The gene/protein map for NC_008564 is currently unavailable.
Definition Borrelia afzelii PKo plasmid lp60, complete sequence.
Accession NC_008564
Length 59,958

Click here to switch to the map view.

The map label for this gene is 117621632

Identifier: 117621632

GI number: 117621632

Start: 46511

End: 47362

Strand: Reverse

Name: 117621632

Synonym: BAPKO_2061

Alternate gene names: NA

Gene position: 47362-46511 (Counterclockwise)

Preceding gene: 117621633

Following gene: 117621631

Centisome position: 78.99

GC content: 28.17

Gene sequence:

>852_bases
TTGAATAATACAAAATTATCAATATTTATAACATTAGGGATACTAATATTGTTCTCTTGTAAGTTAAACTACGAAGATAT
TCAAAACAAAGTAGCAAGTTTCACAGAAACTAAATTTGATGAATTAAATCTTCAAAAAGATGCAAAAAAACAAGAACATC
AAAGATCAACAAAAGACTTAAAAATTCCCAATAAAGACAAAACAAATCTAACTGACAAGCTCTTTGAAATCTTAGAAAGA
GAAACGGCAATAATAAAAAGAGACAAGCTTCAAACAGAAATATCTAGCCAATTTGGACTAAAAAATAGCATGTTTGAACT
AATCAATGTTTACAAAACAGATTCTCAAACTGGAGCAAAACTCAAAGAAAAAATGAACTCAAGCCTATTTGAATCTCAAA
AAATGAGAAGACAATTTTATTCATCCCTAAGCTACAACACTACTGACATTTTTAATTTAGCAGAGATTGTAAACAAGCTT
TACAAGGACCCGAAAGCCCACGACACAATAAAAAATATATCTGGGGGCATACGAATTCAACAAAGATTTGAAGTTGCGCT
TGAAGATTTAGCAATTAACATGAATACGCTAAAAGAAAATGCTTTAAATAAAAATACTTTAGAAGAAATTTATGCTGTAA
TTGTTGATTTAATCGAAATAAAAAAAGAATGGCTAAATACAATAGAAACATTGATTAAAAGTTCAAACGCTACCTTAGAG
CTACAAAACAATATAGAAAAGCTACATGACCATATTCAACAACTATATAAAGATAAGATAATTTCTCTTTGCTTGAAATC
CGAGCAAGCATTAATTTCCTTGGACACATTATTTAAATGGAATAATAATTAA

Upstream 100 bases:

>100_bases
TTTTATTTTATTGTTCAATTGCAAATTTGAACTAAATTTAAATCATTAAGTATTAATTTTAAATAATTAAAATTACTTAA
TTTTTTTAAAGGAGTAAATT

Downstream 100 bases:

>100_bases
AAAATTTCTGGGGAACGTAAGACCTTAAACCCAAAGAGAGCGCTGGCTCTCTTTTTTTTTTGATTTTTTTTGCACAATAG
CAATTTTGAATTAAAGTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MNNTKLSIFITLGILILFSCKLNYEDIQNKVASFTETKFDELNLQKDAKKQEHQRSTKDLKIPNKDKTNLTDKLFEILER
ETAIIKRDKLQTEISSQFGLKNSMFELINVYKTDSQTGAKLKEKMNSSLFESQKMRRQFYSSLSYNTTDIFNLAEIVNKL
YKDPKAHDTIKNISGGIRIQQRFEVALEDLAINMNTLKENALNKNTLEEIYAVIVDLIEIKKEWLNTIETLIKSSNATLE
LQNNIEKLHDHIQQLYKDKIISLCLKSEQALISLDTLFKWNNN

Sequences:

>Translated_283_residues
MNNTKLSIFITLGILILFSCKLNYEDIQNKVASFTETKFDELNLQKDAKKQEHQRSTKDLKIPNKDKTNLTDKLFEILER
ETAIIKRDKLQTEISSQFGLKNSMFELINVYKTDSQTGAKLKEKMNSSLFESQKMRRQFYSSLSYNTTDIFNLAEIVNKL
YKDPKAHDTIKNISGGIRIQQRFEVALEDLAINMNTLKENALNKNTLEEIYAVIVDLIEIKKEWLNTIETLIKSSNATLE
LQNNIEKLHDHIQQLYKDKIISLCLKSEQALISLDTLFKWNNN
>Mature_283_residues
MNNTKLSIFITLGILILFSCKLNYEDIQNKVASFTETKFDELNLQKDAKKQEHQRSTKDLKIPNKDKTNLTDKLFEILER
ETAIIKRDKLQTEISSQFGLKNSMFELINVYKTDSQTGAKLKEKMNSSLFESQKMRRQFYSSLSYNTTDIFNLAEIVNKL
YKDPKAHDTIKNISGGIRIQQRFEVALEDLAINMNTLKENALNKNTLEEIYAVIVDLIEIKKEWLNTIETLIKSSNATLE
LQNNIEKLHDHIQQLYKDKIISLCLKSEQALISLDTLFKWNNN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32907; Mature: 32907

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNTKLSIFITLGILILFSCKLNYEDIQNKVASFTETKFDELNLQKDAKKQEHQRSTKDL
CCCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
KIPNKDKTNLTDKLFEILERETAIIKRDKLQTEISSQFGLKNSMFELINVYKTDSQTGAK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHH
LKEKMNSSLFESQKMRRQFYSSLSYNTTDIFNLAEIVNKLYKDPKAHDTIKNISGGIRIQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHH
QRFEVALEDLAINMNTLKENALNKNTLEEIYAVIVDLIEIKKEWLNTIETLIKSSNATLE
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
LQNNIEKLHDHIQQLYKDKIISLCLKSEQALISLDTLFKWNNN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNNTKLSIFITLGILILFSCKLNYEDIQNKVASFTETKFDELNLQKDAKKQEHQRSTKDL
CCCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
KIPNKDKTNLTDKLFEILERETAIIKRDKLQTEISSQFGLKNSMFELINVYKTDSQTGAK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHH
LKEKMNSSLFESQKMRRQFYSSLSYNTTDIFNLAEIVNKLYKDPKAHDTIKNISGGIRIQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHH
QRFEVALEDLAINMNTLKENALNKNTLEEIYAVIVDLIEIKKEWLNTIETLIKSSNATLE
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
LQNNIEKLHDHIQQLYKDKIISLCLKSEQALISLDTLFKWNNN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA