Definition Borrelia afzelii PKo plasmid lp60, complete sequence.
Accession NC_008564
Length 59,958

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The map label for this gene is 117621633

Identifier: 117621633

GI number: 117621633

Start: 47529

End: 48776

Strand: Reverse

Name: 117621633

Synonym: BAPKO_2062

Alternate gene names: NA

Gene position: 48776-47529 (Counterclockwise)

Preceding gene: 117621634

Following gene: 117621632

Centisome position: 81.35

GC content: 31.57

Gene sequence:

>1248_bases
TTGAATATTAAATCATTAATACATTTAAAGTTCATAGCCTTGTTTTTGTCTTCTTGCACGATTGATGCTAATCTAAACGA
AGATTATAAAAATAAAGTAGAAGAACTTCTCAATAGTACAACAGATGATCAAACAACAATAGGTATTAAAACAAACTCAA
ATGCTGCTAAAAACAAAACAAACACTAATAAAGCAGCAGCACAAGTAGCGGGGCTACAAAAACAACCAGAATTAAAAGAC
AAAAGTTTACATATTGTGCATCACAACGTAAATCCAGCAAATCCAGCAAATCGGGTAAATCGAGTAAACCAAGCAAGTCA
ACCAAGGGAGAGTATTAGAAATGTACCAACAAAAGCACAAAGCACACCGCTAAAACAAATAGCACCTACCCCAACCGTTA
CAACTGCACGCAAAGGTGTAAAAACTACTCCTACTAGAGGATTAAGATTTGGACAAACTAGAAAATATGCCCTTAATCAC
GGTTCAAGCCAATCAAACTTTAATAATCTACAAAACAATAATTCTTCTATAATTTTCAAACAAGCTCAACCAAGCTTTAT
TCAAACATCTTCTACTATTAGTCAATCACTAGCGTCAAAAAATGACCTTCTTAGAAGAATTAATGAAGAAAAAAACAAAA
TACAAAACAATAATGGATTTAGAGAAACTTACGATCAATTTAAAATGAAAGACTCTGCATTTGAGCTATTAGATGTTATT
TCAAATATTTCAGTTTTTGATCGAAGTTACGCACCACAGCTTAACTCAAACACACCAGAAGCAGAAAATGAAAGAAATAA
ATTTTATGCAATTATGGATTTTGATCAATCAAAAACCACACAATTTGGATCAATAATGGAAATTCTTTACCAAGAGAATC
AAAATCACAGCTTAATCAGATCATTAATAATATCAGGACTTGGAATACAAATTTCTTTAGAGCATTCACTAGAAGAGTTA
GGGAAAAAAATTGAAATCTTTAGCCAAGAGTATTCAAACAATAGAATTAGCCGCTTTGACTTTGACGCTAAAATGAAAGA
GCTTGACTCCAAATTAAACCAAATATTAATTGAAAGAAATGAATGGTCAAAACAAGTTGACGCTCTAATTACCAATGTAA
GCTCTAATACAAGCCTAAGCGATTCTAATACTTTAGCGCAATACATTCAAAACAGATATTTAGATAGAATGGAAAGTTCT
CGCGAGGCTGTTCTTGAATTATACATTAGTATAACAGAATTTAAATAG

Upstream 100 bases:

>100_bases
TCTTAATTTGCACTAAGTTTTTATTAATTAGTAATTAATTTTAAATTTTAATTAATTTTAATTATTAAAATTCATTAAAA
ATAAATCGAGGAATAATATT

Downstream 100 bases:

>100_bases
ATTATTTAAAAAACGAAAATAAACTATTTTACAACTATTTAATCAAAGAAGAGAGTCAATCTCTTCTTTTATTTTATTGT
TCAATTGCAAATTTGAACTA

Product: antigen, P35, putative

Products: NA

Alternate protein names: Antigen

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MNIKSLIHLKFIALFLSSCTIDANLNEDYKNKVEELLNSTTDDQTTIGIKTNSNAAKNKTNTNKAAAQVAGLQKQPELKD
KSLHIVHHNVNPANPANRVNRVNQASQPRESIRNVPTKAQSTPLKQIAPTPTVTTARKGVKTTPTRGLRFGQTRKYALNH
GSSQSNFNNLQNNNSSIIFKQAQPSFIQTSSTISQSLASKNDLLRRINEEKNKIQNNNGFRETYDQFKMKDSAFELLDVI
SNISVFDRSYAPQLNSNTPEAENERNKFYAIMDFDQSKTTQFGSIMEILYQENQNHSLIRSLIISGLGIQISLEHSLEEL
GKKIEIFSQEYSNNRISRFDFDAKMKELDSKLNQILIERNEWSKQVDALITNVSSNTSLSDSNTLAQYIQNRYLDRMESS
REAVLELYISITEFK

Sequences:

>Translated_415_residues
MNIKSLIHLKFIALFLSSCTIDANLNEDYKNKVEELLNSTTDDQTTIGIKTNSNAAKNKTNTNKAAAQVAGLQKQPELKD
KSLHIVHHNVNPANPANRVNRVNQASQPRESIRNVPTKAQSTPLKQIAPTPTVTTARKGVKTTPTRGLRFGQTRKYALNH
GSSQSNFNNLQNNNSSIIFKQAQPSFIQTSSTISQSLASKNDLLRRINEEKNKIQNNNGFRETYDQFKMKDSAFELLDVI
SNISVFDRSYAPQLNSNTPEAENERNKFYAIMDFDQSKTTQFGSIMEILYQENQNHSLIRSLIISGLGIQISLEHSLEEL
GKKIEIFSQEYSNNRISRFDFDAKMKELDSKLNQILIERNEWSKQVDALITNVSSNTSLSDSNTLAQYIQNRYLDRMESS
REAVLELYISITEFK
>Mature_415_residues
MNIKSLIHLKFIALFLSSCTIDANLNEDYKNKVEELLNSTTDDQTTIGIKTNSNAAKNKTNTNKAAAQVAGLQKQPELKD
KSLHIVHHNVNPANPANRVNRVNQASQPRESIRNVPTKAQSTPLKQIAPTPTVTTARKGVKTTPTRGLRFGQTRKYALNH
GSSQSNFNNLQNNNSSIIFKQAQPSFIQTSSTISQSLASKNDLLRRINEEKNKIQNNNGFRETYDQFKMKDSAFELLDVI
SNISVFDRSYAPQLNSNTPEAENERNKFYAIMDFDQSKTTQFGSIMEILYQENQNHSLIRSLIISGLGIQISLEHSLEEL
GKKIEIFSQEYSNNRISRFDFDAKMKELDSKLNQILIERNEWSKQVDALITNVSSNTSLSDSNTLAQYIQNRYLDRMESS
REAVLELYISITEFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47065; Mature: 47065

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIKSLIHLKFIALFLSSCTIDANLNEDYKNKVEELLNSTTDDQTTIGIKTNSNAAKNKT
CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCC
NTNKAAAQVAGLQKQPELKDKSLHIVHHNVNPANPANRVNRVNQASQPRESIRNVPTKAQ
CCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCC
STPLKQIAPTPTVTTARKGVKTTPTRGLRFGQTRKYALNHGSSQSNFNNLQNNNSSIIFK
CCCHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHCCCCCEEEEE
QAQPSFIQTSSTISQSLASKNDLLRRINEEKNKIQNNNGFRETYDQFKMKDSAFELLDVI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
SNISVFDRSYAPQLNSNTPEAENERNKFYAIMDFDQSKTTQFGSIMEILYQENQNHSLIR
HHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHH
SLIISGLGIQISLEHSLEELGKKIEIFSQEYSNNRISRFDFDAKMKELDSKLNQILIERN
HHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHCH
EWSKQVDALITNVSSNTSLSDSNTLAQYIQNRYLDRMESSREAVLELYISITEFK
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNIKSLIHLKFIALFLSSCTIDANLNEDYKNKVEELLNSTTDDQTTIGIKTNSNAAKNKT
CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCC
NTNKAAAQVAGLQKQPELKDKSLHIVHHNVNPANPANRVNRVNQASQPRESIRNVPTKAQ
CCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCC
STPLKQIAPTPTVTTARKGVKTTPTRGLRFGQTRKYALNHGSSQSNFNNLQNNNSSIIFK
CCCHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHCCCCCEEEEE
QAQPSFIQTSSTISQSLASKNDLLRRINEEKNKIQNNNGFRETYDQFKMKDSAFELLDVI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
SNISVFDRSYAPQLNSNTPEAENERNKFYAIMDFDQSKTTQFGSIMEILYQENQNHSLIR
HHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHH
SLIISGLGIQISLEHSLEELGKKIEIFSQEYSNNRISRFDFDAKMKELDSKLNQILIERN
HHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHCH
EWSKQVDALITNVSSNTSLSDSNTLAQYIQNRYLDRMESSREAVLELYISITEFK
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA