Definition Borrelia afzelii PKo plasmid lp60, complete sequence.
Accession NC_008564
Length 59,958

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The map label for this gene is 117621639

Identifier: 117621639

GI number: 117621639

Start: 53673

End: 54398

Strand: Reverse

Name: 117621639

Synonym: BAPKO_2068

Alternate gene names: NA

Gene position: 54398-53673 (Counterclockwise)

Preceding gene: 117621640

Following gene: 117621638

Centisome position: 90.73

GC content: 28.65

Gene sequence:

>726_bases
TTGACAAAAACCAACCTGAATACAATTAACCTTAATATTGTTACAATAATGTTAGCTTTAATTTGCATTTCATGCACACT
TGTTAATAACATTGCTCCTGAATCAAACAGACACACCAATTCAAAAGAAAATAACCAAAATTTATTTCAGGAATCTCAAA
AAACTAAAGCCTCAAAATTAGAAATAATTGGCAAGAACTTAGAAGATCAAAACAAACAAGAATATATGGGGATAGCTAAA
ATTGACACTGCACATTTTGATTTTCTGGGCACTTTTAAAGCCGATCATTATGATCAGCTTTCCAAATATGAAGAAATAGA
AATAAAAAGAATCCTTTACTCATCTTTAAATTACGAAAAACAAAAAATAGAGACATTAAAAGAAATTCTTGAAAAACTTA
ACGCAAATCCTAAACACAAACAAACAGCTAAACACTTCATTTATCAAATATCGCCAGCTATTCAATACAAACTAAATATA
GATTTATCCTTAATACTAGAAGCAATAAAAGATAAATTACACACTCTAAACCCAAAAAAAGCCGAAGAGCTACTAATGCA
AGTAGAATCTGACTTAAAACTAAAACAAAGGTTTGCAGAAACCTTAAACGCAACCCTTGAGGCTTATAATCAAAATTCTC
AAAACATTCAATATAATGATGAAGAATTAGCAAAACATATGGATGAAAATTACAAAGACCTTGATTCTTTTAATCCCATT
AATTAG

Upstream 100 bases:

>100_bases
CTAAAAACAGAGCAAAAATTAGACTTTTAGTAAAGAATAAAACTAATATTCTCGACAAATAAAAAAATATGGTTAAAATA
TTAGTTATAAGGAAAGGATT

Downstream 100 bases:

>100_bases
TAATCTAAATAAAAAAATACATTGCACTTGATATTTTTTTTAAAAGAGAAGTTAATTCTTCTCTTTTTTTTTTTAACTCG
CTTAATCTAGGCTAAAACTA

Product: hypothetical protein

Products: NA

Alternate protein names: Complement Regulator Acquiring; Crasp-1 Outer Surface Protein; Crasp-1ss Outer Surface Protein; Antigen P; Bbcrasp-1 Protein

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MTKTNLNTINLNIVTIMLALICISCTLVNNIAPESNRHTNSKENNQNLFQESQKTKASKLEIIGKNLEDQNKQEYMGIAK
IDTAHFDFLGTFKADHYDQLSKYEEIEIKRILYSSLNYEKQKIETLKEILEKLNANPKHKQTAKHFIYQISPAIQYKLNI
DLSLILEAIKDKLHTLNPKKAEELLMQVESDLKLKQRFAETLNATLEAYNQNSQNIQYNDEELAKHMDENYKDLDSFNPI
N

Sequences:

>Translated_241_residues
MTKTNLNTINLNIVTIMLALICISCTLVNNIAPESNRHTNSKENNQNLFQESQKTKASKLEIIGKNLEDQNKQEYMGIAK
IDTAHFDFLGTFKADHYDQLSKYEEIEIKRILYSSLNYEKQKIETLKEILEKLNANPKHKQTAKHFIYQISPAIQYKLNI
DLSLILEAIKDKLHTLNPKKAEELLMQVESDLKLKQRFAETLNATLEAYNQNSQNIQYNDEELAKHMDENYKDLDSFNPI
N
>Mature_240_residues
TKTNLNTINLNIVTIMLALICISCTLVNNIAPESNRHTNSKENNQNLFQESQKTKASKLEIIGKNLEDQNKQEYMGIAKI
DTAHFDFLGTFKADHYDQLSKYEEIEIKRILYSSLNYEKQKIETLKEILEKLNANPKHKQTAKHFIYQISPAIQYKLNID
LSLILEAIKDKLHTLNPKKAEELLMQVESDLKLKQRFAETLNATLEAYNQNSQNIQYNDEELAKHMDENYKDLDSFNPIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27994; Mature: 27863

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKTNLNTINLNIVTIMLALICISCTLVNNIAPESNRHTNSKENNQNLFQESQKTKASKL
CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
EIIGKNLEDQNKQEYMGIAKIDTAHFDFLGTFKADHYDQLSKYEEIEIKRILYSSLNYEK
HHHCCCCCCCCHHHHHCHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH
QKIETLKEILEKLNANPKHKQTAKHFIYQISPAIQYKLNIDLSLILEAIKDKLHTLNPKK
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCHHH
AEELLMQVESDLKLKQRFAETLNATLEAYNQNSQNIQYNDEELAKHMDENYKDLDSFNPI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHCCCCCC
N
C
>Mature Secondary Structure 
TKTNLNTINLNIVTIMLALICISCTLVNNIAPESNRHTNSKENNQNLFQESQKTKASKL
CCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
EIIGKNLEDQNKQEYMGIAKIDTAHFDFLGTFKADHYDQLSKYEEIEIKRILYSSLNYEK
HHHCCCCCCCCHHHHHCHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH
QKIETLKEILEKLNANPKHKQTAKHFIYQISPAIQYKLNIDLSLILEAIKDKLHTLNPKK
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCHHH
AEELLMQVESDLKLKQRFAETLNATLEAYNQNSQNIQYNDEELAKHMDENYKDLDSFNPI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHCCCCCC
N
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA