| Definition | Borrelia afzelii PKo plasmid lp60, complete sequence. |
|---|---|
| Accession | NC_008564 |
| Length | 59,958 |
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The map label for this gene is 117621633
Identifier: 117621633
GI number: 117621633
Start: 47529
End: 48776
Strand: Reverse
Name: 117621633
Synonym: BAPKO_2062
Alternate gene names: NA
Gene position: 48776-47529 (Counterclockwise)
Preceding gene: 117621634
Following gene: 117621632
Centisome position: 81.35
GC content: 31.57
Gene sequence:
>1248_bases TTGAATATTAAATCATTAATACATTTAAAGTTCATAGCCTTGTTTTTGTCTTCTTGCACGATTGATGCTAATCTAAACGA AGATTATAAAAATAAAGTAGAAGAACTTCTCAATAGTACAACAGATGATCAAACAACAATAGGTATTAAAACAAACTCAA ATGCTGCTAAAAACAAAACAAACACTAATAAAGCAGCAGCACAAGTAGCGGGGCTACAAAAACAACCAGAATTAAAAGAC AAAAGTTTACATATTGTGCATCACAACGTAAATCCAGCAAATCCAGCAAATCGGGTAAATCGAGTAAACCAAGCAAGTCA ACCAAGGGAGAGTATTAGAAATGTACCAACAAAAGCACAAAGCACACCGCTAAAACAAATAGCACCTACCCCAACCGTTA CAACTGCACGCAAAGGTGTAAAAACTACTCCTACTAGAGGATTAAGATTTGGACAAACTAGAAAATATGCCCTTAATCAC GGTTCAAGCCAATCAAACTTTAATAATCTACAAAACAATAATTCTTCTATAATTTTCAAACAAGCTCAACCAAGCTTTAT TCAAACATCTTCTACTATTAGTCAATCACTAGCGTCAAAAAATGACCTTCTTAGAAGAATTAATGAAGAAAAAAACAAAA TACAAAACAATAATGGATTTAGAGAAACTTACGATCAATTTAAAATGAAAGACTCTGCATTTGAGCTATTAGATGTTATT TCAAATATTTCAGTTTTTGATCGAAGTTACGCACCACAGCTTAACTCAAACACACCAGAAGCAGAAAATGAAAGAAATAA ATTTTATGCAATTATGGATTTTGATCAATCAAAAACCACACAATTTGGATCAATAATGGAAATTCTTTACCAAGAGAATC AAAATCACAGCTTAATCAGATCATTAATAATATCAGGACTTGGAATACAAATTTCTTTAGAGCATTCACTAGAAGAGTTA GGGAAAAAAATTGAAATCTTTAGCCAAGAGTATTCAAACAATAGAATTAGCCGCTTTGACTTTGACGCTAAAATGAAAGA GCTTGACTCCAAATTAAACCAAATATTAATTGAAAGAAATGAATGGTCAAAACAAGTTGACGCTCTAATTACCAATGTAA GCTCTAATACAAGCCTAAGCGATTCTAATACTTTAGCGCAATACATTCAAAACAGATATTTAGATAGAATGGAAAGTTCT CGCGAGGCTGTTCTTGAATTATACATTAGTATAACAGAATTTAAATAG
Upstream 100 bases:
>100_bases TCTTAATTTGCACTAAGTTTTTATTAATTAGTAATTAATTTTAAATTTTAATTAATTTTAATTATTAAAATTCATTAAAA ATAAATCGAGGAATAATATT
Downstream 100 bases:
>100_bases ATTATTTAAAAAACGAAAATAAACTATTTTACAACTATTTAATCAAAGAAGAGAGTCAATCTCTTCTTTTATTTTATTGT TCAATTGCAAATTTGAACTA
Product: antigen, P35, putative
Products: NA
Alternate protein names: Antigen
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MNIKSLIHLKFIALFLSSCTIDANLNEDYKNKVEELLNSTTDDQTTIGIKTNSNAAKNKTNTNKAAAQVAGLQKQPELKD KSLHIVHHNVNPANPANRVNRVNQASQPRESIRNVPTKAQSTPLKQIAPTPTVTTARKGVKTTPTRGLRFGQTRKYALNH GSSQSNFNNLQNNNSSIIFKQAQPSFIQTSSTISQSLASKNDLLRRINEEKNKIQNNNGFRETYDQFKMKDSAFELLDVI SNISVFDRSYAPQLNSNTPEAENERNKFYAIMDFDQSKTTQFGSIMEILYQENQNHSLIRSLIISGLGIQISLEHSLEEL GKKIEIFSQEYSNNRISRFDFDAKMKELDSKLNQILIERNEWSKQVDALITNVSSNTSLSDSNTLAQYIQNRYLDRMESS REAVLELYISITEFK
Sequences:
>Translated_415_residues MNIKSLIHLKFIALFLSSCTIDANLNEDYKNKVEELLNSTTDDQTTIGIKTNSNAAKNKTNTNKAAAQVAGLQKQPELKD KSLHIVHHNVNPANPANRVNRVNQASQPRESIRNVPTKAQSTPLKQIAPTPTVTTARKGVKTTPTRGLRFGQTRKYALNH GSSQSNFNNLQNNNSSIIFKQAQPSFIQTSSTISQSLASKNDLLRRINEEKNKIQNNNGFRETYDQFKMKDSAFELLDVI SNISVFDRSYAPQLNSNTPEAENERNKFYAIMDFDQSKTTQFGSIMEILYQENQNHSLIRSLIISGLGIQISLEHSLEEL GKKIEIFSQEYSNNRISRFDFDAKMKELDSKLNQILIERNEWSKQVDALITNVSSNTSLSDSNTLAQYIQNRYLDRMESS REAVLELYISITEFK >Mature_415_residues MNIKSLIHLKFIALFLSSCTIDANLNEDYKNKVEELLNSTTDDQTTIGIKTNSNAAKNKTNTNKAAAQVAGLQKQPELKD KSLHIVHHNVNPANPANRVNRVNQASQPRESIRNVPTKAQSTPLKQIAPTPTVTTARKGVKTTPTRGLRFGQTRKYALNH GSSQSNFNNLQNNNSSIIFKQAQPSFIQTSSTISQSLASKNDLLRRINEEKNKIQNNNGFRETYDQFKMKDSAFELLDVI SNISVFDRSYAPQLNSNTPEAENERNKFYAIMDFDQSKTTQFGSIMEILYQENQNHSLIRSLIISGLGIQISLEHSLEEL GKKIEIFSQEYSNNRISRFDFDAKMKELDSKLNQILIERNEWSKQVDALITNVSSNTSLSDSNTLAQYIQNRYLDRMESS REAVLELYISITEFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47065; Mature: 47065
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIKSLIHLKFIALFLSSCTIDANLNEDYKNKVEELLNSTTDDQTTIGIKTNSNAAKNKT CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCC NTNKAAAQVAGLQKQPELKDKSLHIVHHNVNPANPANRVNRVNQASQPRESIRNVPTKAQ CCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCC STPLKQIAPTPTVTTARKGVKTTPTRGLRFGQTRKYALNHGSSQSNFNNLQNNNSSIIFK CCCHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHCCCCCEEEEE QAQPSFIQTSSTISQSLASKNDLLRRINEEKNKIQNNNGFRETYDQFKMKDSAFELLDVI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH SNISVFDRSYAPQLNSNTPEAENERNKFYAIMDFDQSKTTQFGSIMEILYQENQNHSLIR HHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHH SLIISGLGIQISLEHSLEELGKKIEIFSQEYSNNRISRFDFDAKMKELDSKLNQILIERN HHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHCH EWSKQVDALITNVSSNTSLSDSNTLAQYIQNRYLDRMESSREAVLELYISITEFK HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNIKSLIHLKFIALFLSSCTIDANLNEDYKNKVEELLNSTTDDQTTIGIKTNSNAAKNKT CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCC NTNKAAAQVAGLQKQPELKDKSLHIVHHNVNPANPANRVNRVNQASQPRESIRNVPTKAQ CCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCC STPLKQIAPTPTVTTARKGVKTTPTRGLRFGQTRKYALNHGSSQSNFNNLQNNNSSIIFK CCCHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHCCCCCEEEEE QAQPSFIQTSSTISQSLASKNDLLRRINEEKNKIQNNNGFRETYDQFKMKDSAFELLDVI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH SNISVFDRSYAPQLNSNTPEAENERNKFYAIMDFDQSKTTQFGSIMEILYQENQNHSLIR HHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHH SLIISGLGIQISLEHSLEELGKKIEIFSQEYSNNRISRFDFDAKMKELDSKLNQILIERN HHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHCH EWSKQVDALITNVSSNTSLSDSNTLAQYIQNRYLDRMESSREAVLELYISITEFK HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA