| Definition | Borrelia afzelii PKo plasmid lp60, complete sequence. |
|---|---|
| Accession | NC_008564 |
| Length | 59,958 |
Click here to switch to the map view.
The map label for this gene is 117621639
Identifier: 117621639
GI number: 117621639
Start: 53673
End: 54398
Strand: Reverse
Name: 117621639
Synonym: BAPKO_2068
Alternate gene names: NA
Gene position: 54398-53673 (Counterclockwise)
Preceding gene: 117621640
Following gene: 117621638
Centisome position: 90.73
GC content: 28.65
Gene sequence:
>726_bases TTGACAAAAACCAACCTGAATACAATTAACCTTAATATTGTTACAATAATGTTAGCTTTAATTTGCATTTCATGCACACT TGTTAATAACATTGCTCCTGAATCAAACAGACACACCAATTCAAAAGAAAATAACCAAAATTTATTTCAGGAATCTCAAA AAACTAAAGCCTCAAAATTAGAAATAATTGGCAAGAACTTAGAAGATCAAAACAAACAAGAATATATGGGGATAGCTAAA ATTGACACTGCACATTTTGATTTTCTGGGCACTTTTAAAGCCGATCATTATGATCAGCTTTCCAAATATGAAGAAATAGA AATAAAAAGAATCCTTTACTCATCTTTAAATTACGAAAAACAAAAAATAGAGACATTAAAAGAAATTCTTGAAAAACTTA ACGCAAATCCTAAACACAAACAAACAGCTAAACACTTCATTTATCAAATATCGCCAGCTATTCAATACAAACTAAATATA GATTTATCCTTAATACTAGAAGCAATAAAAGATAAATTACACACTCTAAACCCAAAAAAAGCCGAAGAGCTACTAATGCA AGTAGAATCTGACTTAAAACTAAAACAAAGGTTTGCAGAAACCTTAAACGCAACCCTTGAGGCTTATAATCAAAATTCTC AAAACATTCAATATAATGATGAAGAATTAGCAAAACATATGGATGAAAATTACAAAGACCTTGATTCTTTTAATCCCATT AATTAG
Upstream 100 bases:
>100_bases CTAAAAACAGAGCAAAAATTAGACTTTTAGTAAAGAATAAAACTAATATTCTCGACAAATAAAAAAATATGGTTAAAATA TTAGTTATAAGGAAAGGATT
Downstream 100 bases:
>100_bases TAATCTAAATAAAAAAATACATTGCACTTGATATTTTTTTTAAAAGAGAAGTTAATTCTTCTCTTTTTTTTTTTAACTCG CTTAATCTAGGCTAAAACTA
Product: hypothetical protein
Products: NA
Alternate protein names: Complement Regulator Acquiring; Crasp-1 Outer Surface Protein; Crasp-1ss Outer Surface Protein; Antigen P; Bbcrasp-1 Protein
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MTKTNLNTINLNIVTIMLALICISCTLVNNIAPESNRHTNSKENNQNLFQESQKTKASKLEIIGKNLEDQNKQEYMGIAK IDTAHFDFLGTFKADHYDQLSKYEEIEIKRILYSSLNYEKQKIETLKEILEKLNANPKHKQTAKHFIYQISPAIQYKLNI DLSLILEAIKDKLHTLNPKKAEELLMQVESDLKLKQRFAETLNATLEAYNQNSQNIQYNDEELAKHMDENYKDLDSFNPI N
Sequences:
>Translated_241_residues MTKTNLNTINLNIVTIMLALICISCTLVNNIAPESNRHTNSKENNQNLFQESQKTKASKLEIIGKNLEDQNKQEYMGIAK IDTAHFDFLGTFKADHYDQLSKYEEIEIKRILYSSLNYEKQKIETLKEILEKLNANPKHKQTAKHFIYQISPAIQYKLNI DLSLILEAIKDKLHTLNPKKAEELLMQVESDLKLKQRFAETLNATLEAYNQNSQNIQYNDEELAKHMDENYKDLDSFNPI N >Mature_240_residues TKTNLNTINLNIVTIMLALICISCTLVNNIAPESNRHTNSKENNQNLFQESQKTKASKLEIIGKNLEDQNKQEYMGIAKI DTAHFDFLGTFKADHYDQLSKYEEIEIKRILYSSLNYEKQKIETLKEILEKLNANPKHKQTAKHFIYQISPAIQYKLNID LSLILEAIKDKLHTLNPKKAEELLMQVESDLKLKQRFAETLNATLEAYNQNSQNIQYNDEELAKHMDENYKDLDSFNPIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27994; Mature: 27863
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKTNLNTINLNIVTIMLALICISCTLVNNIAPESNRHTNSKENNQNLFQESQKTKASKL CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH EIIGKNLEDQNKQEYMGIAKIDTAHFDFLGTFKADHYDQLSKYEEIEIKRILYSSLNYEK HHHCCCCCCCCHHHHHCHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH QKIETLKEILEKLNANPKHKQTAKHFIYQISPAIQYKLNIDLSLILEAIKDKLHTLNPKK HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCHHH AEELLMQVESDLKLKQRFAETLNATLEAYNQNSQNIQYNDEELAKHMDENYKDLDSFNPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHCCCCCC N C >Mature Secondary Structure TKTNLNTINLNIVTIMLALICISCTLVNNIAPESNRHTNSKENNQNLFQESQKTKASKL CCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH EIIGKNLEDQNKQEYMGIAKIDTAHFDFLGTFKADHYDQLSKYEEIEIKRILYSSLNYEK HHHCCCCCCCCHHHHHCHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH QKIETLKEILEKLNANPKHKQTAKHFIYQISPAIQYKLNIDLSLILEAIKDKLHTLNPKK HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCHHH AEELLMQVESDLKLKQRFAETLNATLEAYNQNSQNIQYNDEELAKHMDENYKDLDSFNPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHCCCCCC N C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA