Definition Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession NC_008555
Length 2,814,130

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The map label for this gene is 116871820

Identifier: 116871820

GI number: 116871820

Start: 417874

End: 418464

Strand: Direct

Name: 116871820

Synonym: lwe0400

Alternate gene names: NA

Gene position: 417874-418464 (Clockwise)

Preceding gene: 116871819

Following gene: 116871821

Centisome position: 14.85

GC content: 29.44

Gene sequence:

>591_bases
ATGTCTAGTTTCATATCTTCAGGATGTGTATATAAACAAAGTTCATATAAAAACCTAGTCAAAAAATATATTGATTTGAT
AAGTAGTACAGCAAATGTGGAAATTGAAAATATAGTTTGTTATAGTCCGGAAAGCGACTTATCTAGCACTAAAAGTTTGG
AAGAAGTGAAAAAAGATAATAGTTTTTCAAAAGTGACTCATATTAATTGCAAGCAGATAAGAGATGATTGGGAATTTGTC
GTACGTTTCTATGAGGAACATAACTATCAAGGGGTTTTATTTGATCTATCGTATGATTACTTGCCTGAGATGTTTTCAGC
AAAAAGTTTGGAAAATAAATTAATCAGTATTTTAATAACTATTTATTCATATTATCCTTATTATTTTAGTTTTATTGACA
CAGAAGCAGAAGTGGATATGTTTCATAATCCTGGGAATATAGAACCTCTTGAAAGCCCATATGCAACATTAATTTATCCA
AAAAATAATGACTTTCATGTGTATCTAAATACTTGGGAAATTGACGGTATAAGTGAGAGGAAGAAAAAGCATTATGTTAT
TAAGAATACACCATCCCACCGAACAAACTAA

Upstream 100 bases:

>100_bases
AATTTCAGAGTTAGAAGACCTACTGAGGCTTATCCTAGCAAGAGTACCAGAGCTGTGAAATTCAGAATGAAGGAGAAGAA
AGTTTTTAGGAGGTGTGTGA

Downstream 100 bases:

>100_bases
AAAAGAATTGGGGAAACAGAGATAAATGATTCATTTAAAAGGTATAACTACTGCGGGTGCTTATGATAATCAAGGTAAAT
ATTTAGAAGAAATTCATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MSSFISSGCVYKQSSYKNLVKKYIDLISSTANVEIENIVCYSPESDLSSTKSLEEVKKDNSFSKVTHINCKQIRDDWEFV
VRFYEEHNYQGVLFDLSYDYLPEMFSAKSLENKLISILITIYSYYPYYFSFIDTEAEVDMFHNPGNIEPLESPYATLIYP
KNNDFHVYLNTWEIDGISERKKKHYVIKNTPSHRTN

Sequences:

>Translated_196_residues
MSSFISSGCVYKQSSYKNLVKKYIDLISSTANVEIENIVCYSPESDLSSTKSLEEVKKDNSFSKVTHINCKQIRDDWEFV
VRFYEEHNYQGVLFDLSYDYLPEMFSAKSLENKLISILITIYSYYPYYFSFIDTEAEVDMFHNPGNIEPLESPYATLIYP
KNNDFHVYLNTWEIDGISERKKKHYVIKNTPSHRTN
>Mature_195_residues
SSFISSGCVYKQSSYKNLVKKYIDLISSTANVEIENIVCYSPESDLSSTKSLEEVKKDNSFSKVTHINCKQIRDDWEFVV
RFYEEHNYQGVLFDLSYDYLPEMFSAKSLENKLISILITIYSYYPYYFSFIDTEAEVDMFHNPGNIEPLESPYATLIYPK
NNDFHVYLNTWEIDGISERKKKHYVIKNTPSHRTN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23025; Mature: 22894

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSFISSGCVYKQSSYKNLVKKYIDLISSTANVEIENIVCYSPESDLSSTKSLEEVKKDN
CCCCCCCCEEECHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCC
SFSKVTHINCKQIRDDWEFVVRFYEEHNYQGVLFDLSYDYLPEMFSAKSLENKLISILIT
CCCCEEECHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
IYSYYPYYFSFIDTEAEVDMFHNPGNIEPLESPYATLIYPKNNDFHVYLNTWEIDGISER
HHHHHHHHHEEECCCCCEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEEEEEECCCHHH
KKKHYVIKNTPSHRTN
HHCCEEEECCCCCCCC
>Mature Secondary Structure 
SSFISSGCVYKQSSYKNLVKKYIDLISSTANVEIENIVCYSPESDLSSTKSLEEVKKDN
CCCCCCCEEECHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCC
SFSKVTHINCKQIRDDWEFVVRFYEEHNYQGVLFDLSYDYLPEMFSAKSLENKLISILIT
CCCCEEECHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
IYSYYPYYFSFIDTEAEVDMFHNPGNIEPLESPYATLIYPKNNDFHVYLNTWEIDGISER
HHHHHHHHHEEECCCCCEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEEEEEECCCHHH
KKKHYVIKNTPSHRTN
HHCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA