| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is tagF [H]
Identifier: 116872480
GI number: 116872480
Start: 1085836
End: 1086990
Strand: Direct
Name: tagF [H]
Synonym: lwe1064
Alternate gene names: 116872480
Gene position: 1085836-1086990 (Clockwise)
Preceding gene: 116872479
Following gene: 116872481
Centisome position: 38.59
GC content: 32.73
Gene sequence:
>1155_bases ATGAAATTCGTACAAAAAATATATTATTTACTCTTTAGATTAGTAGGATTTTTACCTCGAAAAAAAGAGTTAGTTATGTT TGAAAGTTTTTCAGGCAAACAATATAGTTGTAATCCACGAGCGATTTTTGAATATATGGAGGAGCATAATCCGGAATATG AATTACTCTGGAGTGTAAATCCAAAATATGTTGGACTTTTTGAAGAGCATGGTGTGCCTTATGTAAAACGTTTTTCTGTA AGTTGGTTATTCAAAATGGGACTCGCAAAATACTGGATTTCGAATAGCAGACTTCCGTTAGAACTACCGAAACCCAAAAA AACAATCTATGTCCAAACATGGCATGGTACACCATTAAAAAAATTAGGTGTCGATATCGATGAAGTCCATATGCCAGGAC AAACAACAGAACAATATAAAACTGATTTTGTTAAAGAAGCAAAGAAATGGGATTATTTAATTTCCCCTAATGCTTATTCT AGCGTCATTTTTAGGCGAGCATTTGGTTTTACTGGCGAAATGATTGAATCTGGCTATCCACGAAATGATATATTATTTAG TTCAAAGAAAGAAGAGAAAATTGCTGCCATAAAAAACGAATTAAACATTCCAGCTGACAAAAAAGTTATATTATATGCCC CAACATGGCGCGATAATGACTTTTATGAAGTTGGTAAGTACAAATTCGATTTAAAAATTGATATAGCTAAAATGAGAGAA AAATTTGGGGATGAGATTATTTTACTTGTCCGGATGCATTATTTAGTTGCGGAACATTTTGATTTTGGTCAATATGGTGA TTTTATTCGAGACACTTCTAATCATGAAGATATTAGAGATTTATATTTAGTAAGTGATTTATTGATTACTGATTACTCTT CCGTATTTTTTGATTATGCTAATTTAAAACGTCCAATGTTGTTTTATACTTATGACTTAGCGGAGTACCGAGACACCCTT CGAGGATTTTATTTTGATTTCGAAAAAAATGCTCCTGGGCCGCTTGTTGAAACTAACGAAGCACTTATGGACGAACTTGG AAAAATGCTTGAAAATCCGCCCCAAATAAAAGAAAGTTTTTTAGAACAGTTTTGTACTTGGGAAGATGGTCATGCGGCAG AAAAAACCGTAAAAACAGTTTTTGCTAAAAAATAG
Upstream 100 bases:
>100_bases AATTTACCATAACTAATATCAATGTATTAAGCAGTATTTTGGCAAAATTAAAGCGCAATAAAGAATTAAAAAGAAAGTTT AAACAGGGGGGACTGTCCTG
Downstream 100 bases:
>100_bases GTGGTGGGGAATTTGAAAAAAATAGCAATTTATCTATATATGTTTGCGGTGAAAATAACTGGCTCCTTAGCAAGGATTTT TCCTGTTCAGCAGAAAGTTG
Product: teichoic acid biosynthesis domain-containing protein
Products: NA
Alternate protein names: CGPTase; Major teichoic acid biosynthesis protein F; Polyglycerol phosphate polymerase [H]
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MKFVQKIYYLLFRLVGFLPRKKELVMFESFSGKQYSCNPRAIFEYMEEHNPEYELLWSVNPKYVGLFEEHGVPYVKRFSV SWLFKMGLAKYWISNSRLPLELPKPKKTIYVQTWHGTPLKKLGVDIDEVHMPGQTTEQYKTDFVKEAKKWDYLISPNAYS SVIFRRAFGFTGEMIESGYPRNDILFSSKKEEKIAAIKNELNIPADKKVILYAPTWRDNDFYEVGKYKFDLKIDIAKMRE KFGDEIILLVRMHYLVAEHFDFGQYGDFIRDTSNHEDIRDLYLVSDLLITDYSSVFFDYANLKRPMLFYTYDLAEYRDTL RGFYFDFEKNAPGPLVETNEALMDELGKMLENPPQIKESFLEQFCTWEDGHAAEKTVKTVFAKK
Sequences:
>Translated_384_residues MKFVQKIYYLLFRLVGFLPRKKELVMFESFSGKQYSCNPRAIFEYMEEHNPEYELLWSVNPKYVGLFEEHGVPYVKRFSV SWLFKMGLAKYWISNSRLPLELPKPKKTIYVQTWHGTPLKKLGVDIDEVHMPGQTTEQYKTDFVKEAKKWDYLISPNAYS SVIFRRAFGFTGEMIESGYPRNDILFSSKKEEKIAAIKNELNIPADKKVILYAPTWRDNDFYEVGKYKFDLKIDIAKMRE KFGDEIILLVRMHYLVAEHFDFGQYGDFIRDTSNHEDIRDLYLVSDLLITDYSSVFFDYANLKRPMLFYTYDLAEYRDTL RGFYFDFEKNAPGPLVETNEALMDELGKMLENPPQIKESFLEQFCTWEDGHAAEKTVKTVFAKK >Mature_384_residues MKFVQKIYYLLFRLVGFLPRKKELVMFESFSGKQYSCNPRAIFEYMEEHNPEYELLWSVNPKYVGLFEEHGVPYVKRFSV SWLFKMGLAKYWISNSRLPLELPKPKKTIYVQTWHGTPLKKLGVDIDEVHMPGQTTEQYKTDFVKEAKKWDYLISPNAYS SVIFRRAFGFTGEMIESGYPRNDILFSSKKEEKIAAIKNELNIPADKKVILYAPTWRDNDFYEVGKYKFDLKIDIAKMRE KFGDEIILLVRMHYLVAEHFDFGQYGDFIRDTSNHEDIRDLYLVSDLLITDYSSVFFDYANLKRPMLFYTYDLAEYRDTL RGFYFDFEKNAPGPLVETNEALMDELGKMLENPPQIKESFLEQFCTWEDGHAAEKTVKTVFAKK
Specific function: Is responsible for the polymerization of the main chain of the major teichoic acid by sequential transfer of glycerol phosphate units from CDP-glycerol to the dissacharide linkage unit. Synthesizes polymers of approximately 35 glycerol phosphate units in
COG id: COG1887
COG function: function code M; Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-glycerol glycerophosphotransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007554 [H]
Pfam domain/function: PF04464 Glyphos_transf [H]
EC number: =2.7.8.12 [H]
Molecular weight: Translated: 45415; Mature: 45415
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFVQKIYYLLFRLVGFLPRKKELVMFESFSGKQYSCNPRAIFEYMEEHNPEYELLWSVN CHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEECC PKYVGLFEEHGVPYVKRFSVSWLFKMGLAKYWISNSRLPLELPKPKKTIYVQTWHGTPLK CCEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCEEEEEEECCCCHH KLGVDIDEVHMPGQTTEQYKTDFVKEAKKWDYLISPNAYSSVIFRRAFGFTGEMIESGYP HHCCCHHHEECCCCCHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHCCCHHHHHCCCC RNDILFSSKKEEKIAAIKNELNIPADKKVILYAPTWRDNDFYEVGKYKFDLKIDIAKMRE CCCCEECCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEECCEEEEEEEEHHHHHH KFGDEIILLVRMHYLVAEHFDFGQYGDFIRDTSNHEDIRDLYLVSDLLITDYSSVFFDYA HHCCCEEHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH NLKRPMLFYTYDLAEYRDTLRGFYFDFEKNAPGPLVETNEALMDELGKMLENPPQIKESF HCCCCEEEEEECHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHH LEQFCTWEDGHAAEKTVKTVFAKK HHHHCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MKFVQKIYYLLFRLVGFLPRKKELVMFESFSGKQYSCNPRAIFEYMEEHNPEYELLWSVN CHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEECC PKYVGLFEEHGVPYVKRFSVSWLFKMGLAKYWISNSRLPLELPKPKKTIYVQTWHGTPLK CCEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCEEEEEEECCCCHH KLGVDIDEVHMPGQTTEQYKTDFVKEAKKWDYLISPNAYSSVIFRRAFGFTGEMIESGYP HHCCCHHHEECCCCCHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHCCCHHHHHCCCC RNDILFSSKKEEKIAAIKNELNIPADKKVILYAPTWRDNDFYEVGKYKFDLKIDIAKMRE CCCCEECCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEECCEEEEEEEEHHHHHH KFGDEIILLVRMHYLVAEHFDFGQYGDFIRDTSNHEDIRDLYLVSDLLITDYSSVFFDYA HHCCCEEHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH NLKRPMLFYTYDLAEYRDTLRGFYFDFEKNAPGPLVETNEALMDELGKMLENPPQIKESF HCCCCEEEEEECHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHH LEQFCTWEDGHAAEKTVKTVFAKK HHHHCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2507871; 9384377; 1309530; 12637499 [H]