLEQKNQNFENADPLNKKNQNFENADPLNKKNQKTKASKLETAAKNLENQ
NKQEYIKINEIDAQGINFLATFKADEKDNLSQYEEMQIKRTIYSSLNYEKQKINTLKEILETLYNKLQHRYTSKEFIYQI
VASIQYDIDRVLCLIKEAIIKDNLHTQNQKESELLMNLDSSLKTRQNFAKKLNETIDDYNKDSKNIQTNVDALATYMKEN
YKTLDSFKPIN

Sequences:

>Translated_251_residues
MTKTKLNIIKVNIVVIILTLICISCAVDKIDLEQKNQNFENADPLNKKNQNFENADPLNKKNQKTKASKLETAAKNLENQ
NKQEYIKINEIDAQGINFLATFKADEKDNLSQYEEMQIKRTIYSSLNYEKQKINTLKEILETLYNKLQHRYTSKEFIYQI
VASIQYDIDRVLCLIKEAIIKDNLHTQNQKESELLMNLDSSLKTRQNFAKKLNETIDDYNKDSKNIQTNVDALATYMKEN
YKTLDSFKPIN
>Mature_250_residues
TKTKLNIIKVNIVVIILTLICISCAVDKIDLEQKNQNFENADPLNKKNQNFENADPLNKKNQKTKASKLETAAKNLENQN
KQEYIKINEIDAQGINFLATFKADEKDNLSQYEEMQIKRTIYSSLNYEKQKINTLKEILETLYNKLQHRYTSKEFIYQIV
ASIQYDIDRVLCLIKEAIIKDNLHTQNQKESELLMNLDSSLKTRQNFAKKLNETIDDYNKDSKNIQTNVDALATYMKENY
KTLDSFKPIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29302; Mature: 29171

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKTKLNIIKVNIVVIILTLICISCAVDKIDLEQKNQNFENADPLNKKNQNFENADPLNK
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
KNQKTKASKLETAAKNLENQNKQEYIKINEIDAQGINFLATFKADEKDNLSQYEEMQIKR
CHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
TIYSSLNYEKQKINTLKEILETLYNKLQHRYTSKEFIYQIVASIQYDIDRVLCLIKEAII
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDNLHTQNQKESELLMNLDSSLKTRQNFAKKLNETIDDYNKDSKNIQTNVDALATYMKEN
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
YKTLDSFKPIN
HHHHHCCCCCC
>Mature Secondary Structure 
TKTKLNIIKVNIVVIILTLICISCAVDKIDLEQKNQNFENADPLNKKNQNFENADPLNK
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
KNQKTKASKLETAAKNLENQNKQEYIKINEIDAQGINFLATFKADEKDNLSQYEEMQIKR
CHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
TIYSSLNYEKQKINTLKEILETLYNKLQHRYTSKEFIYQIVASIQYDIDRVLCLIKEAII
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDNLHTQNQKESELLMNLDSSLKTRQNFAKKLNETIDDYNKDSKNIQTNVDALATYMKEN
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
YKTLDSFKPIN
HHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA