| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is tarL [H]
Identifier: 116872476
GI number: 116872476
Start: 1080161
End: 1082512
Strand: Direct
Name: tarL [H]
Synonym: lwe1060
Alternate gene names: 116872476
Gene position: 1080161-1082512 (Clockwise)
Preceding gene: 116872474
Following gene: 116872477
Centisome position: 38.38
GC content: 33.5
Gene sequence:
>2352_bases ATGCTCTATGAGATTATAAAAGAATCAAAAATAGCAGAACCAAAAATTTCTGTTATAGTTCCAGTTTATAATGTAATTAG TTATATTGATGAAACGATTAATTCCTTACTAAGCCAAACCTTAAAAGAAATTGAAATAATTTTAGTTGATGACGGTTCTT CTGATGGAAGTTTTGAAAGAATTATTGATTACGGGGAACGTCATGATAATATTTGTGTCGCAAAAGAACCTAACGCCGGA CCTGGTATGGCTCGTAATAACGGTTTAAGCATCGCTAAAGGTAAATACATTAGTTTTGTTGACTCTGATGACATTCTCCC TGAAAGAGCGCTAGAAATCATGTATGAAGCTGCTGAGAAAGAGCAAGTTGGTGTAGTTACTGGTATATCTGTCAGCTTTA ACAACAGTCGCTCATGGTTTATTGGCGGGCACTTTAAAAAAGGTGTTTTCAAAAAAGGTCGTAAATCACTTCTCCAAAAC CCCGAAATGCTATATACATTAGGACCGTGTAATAAACTTTATCGCCGAGATATGGTTCAAGATATTCGTTTCCCTAATTC AATTAAAGTTGCAGAAGATCACCCATTTGTTATTGAAGCTTATTTGAAATCTGAAAATATTTATACAGTAGATGAAATAA TATATAATTATAGGGCACGTGAAGATGAAGGGGATATCTCACTATCTCAAATCGTTACATCAGATCCTTATGTGAGTTTC AAAGATATCATTGCCAGCATCAAACTTTCAGATGCTCTTTTAAAACAATATGTGACGAATCCAATTGCACTTCAAAAAAT TAGAATAGATTATTATGACCGGATTATTTCAACAGATATTTGGCCTGCCTATAAAGGGATTTTGTTGAGCGGAAGCGCGG AAACGCAAATTAAAATGTTCGATGCTTTTCGTGAATTATTAGATTCGATGGATTTTCATTTGTATAATAACCTAGGCGTA TTTCAGCGTTTGCTTACATTTGAAACAATTAATCGCTACACATTTATTAAAGAAAAGGCGCGCTCAAGTTATTTGAGAGC TGTAAGATTAGCCTATGAAAAATTAGATCCAGGTTCTTTAAATAAATTGTTATCATCAGAGTTTCCTAAAGAAGTTCGTG CTGGCGAAAAAGCTGCTAAACGAAACTCAATCAAACCAATCTATAACCGTCTTGTTACTCGTAAAATTGGTTCGACAATT AAACTTGGATATGAAAAAGTTATCGCCGAAAATTGGAAAAAATTATCTGGAGTTGCGCGTAATTTTTATGCGCGTAGAAT TTCTTTTCCGTTTTATAAATTAGCTAAGAAAGAACGTAAAATAGTCTTTCTAACTAATAAGCATGATGTGCTTGCTGATT CTTTTAAAGCTGTATATGATGAAGTTATCTTGCAAAAACCAGATTATAAAGTGGTAGGGTATCTAAAACAACCAAAACGT TCTATTTTGGAATTGCTAAAAATGTACAAAGACATTGCAACCGCTGAATATATCTTTTTAGATGATTATTATCGTCAAAT ATATGGACTAACACTTCGCAAAGATACAGAAGTGATTCAACTTTGGCATGCCGCAGGAGCTTTTAAAAAGTTTGGTTTTA GTTCCATAGGTTATGCAGATAGTAATACAGAAAGTTTTGAACGTGATGCACATAAAAACTATTCAAAAGTAGTTGTATCT TCAAGTGAAATAGTGCCATTTTATGCAGAAGCATTTGGAGTAGACGAAAAGAATGTGTTACCACTAGGCGTTCCACGAAC AGATCGTTTCTTTAATGAAGAGTACAAAACTTACATTAAAACTGTTTTTGAAGGTAAATATCCAGCTTTGAAGAATAAAA AAATCATCACATATGCACCAACTTTCCGTGGCGGTCCAGGTGAACGTCAACAATTTATTATGAACTTGAACATTCGTCGT CTGGCTGAACAATTAGGTGATGAATATGCACTTATTTTAAAAATGCATCCATCTGTTGTTAGAGGAGTCGGAATCCCATT TGATTTACAAGAATTCGCATTTAATATGAGCGGGGAAGACATTAACGATGTTTTAATTAATACGGACATTTTAATTACCG ATTATTCATCCGTAGTCTTTGATTTCTCGATAATGGAAAAACCAATTCTTTTCTATGCTTATGATTTGGAAAATTATTTA GGAGAGCGTAATTTCTATTATAATTTTGAAGAATTTGTTCCGGGGCCAATTGTTCGGACAAATGAAGAAGTAATTAGCGC AATTAAATCAAATGATTTTGATCTTCATAAAGTTCGCACGTTTAAAGAGAGATTCTTTGATGATTTAGACGGCCATTCTG CAGAACGAATTGTGAAAGAACTTATTAAGTAA
Upstream 100 bases:
>100_bases TGAATACTAAAAGAGACAGTTTTACTATGTTATCTTGACATTTATGGGCAATTGTAATAGATTGAAGAAAGTAAATAAAA TGTATAAAGGGAGATTAAGC
Downstream 100 bases:
>100_bases GATTTAACACTGGAATTGTGGTATAATAAACACTGTTAAAAAAACAGTTAAAGGAGATTAGAGGATGATATACGCTCAAA TTTTAGCTGGAGGAAAAGGC
Product: glycosyl transferase, group 2 family protein
Products: NA
Alternate protein names: Polyribitol phosphate polymerase [H]
Number of amino acids: Translated: 783; Mature: 783
Protein sequence:
>783_residues MLYEIIKESKIAEPKISVIVPVYNVISYIDETINSLLSQTLKEIEIILVDDGSSDGSFERIIDYGERHDNICVAKEPNAG PGMARNNGLSIAKGKYISFVDSDDILPERALEIMYEAAEKEQVGVVTGISVSFNNSRSWFIGGHFKKGVFKKGRKSLLQN PEMLYTLGPCNKLYRRDMVQDIRFPNSIKVAEDHPFVIEAYLKSENIYTVDEIIYNYRAREDEGDISLSQIVTSDPYVSF KDIIASIKLSDALLKQYVTNPIALQKIRIDYYDRIISTDIWPAYKGILLSGSAETQIKMFDAFRELLDSMDFHLYNNLGV FQRLLTFETINRYTFIKEKARSSYLRAVRLAYEKLDPGSLNKLLSSEFPKEVRAGEKAAKRNSIKPIYNRLVTRKIGSTI KLGYEKVIAENWKKLSGVARNFYARRISFPFYKLAKKERKIVFLTNKHDVLADSFKAVYDEVILQKPDYKVVGYLKQPKR SILELLKMYKDIATAEYIFLDDYYRQIYGLTLRKDTEVIQLWHAAGAFKKFGFSSIGYADSNTESFERDAHKNYSKVVVS SSEIVPFYAEAFGVDEKNVLPLGVPRTDRFFNEEYKTYIKTVFEGKYPALKNKKIITYAPTFRGGPGERQQFIMNLNIRR LAEQLGDEYALILKMHPSVVRGVGIPFDLQEFAFNMSGEDINDVLINTDILITDYSSVVFDFSIMEKPILFYAYDLENYL GERNFYYNFEEFVPGPIVRTNEEVISAIKSNDFDLHKVRTFKERFFDDLDGHSAERIVKELIK
Sequences:
>Translated_783_residues MLYEIIKESKIAEPKISVIVPVYNVISYIDETINSLLSQTLKEIEIILVDDGSSDGSFERIIDYGERHDNICVAKEPNAG PGMARNNGLSIAKGKYISFVDSDDILPERALEIMYEAAEKEQVGVVTGISVSFNNSRSWFIGGHFKKGVFKKGRKSLLQN PEMLYTLGPCNKLYRRDMVQDIRFPNSIKVAEDHPFVIEAYLKSENIYTVDEIIYNYRAREDEGDISLSQIVTSDPYVSF KDIIASIKLSDALLKQYVTNPIALQKIRIDYYDRIISTDIWPAYKGILLSGSAETQIKMFDAFRELLDSMDFHLYNNLGV FQRLLTFETINRYTFIKEKARSSYLRAVRLAYEKLDPGSLNKLLSSEFPKEVRAGEKAAKRNSIKPIYNRLVTRKIGSTI KLGYEKVIAENWKKLSGVARNFYARRISFPFYKLAKKERKIVFLTNKHDVLADSFKAVYDEVILQKPDYKVVGYLKQPKR SILELLKMYKDIATAEYIFLDDYYRQIYGLTLRKDTEVIQLWHAAGAFKKFGFSSIGYADSNTESFERDAHKNYSKVVVS SSEIVPFYAEAFGVDEKNVLPLGVPRTDRFFNEEYKTYIKTVFEGKYPALKNKKIITYAPTFRGGPGERQQFIMNLNIRR LAEQLGDEYALILKMHPSVVRGVGIPFDLQEFAFNMSGEDINDVLINTDILITDYSSVVFDFSIMEKPILFYAYDLENYL GERNFYYNFEEFVPGPIVRTNEEVISAIKSNDFDLHKVRTFKERFFDDLDGHSAERIVKELIK >Mature_783_residues MLYEIIKESKIAEPKISVIVPVYNVISYIDETINSLLSQTLKEIEIILVDDGSSDGSFERIIDYGERHDNICVAKEPNAG PGMARNNGLSIAKGKYISFVDSDDILPERALEIMYEAAEKEQVGVVTGISVSFNNSRSWFIGGHFKKGVFKKGRKSLLQN PEMLYTLGPCNKLYRRDMVQDIRFPNSIKVAEDHPFVIEAYLKSENIYTVDEIIYNYRAREDEGDISLSQIVTSDPYVSF KDIIASIKLSDALLKQYVTNPIALQKIRIDYYDRIISTDIWPAYKGILLSGSAETQIKMFDAFRELLDSMDFHLYNNLGV FQRLLTFETINRYTFIKEKARSSYLRAVRLAYEKLDPGSLNKLLSSEFPKEVRAGEKAAKRNSIKPIYNRLVTRKIGSTI KLGYEKVIAENWKKLSGVARNFYARRISFPFYKLAKKERKIVFLTNKHDVLADSFKAVYDEVILQKPDYKVVGYLKQPKR SILELLKMYKDIATAEYIFLDDYYRQIYGLTLRKDTEVIQLWHAAGAFKKFGFSSIGYADSNTESFERDAHKNYSKVVVS SSEIVPFYAEAFGVDEKNVLPLGVPRTDRFFNEEYKTYIKTVFEGKYPALKNKKIITYAPTFRGGPGERQQFIMNLNIRR LAEQLGDEYALILKMHPSVVRGVGIPFDLQEFAFNMSGEDINDVLINTDILITDYSSVVFDFSIMEKPILFYAYDLENYL GERNFYYNFEEFVPGPIVRTNEEVISAIKSNDFDLHKVRTFKERFFDDLDGHSAERIVKELIK
Specific function: Is responsible for the polymerization of the ribitol-P chain during poly(ribitol phosphate)teichoic acid synthesis (Potential) [H]
COG id: COG1887
COG function: function code M; Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-glycerol glycerophosphotransferase family [H]
Homologues:
Organism=Escherichia coli, GI1790044, Length=108, Percent_Identity=38.8888888888889, Blast_Score=85, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007554 [H]
Pfam domain/function: PF04464 Glyphos_transf [H]
EC number: =2.7.8.14 [H]
Molecular weight: Translated: 90247; Mature: 90247
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYEIIKESKIAEPKISVIVPVYNVISYIDETINSLLSQTLKEIEIILVDDGSSDGSFER CHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHH IIDYGERHDNICVAKEPNAGPGMARNNGLSIAKGKYISFVDSDDILPERALEIMYEAAEK HHHCCCCCCCEEEEECCCCCCCCCCCCCCEEECCCEEEEECCCCCCHHHHHHHHHHHHCC EQVGVVTGISVSFNNSRSWFIGGHFKKGVFKKGRKSLLQNPEMLYTLGPCNKLYRRDMVQ CCCCEEEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH DIRFPNSIKVAEDHPFVIEAYLKSENIYTVDEIIYNYRAREDEGDISLSQIVTSDPYVSF HHCCCCCEEEECCCCEEEEEEECCCCCEEHHHHHHHHCCCCCCCCEEHHHHHCCCCCCCH KDIIASIKLSDALLKQYVTNPIALQKIRIDYYDRIISTDIWPAYKGILLSGSAETQIKMF HHHHHHHHHHHHHHHHHHCCCCEEHEEHHHHHHHHHHCCCCHHHCCEEEECCCCHHHHHH DAFRELLDSMDFHLYNNLGVFQRLLTFETINRYTFIKEKARSSYLRAVRLAYEKLDPGSL HHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH NKLLSSEFPKEVRAGEKAAKRNSIKPIYNRLVTRKIGSTIKLGYEKVIAENWKKLSGVAR HHHHHHCCCHHHHHCHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH NFYARRISFPFYKLAKKERKIVFLTNKHDVLADSFKAVYDEVILQKPDYKVVGYLKQPKR HHHHHHHCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHCHHH SILELLKMYKDIATAEYIFLDDYYRQIYGLTLRKDTEVIQLWHAAGAFKKFGFSSIGYAD HHHHHHHHHHHHHHHHEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC SNTESFERDAHKNYSKVVVSSSEIVPFYAEAFGVDEKNVLPLGVPRTDRFFNEEYKTYIK CCCHHHHHHHHCCHHEEEEECCCCCCHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHH TVFEGKYPALKNKKIITYAPTFRGGPGERQQFIMNLNIRRLAEQLGDEYALILKMHPSVV HHHCCCCCCCCCCEEEEECCCCCCCCCCHHHEEECCCHHHHHHHCCCCEEEEEEECHHHH RGVGIPFDLQEFAFNMSGEDINDVLINTDILITDYSSVVFDFSIMEKPILFYAYDLENYL HHCCCCCCHHHHHHCCCCCCCCCEEEECEEEEEECHHHHEEHHHHCCCEEEEEEEHHHHH GERNFYYNFEEFVPGPIVRTNEEVISAIKSNDFDLHKVRTFKERFFDDLDGHSAERIVKE CCCCCEECHHHHCCCCCEECCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH LIK HHC >Mature Secondary Structure MLYEIIKESKIAEPKISVIVPVYNVISYIDETINSLLSQTLKEIEIILVDDGSSDGSFER CHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHH IIDYGERHDNICVAKEPNAGPGMARNNGLSIAKGKYISFVDSDDILPERALEIMYEAAEK HHHCCCCCCCEEEEECCCCCCCCCCCCCCEEECCCEEEEECCCCCCHHHHHHHHHHHHCC EQVGVVTGISVSFNNSRSWFIGGHFKKGVFKKGRKSLLQNPEMLYTLGPCNKLYRRDMVQ CCCCEEEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH DIRFPNSIKVAEDHPFVIEAYLKSENIYTVDEIIYNYRAREDEGDISLSQIVTSDPYVSF HHCCCCCEEEECCCCEEEEEEECCCCCEEHHHHHHHHCCCCCCCCEEHHHHHCCCCCCCH KDIIASIKLSDALLKQYVTNPIALQKIRIDYYDRIISTDIWPAYKGILLSGSAETQIKMF HHHHHHHHHHHHHHHHHHCCCCEEHEEHHHHHHHHHHCCCCHHHCCEEEECCCCHHHHHH DAFRELLDSMDFHLYNNLGVFQRLLTFETINRYTFIKEKARSSYLRAVRLAYEKLDPGSL HHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH NKLLSSEFPKEVRAGEKAAKRNSIKPIYNRLVTRKIGSTIKLGYEKVIAENWKKLSGVAR HHHHHHCCCHHHHHCHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH NFYARRISFPFYKLAKKERKIVFLTNKHDVLADSFKAVYDEVILQKPDYKVVGYLKQPKR HHHHHHHCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHCHHH SILELLKMYKDIATAEYIFLDDYYRQIYGLTLRKDTEVIQLWHAAGAFKKFGFSSIGYAD HHHHHHHHHHHHHHHHEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC SNTESFERDAHKNYSKVVVSSSEIVPFYAEAFGVDEKNVLPLGVPRTDRFFNEEYKTYIK CCCHHHHHHHHCCHHEEEEECCCCCCHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHH TVFEGKYPALKNKKIITYAPTFRGGPGERQQFIMNLNIRRLAEQLGDEYALILKMHPSVV HHHCCCCCCCCCCEEEEECCCCCCCCCCHHHEEECCCHHHHHHHCCCCEEEEEEECHHHH RGVGIPFDLQEFAFNMSGEDINDVLINTDILITDYSSVVFDFSIMEKPILFYAYDLENYL HHCCCCCCHHHHHHCCCCCCCCCEEEECEEEEEECHHHHEEHHHHCCCEEEEEEEHHHHH GERNFYYNFEEFVPGPIVRTNEEVISAIKSNDFDLHKVRTFKERFFDDLDGHSAERIVKE CCCCCEECHHHHCCCCCEECCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH LIK HHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11882717 [H]