| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is tagB [H]
Identifier: 116872481
GI number: 116872481
Start: 1087003
End: 1088163
Strand: Direct
Name: tagB [H]
Synonym: lwe1065
Alternate gene names: 116872481
Gene position: 1087003-1088163 (Clockwise)
Preceding gene: 116872480
Following gene: 116872482
Centisome position: 38.63
GC content: 31.61
Gene sequence:
>1161_bases TTGAAAAAAATAGCAATTTATCTATATATGTTTGCGGTGAAAATAACTGGCTCCTTAGCAAGGATTTTTCCTGTTCAGCA GAAAGTTGTTTTTCTAGTAAGTTTTGAAGAAAACCCCACAGCTATTATTAGGCAAATGGAACTTGCGAAAGTAAAGCCCA AAACGGTTGTTTTCTATGATCCGCGTGTCAATGTAACGAATATGTCTTTAGATTTCATACAATTAAAACCTAAAAATTTA GCGCAATTTATTCCACTCATGTTTCATATTAATACAGCAAAAGTTATTGTTACAGATAATTATTTTGTAGAGCTAGCTGG CTTAAAAGTGAGAAGTGGTGTATCTTGTATTCAAATTTGGCATGCTAATGGGGCGTTGAAAAAGTTTGGTTGGGAAGATA AAGCTGCCCAAAAACGAACGGATACCGACAAAAAAAGATTTTTAGAAGTATATAAACGTTTTACGAACGTGCTTGTAGGA TCGGATGCAATGGCAGCTATTTTCAAAAAATCGTTTTTAATGAGTGAATCGCAAATTTTAAAACTTGGTATTCCACGTAC AGATTATTTTTTCAATGAACAAAAGTTAAAAGAAAATTATGAGTGGACTTATTCAAAATTAAATCTTATGGATAAAAAGA TAATTTTATATGCGCCTACTTTTCGTGATAATGAACTTCAAAGTACTAAATTGCATTTAAATATTACTGAATTGAAAGCA GCATTAAGTAATGATTATCAGCTGATCTTAAAACTTCATCCATCCATTAGTCAGGATTTGGAAAAAATAGAAGATGATTT TGTTGTATATGCGGATAAGGAAATGCCGATAGAAACGATATTACCTACAGTAGATATTTTAATTACTGACTATTCTTCTA TCCCTTTTGAATTTGCATTACTTCATAAACCAATTATATTTTTCACCTATGATTTAAACGAATATGATAAAGCAAGAGGG CTTTCTGATGGGTTTTTAGAAACAATTCCAGGGCCGCATGCTTTTACAACAACGGGACTTATTGAATTAATTAAACAAGA AACATTCGATATAGAAAGAATCCGTTCTTTTGCAGCAGAATGGAATAAATATTCAGACGGTTTTTCCAGTGAACGCTTTG TTTTATTTTTAAAAGAACAGCTGGAAAAACAAGACAGCTAA
Upstream 100 bases:
>100_bases AAAAGAAAGTTTTTTAGAACAGTTTTGTACTTGGGAAGATGGTCATGCGGCAGAAAAAACCGTAAAAACAGTTTTTGCTA AAAAATAGGTGGTGGGGAAT
Downstream 100 bases:
>100_bases CAAGTAGAGAAATTTTTGTTTTCTTGATATACTACTAAAGAAAGTAGGTGGGCTGATGAAAAAAGTAATTACATATGGTA CATTTGATTTAATTCACTGG
Product: teichoic acid biosynthesis protein B
Products: NA
Alternate protein names: Major teichoic acid biosynthesis protein B [H]
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MKKIAIYLYMFAVKITGSLARIFPVQQKVVFLVSFEENPTAIIRQMELAKVKPKTVVFYDPRVNVTNMSLDFIQLKPKNL AQFIPLMFHINTAKVIVTDNYFVELAGLKVRSGVSCIQIWHANGALKKFGWEDKAAQKRTDTDKKRFLEVYKRFTNVLVG SDAMAAIFKKSFLMSESQILKLGIPRTDYFFNEQKLKENYEWTYSKLNLMDKKIILYAPTFRDNELQSTKLHLNITELKA ALSNDYQLILKLHPSISQDLEKIEDDFVVYADKEMPIETILPTVDILITDYSSIPFEFALLHKPIIFFTYDLNEYDKARG LSDGFLETIPGPHAFTTTGLIELIKQETFDIERIRSFAAEWNKYSDGFSSERFVLFLKEQLEKQDS
Sequences:
>Translated_386_residues MKKIAIYLYMFAVKITGSLARIFPVQQKVVFLVSFEENPTAIIRQMELAKVKPKTVVFYDPRVNVTNMSLDFIQLKPKNL AQFIPLMFHINTAKVIVTDNYFVELAGLKVRSGVSCIQIWHANGALKKFGWEDKAAQKRTDTDKKRFLEVYKRFTNVLVG SDAMAAIFKKSFLMSESQILKLGIPRTDYFFNEQKLKENYEWTYSKLNLMDKKIILYAPTFRDNELQSTKLHLNITELKA ALSNDYQLILKLHPSISQDLEKIEDDFVVYADKEMPIETILPTVDILITDYSSIPFEFALLHKPIIFFTYDLNEYDKARG LSDGFLETIPGPHAFTTTGLIELIKQETFDIERIRSFAAEWNKYSDGFSSERFVLFLKEQLEKQDS >Mature_386_residues MKKIAIYLYMFAVKITGSLARIFPVQQKVVFLVSFEENPTAIIRQMELAKVKPKTVVFYDPRVNVTNMSLDFIQLKPKNL AQFIPLMFHINTAKVIVTDNYFVELAGLKVRSGVSCIQIWHANGALKKFGWEDKAAQKRTDTDKKRFLEVYKRFTNVLVG SDAMAAIFKKSFLMSESQILKLGIPRTDYFFNEQKLKENYEWTYSKLNLMDKKIILYAPTFRDNELQSTKLHLNITELKA ALSNDYQLILKLHPSISQDLEKIEDDFVVYADKEMPIETILPTVDILITDYSSIPFEFALLHKPIIFFTYDLNEYDKARG LSDGFLETIPGPHAFTTTGLIELIKQETFDIERIRSFAAEWNKYSDGFSSERFVLFLKEQLEKQDS
Specific function: Catalyzes the addition of a single glycerol-P residue to the prenolpyrophosphate-linked dissacharide, as a primer for polymerisation by tagF (Potential) [H]
COG id: COG1887
COG function: function code M; Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-glycerol glycerophosphotransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007554 [H]
Pfam domain/function: PF04464 Glyphos_transf [H]
EC number: NA
Molecular weight: Translated: 44753; Mature: 44753
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIAIYLYMFAVKITGSLARIFPVQQKVVFLVSFEENPTAIIRQMELAKVKPKTVVFYD CCEEEEEEEEEHHHHHCCHHHHEECCEEEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEC PRVNVTNMSLDFIQLKPKNLAQFIPLMFHINTAKVIVTDNYFVELAGLKVRSGVSCIQIW CCCEEEEEEEEEEEECCHHHHHHHHHHEEECCEEEEEECCEEEEEECEEECCCCEEEEEE HANGALKKFGWEDKAAQKRTDTDKKRFLEVYKRFTNVLVGSDAMAAIFKKSFLMSESQIL ECCCCHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHCCCCCEE KLGIPRTDYFFNEQKLKENYEWTYSKLNLMDKKIILYAPTFRDNELQSTKLHLNITELKA EECCCCCCCCCCHHHHHCCCCEEHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEHHHHHH ALSNDYQLILKLHPSISQDLEKIEDDFVVYADKEMPIETILPTVDILITDYSSIPFEFAL HHCCCEEEEEEECCCHHHHHHHHCCCEEEEECCCCCHHHHHCCEEEEEECCCCCCEEEEE LHKPIIFFTYDLNEYDKARGLSDGFLETIPGPHAFTTTGLIELIKQETFDIERIRSFAAE ECCCEEEEEECCCHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH WNKYSDGFSSERFVLFLKEQLEKQDS HHHCCCCCCCCCEEEEEHHHHHCCCC >Mature Secondary Structure MKKIAIYLYMFAVKITGSLARIFPVQQKVVFLVSFEENPTAIIRQMELAKVKPKTVVFYD CCEEEEEEEEEHHHHHCCHHHHEECCEEEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEC PRVNVTNMSLDFIQLKPKNLAQFIPLMFHINTAKVIVTDNYFVELAGLKVRSGVSCIQIW CCCEEEEEEEEEEEECCHHHHHHHHHHEEECCEEEEEECCEEEEEECEEECCCCEEEEEE HANGALKKFGWEDKAAQKRTDTDKKRFLEVYKRFTNVLVGSDAMAAIFKKSFLMSESQIL ECCCCHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHCCCCCEE KLGIPRTDYFFNEQKLKENYEWTYSKLNLMDKKIILYAPTFRDNELQSTKLHLNITELKA EECCCCCCCCCCHHHHHCCCCEEHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEHHHHHH ALSNDYQLILKLHPSISQDLEKIEDDFVVYADKEMPIETILPTVDILITDYSSIPFEFAL HHCCCEEEEEEECCCHHHHHHHHCCCEEEEECCCCCHHHHHCCEEEEEECCCCCCEEEEE LHKPIIFFTYDLNEYDKARGLSDGFLETIPGPHAFTTTGLIELIKQETFDIERIRSFAAE ECCCEEEEEECCCHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH WNKYSDGFSSERFVLFLKEQLEKQDS HHHCCCCCCCCCEEEEEHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1906926; 9384377; 11882717 [H]