| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is ggaA [H]
Identifier: 116872479
GI number: 116872479
Start: 1084448
End: 1085836
Strand: Direct
Name: ggaA [H]
Synonym: lwe1063
Alternate gene names: 116872479
Gene position: 1084448-1085836 (Clockwise)
Preceding gene: 116872478
Following gene: 116872480
Centisome position: 38.54
GC content: 31.1
Gene sequence:
>1389_bases ATGAAATTTGCAATTATAATTCCTTTTTACAATGCTGAAAAAAGACTTAGTTTGTCTATAGATAGTATAATTAAGCAGTC TTACGGCTTTTTGGAGCATGTAGAGTTACTGCTTATTAATGATGGAAGTACCGACGATAGTGGAATAATTGCAGCAAAAT ATGCTGATAAATATCCGAGCAATATTAGATATATTGAAGTCCCAAATGGCGGTCCATCGAAAGCACGAAATATTGGTATA CATAATGTAAGAAAAGACACAGATTTTATCGGATTTTTAGATGCAGATGATCTTTTAACTAACAACACGTTAGCAAGTAT GGCTGCTTTTTTAGATGAAAATCAAGTTAATATGCTAGTTCCTGCATTTTATTATTTGGATGATTTTGGAAAAAAAGAAA AAATTTCTGCGCACAAATTAAACAATCGATTTGATCAAGGAAATAGAGTAATCCATATTGAAAAAGAACCTCAAGCAATT CATTTTTATATTGGGGGGACTTTTCTGCGTTATGAGCATTTAAAAAATTTTTCATTTGATGAATCGCTTCGCTTTGCAGA AGATCAATTGTTAATTACGCAGTTTTTACTTGAAAGTAAATCTTATGGCGTTATTGCTGATGCTGGTTATTATTATTACC GTGATTTAAAACAAAAAGGTTCTTTAGTGAGTTCAGCTTGGAAGCAACCAGATAGATACATCCCATTTCTCCAAAATGTG TATCAAGTTTATTTAACACGTTCTAAAGAGCTTTTTGGTGAGGTCATTCCATATGTTCAATATTTAATTGCTTATCATGC AAAATTATTTTTTTATAAAGAAAATAGCTATTTTAAAGAAGTATTAAACGAAGAAGAACAAGAAATCTTTGTACGAGAAT TGCAAAAAATACTACAAGAAGTAGAAAAAGAAACTATTCTAAAACTCGATACACCACTTGTTGTAAAAGAAATGATACTT TCTATTTTAAGATATGGCTGGCCTATTCAATTTGAAGCGGCAAACATCCAGGAAGTTCCAGTTACTACAGTGAAAGAAAA TTATCGGATAGGGAAAGCTGTTTTCATTGAATTGTATTTAGAAGAAGCAAGACTCAATTTACCGGATGAGGGTCGTTTTA TCGCTCACACTAGATTTCGTGGGCTACCTACTAAAATAATAAAAAGACAAGTAGACCAAAAAATGTGGGATGTAATTGTT AGAAAACAAGGCACAATCGAAAAAGCAATCTTTAAGCTAAAACCTTATCAAAATAAAGTAAGCATTTATTATCAAGATAA TATGACGAAATTTACCATAACTAATATCAATGTATTAAGCAGTATTTTGGCAAAATTAAAGCGCAATAAAGAATTAAAAA GAAAGTTTAAACAGGGGGGACTGTCCTGA
Upstream 100 bases:
>100_bases TGTTTGCTAAAGTTTGTTTAGGAAGCAAGTCGAATTAAAATGTTCGATAATCATTTGTTTTTATCTAAACTTCCCAGCTT TTATATGGAGAGGAAAAAGA
Downstream 100 bases:
>100_bases TGAAATTCGTACAAAAAATATATTATTTACTCTTTAGATTAGTAGGATTTTTACCTCGAAAAAAAGAGTTAGTTATGTTT GAAAGTTTTTCAGGCAAACA
Product: glycosyl transferase, group 2 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 462; Mature: 462
Protein sequence:
>462_residues MKFAIIIPFYNAEKRLSLSIDSIIKQSYGFLEHVELLLINDGSTDDSGIIAAKYADKYPSNIRYIEVPNGGPSKARNIGI HNVRKDTDFIGFLDADDLLTNNTLASMAAFLDENQVNMLVPAFYYLDDFGKKEKISAHKLNNRFDQGNRVIHIEKEPQAI HFYIGGTFLRYEHLKNFSFDESLRFAEDQLLITQFLLESKSYGVIADAGYYYYRDLKQKGSLVSSAWKQPDRYIPFLQNV YQVYLTRSKELFGEVIPYVQYLIAYHAKLFFYKENSYFKEVLNEEEQEIFVRELQKILQEVEKETILKLDTPLVVKEMIL SILRYGWPIQFEAANIQEVPVTTVKENYRIGKAVFIELYLEEARLNLPDEGRFIAHTRFRGLPTKIIKRQVDQKMWDVIV RKQGTIEKAIFKLKPYQNKVSIYYQDNMTKFTITNINVLSSILAKLKRNKELKRKFKQGGLS
Sequences:
>Translated_462_residues MKFAIIIPFYNAEKRLSLSIDSIIKQSYGFLEHVELLLINDGSTDDSGIIAAKYADKYPSNIRYIEVPNGGPSKARNIGI HNVRKDTDFIGFLDADDLLTNNTLASMAAFLDENQVNMLVPAFYYLDDFGKKEKISAHKLNNRFDQGNRVIHIEKEPQAI HFYIGGTFLRYEHLKNFSFDESLRFAEDQLLITQFLLESKSYGVIADAGYYYYRDLKQKGSLVSSAWKQPDRYIPFLQNV YQVYLTRSKELFGEVIPYVQYLIAYHAKLFFYKENSYFKEVLNEEEQEIFVRELQKILQEVEKETILKLDTPLVVKEMIL SILRYGWPIQFEAANIQEVPVTTVKENYRIGKAVFIELYLEEARLNLPDEGRFIAHTRFRGLPTKIIKRQVDQKMWDVIV RKQGTIEKAIFKLKPYQNKVSIYYQDNMTKFTITNINVLSSILAKLKRNKELKRKFKQGGLS >Mature_462_residues MKFAIIIPFYNAEKRLSLSIDSIIKQSYGFLEHVELLLINDGSTDDSGIIAAKYADKYPSNIRYIEVPNGGPSKARNIGI HNVRKDTDFIGFLDADDLLTNNTLASMAAFLDENQVNMLVPAFYYLDDFGKKEKISAHKLNNRFDQGNRVIHIEKEPQAI HFYIGGTFLRYEHLKNFSFDESLRFAEDQLLITQFLLESKSYGVIADAGYYYYRDLKQKGSLVSSAWKQPDRYIPFLQNV YQVYLTRSKELFGEVIPYVQYLIAYHAKLFFYKENSYFKEVLNEEEQEIFVRELQKILQEVEKETILKLDTPLVVKEMIL SILRYGWPIQFEAANIQEVPVTTVKENYRIGKAVFIELYLEEARLNLPDEGRFIAHTRFRGLPTKIIKRQVDQKMWDVIV RKQGTIEKAIFKLKPYQNKVSIYYQDNMTKFTITNINVLSSILAKLKRNKELKRKFKQGGLS
Specific function: Involved in the biosynthesis of galactosamine-containing minor teichoic acid, a non-essential cell wall polymer in B.subtilis 168 [H]
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1790044, Length=96, Percent_Identity=41.6666666666667, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 53925; Mature: 53925
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFAIIIPFYNAEKRLSLSIDSIIKQSYGFLEHVELLLINDGSTDDSGIIAAKYADKYPS CEEEEEEEEECCCCEEEEEHHHHHHHHCCHHHEEEEEEEECCCCCCCCEEEEEECCCCCC NIRYIEVPNGGPSKARNIGIHNVRKDTDFIGFLDADDLLTNNTLASMAAFLDENQVNMLV CEEEEECCCCCCCHHHCCCCCCCCCCCCEEEEECHHHHHCCCHHHHHHHHHCCCCCCEEH PAFYYLDDFGKKEKISAHKLNNRFDQGNRVIHIEKEPQAIHFYIGGTFLRYEHLKNFSFD HHHHHHHHCCCCCCCHHHHHCCCCCCCCEEEEEECCCCEEEEEECCEEEEHHHHCCCCCC ESLRFAEDQLLITQFLLESKSYGVIADAGYYYYRDLKQKGSLVSSAWKQPDRYIPFLQNV HHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHCHHHHHHHCCCCCCCHHHHHH YQVYLTRSKELFGEVIPYVQYLIAYHAKLFFYKENSYFKEVLNEEEQEIFVRELQKILQE HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHCCHHHHHHHHHHHHHHHH VEKETILKLDTPLVVKEMILSILRYGWPIQFEAANIQEVPVTTVKENYRIGKAVFIELYL HHHHHHEECCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEHHCCCCCCCEEEEEEEE EEARLNLPDEGRFIAHTRFRGLPTKIIKRQVDQKMWDVIVRKQGTIEKAIFKLKPYQNKV HHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEE SIYYQDNMTKFTITNINVLSSILAKLKRNKELKRKFKQGGLS EEEEECCCEEEEEECHHHHHHHHHHHHCCHHHHHHHHHCCCC >Mature Secondary Structure MKFAIIIPFYNAEKRLSLSIDSIIKQSYGFLEHVELLLINDGSTDDSGIIAAKYADKYPS CEEEEEEEEECCCCEEEEEHHHHHHHHCCHHHEEEEEEEECCCCCCCCEEEEEECCCCCC NIRYIEVPNGGPSKARNIGIHNVRKDTDFIGFLDADDLLTNNTLASMAAFLDENQVNMLV CEEEEECCCCCCCHHHCCCCCCCCCCCCEEEEECHHHHHCCCHHHHHHHHHCCCCCCEEH PAFYYLDDFGKKEKISAHKLNNRFDQGNRVIHIEKEPQAIHFYIGGTFLRYEHLKNFSFD HHHHHHHHCCCCCCCHHHHHCCCCCCCCEEEEEECCCCEEEEEECCEEEEHHHHCCCCCC ESLRFAEDQLLITQFLLESKSYGVIADAGYYYYRDLKQKGSLVSSAWKQPDRYIPFLQNV HHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHCHHHHHHHCCCCCCCHHHHHH YQVYLTRSKELFGEVIPYVQYLIAYHAKLFFYKENSYFKEVLNEEEQEIFVRELQKILQE HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHCCHHHHHHHHHHHHHHHH VEKETILKLDTPLVVKEMILSILRYGWPIQFEAANIQEVPVTTVKENYRIGKAVFIELYL HHHHHHEECCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEHHCCCCCCCEEEEEEEE EEARLNLPDEGRFIAHTRFRGLPTKIIKRQVDQKMWDVIVRKQGTIEKAIFKLKPYQNKV HHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEE SIYYQDNMTKFTITNINVLSSILAKLKRNKELKRKFKQGGLS EEEEECCCEEEEEECHHHHHHHHHHHHCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]