Definition Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession NC_008555
Length 2,814,130

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The map label for this gene is ggaA [H]

Identifier: 116872479

GI number: 116872479

Start: 1084448

End: 1085836

Strand: Direct

Name: ggaA [H]

Synonym: lwe1063

Alternate gene names: 116872479

Gene position: 1084448-1085836 (Clockwise)

Preceding gene: 116872478

Following gene: 116872480

Centisome position: 38.54

GC content: 31.1

Gene sequence:

>1389_bases
ATGAAATTTGCAATTATAATTCCTTTTTACAATGCTGAAAAAAGACTTAGTTTGTCTATAGATAGTATAATTAAGCAGTC
TTACGGCTTTTTGGAGCATGTAGAGTTACTGCTTATTAATGATGGAAGTACCGACGATAGTGGAATAATTGCAGCAAAAT
ATGCTGATAAATATCCGAGCAATATTAGATATATTGAAGTCCCAAATGGCGGTCCATCGAAAGCACGAAATATTGGTATA
CATAATGTAAGAAAAGACACAGATTTTATCGGATTTTTAGATGCAGATGATCTTTTAACTAACAACACGTTAGCAAGTAT
GGCTGCTTTTTTAGATGAAAATCAAGTTAATATGCTAGTTCCTGCATTTTATTATTTGGATGATTTTGGAAAAAAAGAAA
AAATTTCTGCGCACAAATTAAACAATCGATTTGATCAAGGAAATAGAGTAATCCATATTGAAAAAGAACCTCAAGCAATT
CATTTTTATATTGGGGGGACTTTTCTGCGTTATGAGCATTTAAAAAATTTTTCATTTGATGAATCGCTTCGCTTTGCAGA
AGATCAATTGTTAATTACGCAGTTTTTACTTGAAAGTAAATCTTATGGCGTTATTGCTGATGCTGGTTATTATTATTACC
GTGATTTAAAACAAAAAGGTTCTTTAGTGAGTTCAGCTTGGAAGCAACCAGATAGATACATCCCATTTCTCCAAAATGTG
TATCAAGTTTATTTAACACGTTCTAAAGAGCTTTTTGGTGAGGTCATTCCATATGTTCAATATTTAATTGCTTATCATGC
AAAATTATTTTTTTATAAAGAAAATAGCTATTTTAAAGAAGTATTAAACGAAGAAGAACAAGAAATCTTTGTACGAGAAT
TGCAAAAAATACTACAAGAAGTAGAAAAAGAAACTATTCTAAAACTCGATACACCACTTGTTGTAAAAGAAATGATACTT
TCTATTTTAAGATATGGCTGGCCTATTCAATTTGAAGCGGCAAACATCCAGGAAGTTCCAGTTACTACAGTGAAAGAAAA
TTATCGGATAGGGAAAGCTGTTTTCATTGAATTGTATTTAGAAGAAGCAAGACTCAATTTACCGGATGAGGGTCGTTTTA
TCGCTCACACTAGATTTCGTGGGCTACCTACTAAAATAATAAAAAGACAAGTAGACCAAAAAATGTGGGATGTAATTGTT
AGAAAACAAGGCACAATCGAAAAAGCAATCTTTAAGCTAAAACCTTATCAAAATAAAGTAAGCATTTATTATCAAGATAA
TATGACGAAATTTACCATAACTAATATCAATGTATTAAGCAGTATTTTGGCAAAATTAAAGCGCAATAAAGAATTAAAAA
GAAAGTTTAAACAGGGGGGACTGTCCTGA

Upstream 100 bases:

>100_bases
TGTTTGCTAAAGTTTGTTTAGGAAGCAAGTCGAATTAAAATGTTCGATAATCATTTGTTTTTATCTAAACTTCCCAGCTT
TTATATGGAGAGGAAAAAGA

Downstream 100 bases:

>100_bases
TGAAATTCGTACAAAAAATATATTATTTACTCTTTAGATTAGTAGGATTTTTACCTCGAAAAAAAGAGTTAGTTATGTTT
GAAAGTTTTTCAGGCAAACA

Product: glycosyl transferase, group 2 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MKFAIIIPFYNAEKRLSLSIDSIIKQSYGFLEHVELLLINDGSTDDSGIIAAKYADKYPSNIRYIEVPNGGPSKARNIGI
HNVRKDTDFIGFLDADDLLTNNTLASMAAFLDENQVNMLVPAFYYLDDFGKKEKISAHKLNNRFDQGNRVIHIEKEPQAI
HFYIGGTFLRYEHLKNFSFDESLRFAEDQLLITQFLLESKSYGVIADAGYYYYRDLKQKGSLVSSAWKQPDRYIPFLQNV
YQVYLTRSKELFGEVIPYVQYLIAYHAKLFFYKENSYFKEVLNEEEQEIFVRELQKILQEVEKETILKLDTPLVVKEMIL
SILRYGWPIQFEAANIQEVPVTTVKENYRIGKAVFIELYLEEARLNLPDEGRFIAHTRFRGLPTKIIKRQVDQKMWDVIV
RKQGTIEKAIFKLKPYQNKVSIYYQDNMTKFTITNINVLSSILAKLKRNKELKRKFKQGGLS

Sequences:

>Translated_462_residues
MKFAIIIPFYNAEKRLSLSIDSIIKQSYGFLEHVELLLINDGSTDDSGIIAAKYADKYPSNIRYIEVPNGGPSKARNIGI
HNVRKDTDFIGFLDADDLLTNNTLASMAAFLDENQVNMLVPAFYYLDDFGKKEKISAHKLNNRFDQGNRVIHIEKEPQAI
HFYIGGTFLRYEHLKNFSFDESLRFAEDQLLITQFLLESKSYGVIADAGYYYYRDLKQKGSLVSSAWKQPDRYIPFLQNV
YQVYLTRSKELFGEVIPYVQYLIAYHAKLFFYKENSYFKEVLNEEEQEIFVRELQKILQEVEKETILKLDTPLVVKEMIL
SILRYGWPIQFEAANIQEVPVTTVKENYRIGKAVFIELYLEEARLNLPDEGRFIAHTRFRGLPTKIIKRQVDQKMWDVIV
RKQGTIEKAIFKLKPYQNKVSIYYQDNMTKFTITNINVLSSILAKLKRNKELKRKFKQGGLS
>Mature_462_residues
MKFAIIIPFYNAEKRLSLSIDSIIKQSYGFLEHVELLLINDGSTDDSGIIAAKYADKYPSNIRYIEVPNGGPSKARNIGI
HNVRKDTDFIGFLDADDLLTNNTLASMAAFLDENQVNMLVPAFYYLDDFGKKEKISAHKLNNRFDQGNRVIHIEKEPQAI
HFYIGGTFLRYEHLKNFSFDESLRFAEDQLLITQFLLESKSYGVIADAGYYYYRDLKQKGSLVSSAWKQPDRYIPFLQNV
YQVYLTRSKELFGEVIPYVQYLIAYHAKLFFYKENSYFKEVLNEEEQEIFVRELQKILQEVEKETILKLDTPLVVKEMIL
SILRYGWPIQFEAANIQEVPVTTVKENYRIGKAVFIELYLEEARLNLPDEGRFIAHTRFRGLPTKIIKRQVDQKMWDVIV
RKQGTIEKAIFKLKPYQNKVSIYYQDNMTKFTITNINVLSSILAKLKRNKELKRKFKQGGLS

Specific function: Involved in the biosynthesis of galactosamine-containing minor teichoic acid, a non-essential cell wall polymer in B.subtilis 168 [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=96, Percent_Identity=41.6666666666667, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 53925; Mature: 53925

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFAIIIPFYNAEKRLSLSIDSIIKQSYGFLEHVELLLINDGSTDDSGIIAAKYADKYPS
CEEEEEEEEECCCCEEEEEHHHHHHHHCCHHHEEEEEEEECCCCCCCCEEEEEECCCCCC
NIRYIEVPNGGPSKARNIGIHNVRKDTDFIGFLDADDLLTNNTLASMAAFLDENQVNMLV
CEEEEECCCCCCCHHHCCCCCCCCCCCCEEEEECHHHHHCCCHHHHHHHHHCCCCCCEEH
PAFYYLDDFGKKEKISAHKLNNRFDQGNRVIHIEKEPQAIHFYIGGTFLRYEHLKNFSFD
HHHHHHHHCCCCCCCHHHHHCCCCCCCCEEEEEECCCCEEEEEECCEEEEHHHHCCCCCC
ESLRFAEDQLLITQFLLESKSYGVIADAGYYYYRDLKQKGSLVSSAWKQPDRYIPFLQNV
HHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHCHHHHHHHCCCCCCCHHHHHH
YQVYLTRSKELFGEVIPYVQYLIAYHAKLFFYKENSYFKEVLNEEEQEIFVRELQKILQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHCCHHHHHHHHHHHHHHHH
VEKETILKLDTPLVVKEMILSILRYGWPIQFEAANIQEVPVTTVKENYRIGKAVFIELYL
HHHHHHEECCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEHHCCCCCCCEEEEEEEE
EEARLNLPDEGRFIAHTRFRGLPTKIIKRQVDQKMWDVIVRKQGTIEKAIFKLKPYQNKV
HHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEE
SIYYQDNMTKFTITNINVLSSILAKLKRNKELKRKFKQGGLS
EEEEECCCEEEEEECHHHHHHHHHHHHCCHHHHHHHHHCCCC
>Mature Secondary Structure
MKFAIIIPFYNAEKRLSLSIDSIIKQSYGFLEHVELLLINDGSTDDSGIIAAKYADKYPS
CEEEEEEEEECCCCEEEEEHHHHHHHHCCHHHEEEEEEEECCCCCCCCEEEEEECCCCCC
NIRYIEVPNGGPSKARNIGIHNVRKDTDFIGFLDADDLLTNNTLASMAAFLDENQVNMLV
CEEEEECCCCCCCHHHCCCCCCCCCCCCEEEEECHHHHHCCCHHHHHHHHHCCCCCCEEH
PAFYYLDDFGKKEKISAHKLNNRFDQGNRVIHIEKEPQAIHFYIGGTFLRYEHLKNFSFD
HHHHHHHHCCCCCCCHHHHHCCCCCCCCEEEEEECCCCEEEEEECCEEEEHHHHCCCCCC
ESLRFAEDQLLITQFLLESKSYGVIADAGYYYYRDLKQKGSLVSSAWKQPDRYIPFLQNV
HHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHCHHHHHHHCCCCCCCHHHHHH
YQVYLTRSKELFGEVIPYVQYLIAYHAKLFFYKENSYFKEVLNEEEQEIFVRELQKILQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHCCHHHHHHHHHHHHHHHH
VEKETILKLDTPLVVKEMILSILRYGWPIQFEAANIQEVPVTTVKENYRIGKAVFIELYL
HHHHHHEECCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEHHCCCCCCCEEEEEEEE
EEARLNLPDEGRFIAHTRFRGLPTKIIKRQVDQKMWDVIVRKQGTIEKAIFKLKPYQNKV
HHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEE
SIYYQDNMTKFTITNINVLSSILAKLKRNKELKRKFKQGGLS
EEEEECCCEEEEEECHHHHHHHHHHHHCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]