| Definition | Borrelia afzelii PKo plasmid lp60, complete sequence. |
|---|---|
| Accession | NC_008564 |
| Length | 59,958 |
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The map label for this gene is 117621632
Identifier: 117621632
GI number: 117621632
Start: 46511
End: 47362
Strand: Reverse
Name: 117621632
Synonym: BAPKO_2061
Alternate gene names: NA
Gene position: 47362-46511 (Counterclockwise)
Preceding gene: 117621633
Following gene: 117621631
Centisome position: 78.99
GC content: 28.17
Gene sequence:
>852_bases TTGAATAATACAAAATTATCAATATTTATAACATTAGGGATACTAATATTGTTCTCTTGTAAGTTAAACTACGAAGATAT TCAAAACAAAGTAGCAAGTTTCACAGAAACTAAATTTGATGAATTAAATCTTCAAAAAGATGCAAAAAAACAAGAACATC AAAGATCAACAAAAGACTTAAAAATTCCCAATAAAGACAAAACAAATCTAACTGACAAGCTCTTTGAAATCTTAGAAAGA GAAACGGCAATAATAAAAAGAGACAAGCTTCAAACAGAAATATCTAGCCAATTTGGACTAAAAAATAGCATGTTTGAACT AATCAATGTTTACAAAACAGATTCTCAAACTGGAGCAAAACTCAAAGAAAAAATGAACTCAAGCCTATTTGAATCTCAAA AAATGAGAAGACAATTTTATTCATCCCTAAGCTACAACACTACTGACATTTTTAATTTAGCAGAGATTGTAAACAAGCTT TACAAGGACCCGAAAGCCCACGACACAATAAAAAATATATCTGGGGGCATACGAATTCAACAAAGATTTGAAGTTGCGCT TGAAGATTTAGCAATTAACATGAATACGCTAAAAGAAAATGCTTTAAATAAAAATACTTTAGAAGAAATTTATGCTGTAA TTGTTGATTTAATCGAAATAAAAAAAGAATGGCTAAATACAATAGAAACATTGATTAAAAGTTCAAACGCTACCTTAGAG CTACAAAACAATATAGAAAAGCTACATGACCATATTCAACAACTATATAAAGATAAGATAATTTCTCTTTGCTTGAAATC CGAGCAAGCATTAATTTCCTTGGACACATTATTTAAATGGAATAATAATTAA
Upstream 100 bases:
>100_bases TTTTATTTTATTGTTCAATTGCAAATTTGAACTAAATTTAAATCATTAAGTATTAATTTTAAATAATTAAAATTACTTAA TTTTTTTAAAGGAGTAAATT
Downstream 100 bases:
>100_bases AAAATTTCTGGGGAACGTAAGACCTTAAACCCAAAGAGAGCGCTGGCTCTCTTTTTTTTTTGATTTTTTTTGCACAATAG CAATTTTGAATTAAAGTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MNNTKLSIFITLGILILFSCKLNYEDIQNKVASFTETKFDELNLQKDAKKQEHQRSTKDLKIPNKDKTNLTDKLFEILER ETAIIKRDKLQTEISSQFGLKNSMFELINVYKTDSQTGAKLKEKMNSSLFESQKMRRQFYSSLSYNTTDIFNLAEIVNKL YKDPKAHDTIKNISGGIRIQQRFEVALEDLAINMNTLKENALNKNTLEEIYAVIVDLIEIKKEWLNTIETLIKSSNATLE LQNNIEKLHDHIQQLYKDKIISLCLKSEQALISLDTLFKWNNN
Sequences:
>Translated_283_residues MNNTKLSIFITLGILILFSCKLNYEDIQNKVASFTETKFDELNLQKDAKKQEHQRSTKDLKIPNKDKTNLTDKLFEILER ETAIIKRDKLQTEISSQFGLKNSMFELINVYKTDSQTGAKLKEKMNSSLFESQKMRRQFYSSLSYNTTDIFNLAEIVNKL YKDPKAHDTIKNISGGIRIQQRFEVALEDLAINMNTLKENALNKNTLEEIYAVIVDLIEIKKEWLNTIETLIKSSNATLE LQNNIEKLHDHIQQLYKDKIISLCLKSEQALISLDTLFKWNNN >Mature_283_residues MNNTKLSIFITLGILILFSCKLNYEDIQNKVASFTETKFDELNLQKDAKKQEHQRSTKDLKIPNKDKTNLTDKLFEILER ETAIIKRDKLQTEISSQFGLKNSMFELINVYKTDSQTGAKLKEKMNSSLFESQKMRRQFYSSLSYNTTDIFNLAEIVNKL YKDPKAHDTIKNISGGIRIQQRFEVALEDLAINMNTLKENALNKNTLEEIYAVIVDLIEIKKEWLNTIETLIKSSNATLE LQNNIEKLHDHIQQLYKDKIISLCLKSEQALISLDTLFKWNNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32907; Mature: 32907
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNTKLSIFITLGILILFSCKLNYEDIQNKVASFTETKFDELNLQKDAKKQEHQRSTKDL CCCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC KIPNKDKTNLTDKLFEILERETAIIKRDKLQTEISSQFGLKNSMFELINVYKTDSQTGAK CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHH LKEKMNSSLFESQKMRRQFYSSLSYNTTDIFNLAEIVNKLYKDPKAHDTIKNISGGIRIQ HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHH QRFEVALEDLAINMNTLKENALNKNTLEEIYAVIVDLIEIKKEWLNTIETLIKSSNATLE HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE LQNNIEKLHDHIQQLYKDKIISLCLKSEQALISLDTLFKWNNN HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC >Mature Secondary Structure MNNTKLSIFITLGILILFSCKLNYEDIQNKVASFTETKFDELNLQKDAKKQEHQRSTKDL CCCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC KIPNKDKTNLTDKLFEILERETAIIKRDKLQTEISSQFGLKNSMFELINVYKTDSQTGAK CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHH LKEKMNSSLFESQKMRRQFYSSLSYNTTDIFNLAEIVNKLYKDPKAHDTIKNISGGIRIQ HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHH QRFEVALEDLAINMNTLKENALNKNTLEEIYAVIVDLIEIKKEWLNTIETLIKSSNATLE HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE LQNNIEKLHDHIQQLYKDKIISLCLKSEQALISLDTLFKWNNN HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA