| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is yuxJ [H]
Identifier: 116873742
GI number: 116873742
Start: 2371587
End: 2372798
Strand: Direct
Name: yuxJ [H]
Synonym: lwe2326
Alternate gene names: 116873742
Gene position: 2371587-2372798 (Clockwise)
Preceding gene: 116873739
Following gene: 116873743
Centisome position: 84.27
GC content: 38.78
Gene sequence:
>1212_bases ATGACAACTCGAACAAGGAATTTATACATCTTAATGTTGGCAAATTTGCTGATGTCAGCCAGTATGACAATGATTATGCC ATTTTTATCTCTCTACATTGAAACATTTGGTGATTATAGCAATGCGTACGTGCAAAGGTGGGCCGGATACATTTTTGGCG TGACATTTTTAATTGCATTTATATTTTCACCGATTTGGGGACGTATTGGCGATAAGCACGGTTATAAAGGTATTTTGATT TTGACTTCGGTCGGTTTATCCATTTGTATTTTTTTGATGGGATTTGCGCATTCAGTCACTTACTTACTTATTTTGCGGAT TTTCATGGGTGTAGTAACAGGTTTTATTGGTGTGAGTAATGCCTTTATTGCGCGTCAAACACCTCGTAATGAAGCTGGGA AAATTCTTGGTACATTGCAACTAGGTGGGGTTACCGGTATGCTATTTGGTCCACTTATTGGTGGCGCGATGGCGGATTTA TTTGGATTTAAAGATACTTTTACGATAACGGGGATTGCAATGATGGTTGCGGCTTTGCTTGTTGCTTTTGGTGTAAAAGA AATCCGAACAGAAGAGCAAAAAGAAGCTGCCAAAGTAGTATATTCTCGCCGTGCGGTTTTAAAACAAATTTTTACGCTTC GTGTTCTTTTTACCGTGATGGTCATTACAGCGCTTATCCAAATTGCAAACTTTAGTGTTCAACCGCTTCTTGCACTTTAT GTAGGCGATATGACAAATTCAAATAACATTGCGTTCTTATCAGGTTTGGCCTTTTCTGCGACTGGCTTTGGGAATTTAGT GATGACACGGAAATGGGGACAACTTGGTGATAAATACGGGTATGAAAAGATTTTAAATATCCTATTAATTATGGCAGCAG TTTTTGTAATACCGCAAGCTTTCGCCACAAATCTATGGGTATTTGTTTTCTTCCGCTTTTTATTTGGTATTGCGATTGGC GGAATGGTGCCTTGTACAACAGCATATATTCGACTGGCAGCTCCAGGTGTCATGCAAGGTGAAATGCTAGGTTATAATCA AAGCGCTCGTTTTCTAGGGAATGTTATTGGACCTATTCTTGGTGGTACTCTCGCTGGTTATACAGGCATTCCAAGCGTTT TCCTATTTATGAGTTTTATGTTTCTACTTGCATTTTTCATTTTACTTTACGCACTTCATTCTGACCGAAAACGGCATGTT AATGTTGATTAA
Upstream 100 bases:
>100_bases CCAAAAATGCACATCCTTCACTTTATTTTTCATTCGCTCCCTTTTATTCTATAATGAAAAGGACAGTTTTAACAATAATA CGAATAGAGATGATTCTTTT
Downstream 100 bases:
>100_bases TCAAAGTAAACCTAAGTTTTTTTCTTAGGTTTATTTTTTTCTTCTTCCTATTTAACTATTTTTTAAAATTGTAGAAATTG ATTTATAAAGTTAAGTTTCC
Product: major facilitator family transporter
Products: Proton [Cytoplasm]; drug [Periplasm] [C]
Alternate protein names: ORF1 [H]
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MTTRTRNLYILMLANLLMSASMTMIMPFLSLYIETFGDYSNAYVQRWAGYIFGVTFLIAFIFSPIWGRIGDKHGYKGILI LTSVGLSICIFLMGFAHSVTYLLILRIFMGVVTGFIGVSNAFIARQTPRNEAGKILGTLQLGGVTGMLFGPLIGGAMADL FGFKDTFTITGIAMMVAALLVAFGVKEIRTEEQKEAAKVVYSRRAVLKQIFTLRVLFTVMVITALIQIANFSVQPLLALY VGDMTNSNNIAFLSGLAFSATGFGNLVMTRKWGQLGDKYGYEKILNILLIMAAVFVIPQAFATNLWVFVFFRFLFGIAIG GMVPCTTAYIRLAAPGVMQGEMLGYNQSARFLGNVIGPILGGTLAGYTGIPSVFLFMSFMFLLAFFILLYALHSDRKRHV NVD
Sequences:
>Translated_403_residues MTTRTRNLYILMLANLLMSASMTMIMPFLSLYIETFGDYSNAYVQRWAGYIFGVTFLIAFIFSPIWGRIGDKHGYKGILI LTSVGLSICIFLMGFAHSVTYLLILRIFMGVVTGFIGVSNAFIARQTPRNEAGKILGTLQLGGVTGMLFGPLIGGAMADL FGFKDTFTITGIAMMVAALLVAFGVKEIRTEEQKEAAKVVYSRRAVLKQIFTLRVLFTVMVITALIQIANFSVQPLLALY VGDMTNSNNIAFLSGLAFSATGFGNLVMTRKWGQLGDKYGYEKILNILLIMAAVFVIPQAFATNLWVFVFFRFLFGIAIG GMVPCTTAYIRLAAPGVMQGEMLGYNQSARFLGNVIGPILGGTLAGYTGIPSVFLFMSFMFLLAFFILLYALHSDRKRHV NVD >Mature_402_residues TTRTRNLYILMLANLLMSASMTMIMPFLSLYIETFGDYSNAYVQRWAGYIFGVTFLIAFIFSPIWGRIGDKHGYKGILIL TSVGLSICIFLMGFAHSVTYLLILRIFMGVVTGFIGVSNAFIARQTPRNEAGKILGTLQLGGVTGMLFGPLIGGAMADLF GFKDTFTITGIAMMVAALLVAFGVKEIRTEEQKEAAKVVYSRRAVLKQIFTLRVLFTVMVITALIQIANFSVQPLLALYV GDMTNSNNIAFLSGLAFSATGFGNLVMTRKWGQLGDKYGYEKILNILLIMAAVFVIPQAFATNLWVFVFFRFLFGIAIGG MVPCTTAYIRLAAPGVMQGEMLGYNQSARFLGNVIGPILGGTLAGYTGIPSVFLFMSFMFLLAFFILLYALHSDRKRHVN VD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI1787291, Length=396, Percent_Identity=34.8484848484849, Blast_Score=232, Evalue=4e-62, Organism=Escherichia coli, GI87082404, Length=347, Percent_Identity=26.2247838616715, Blast_Score=63, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6319871, Length=151, Percent_Identity=27.8145695364238, Blast_Score=63, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR001958 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 44330; Mature: 44199
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRTRNLYILMLANLLMSASMTMIMPFLSLYIETFGDYSNAYVQRWAGYIFGVTFLIAF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH IFSPIWGRIGDKHGYKGILILTSVGLSICIFLMGFAHSVTYLLILRIFMGVVTGFIGVSN HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AFIARQTPRNEAGKILGTLQLGGVTGMLFGPLIGGAMADLFGFKDTFTITGIAMMVAALL HHHCCCCCCCCHHHEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH VAFGVKEIRTEEQKEAAKVVYSRRAVLKQIFTLRVLFTVMVITALIQIANFSVQPLLALY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH VGDMTNSNNIAFLSGLAFSATGFGNLVMTRKWGQLGDKYGYEKILNILLIMAAVFVIPQA HHCCCCCCCEEEEECCHHHCCCCCCHHEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH FATNLWVFVFFRFLFGIAIGGMVPCTTAYIRLAAPGVMQGEMLGYNQSARFLGNVIGPIL HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH GGTLAGYTGIPSVFLFMSFMFLLAFFILLYALHSDRKRHVNVD CCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TTRTRNLYILMLANLLMSASMTMIMPFLSLYIETFGDYSNAYVQRWAGYIFGVTFLIAF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH IFSPIWGRIGDKHGYKGILILTSVGLSICIFLMGFAHSVTYLLILRIFMGVVTGFIGVSN HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AFIARQTPRNEAGKILGTLQLGGVTGMLFGPLIGGAMADLFGFKDTFTITGIAMMVAALL HHHCCCCCCCCHHHEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH VAFGVKEIRTEEQKEAAKVVYSRRAVLKQIFTLRVLFTVMVITALIQIANFSVQPLLALY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH VGDMTNSNNIAFLSGLAFSATGFGNLVMTRKWGQLGDKYGYEKILNILLIMAAVFVIPQA HHCCCCCCCEEEEECCHHHCCCCCCHHEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH FATNLWVFVFFRFLFGIAIGGMVPCTTAYIRLAAPGVMQGEMLGYNQSARFLGNVIGPIL HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH GGTLAGYTGIPSVFLFMSFMFLLAFFILLYALHSDRKRHVNVD CCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; drug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + drug [Cytoplasm] = Proton [Cytoplasm] + drug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377; 10568751; 7961491 [H]