Definition Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession NC_008555
Length 2,814,130

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The map label for this gene is 116871818

Identifier: 116871818

GI number: 116871818

Start: 416227

End: 416781

Strand: Direct

Name: 116871818

Synonym: lwe0398

Alternate gene names: NA

Gene position: 416227-416781 (Clockwise)

Preceding gene: 116871817

Following gene: 116871819

Centisome position: 14.79

GC content: 39.64

Gene sequence:

>555_bases
ATGTCCCCAAAATTCATGTACGAAAGATTACTAAAATGCCAAGAAGCAAATAAACTAGTAGCCATCTACGCGTCACGCGA
AGACGAATATTTCGAGGCGGGCTACATTGAAGCAGTTACAGCGAGTGATGTTATGTTCCGCTCGCGACGTTCGGACGGTT
ACGAAGAGGGACATGTTGTTCTCCCGTTAGAATTAGTGTATCGAATAGAAATTGACACGGCGCATTTAAAAACAGCCGAA
CTACTCGCAAAACATCTTAATCAACCAATCAGCGCAGGATTATTTGAGAAAGCACCAAACAAAAAGCATTCTCTTTTCGA
AATTGCCGCTGATTATGTATACCAAAGTAAAGAGATAATCTTTATTGACATTATTGGAGACGAGACGCCAGCAATTGGAA
TGATCGCTGAAAACGAATATGAAGGATTAGAAATTACTTTAGTGGATGACGAAGGTCGATTAGATGGAACTTGTTGGATA
AAAAAAGAAGATATTCTAGCCCTGCGTTTCGGCGGCAGTGTAGAACAAGATTTGATGAACAAACTAAAAAAATAA

Upstream 100 bases:

>100_bases
CGTTTTCGATGTGACAGCAGTAGCATTATTTGGTAAGGGGAGTGAAGCAGTAACTTTTTTAGAATCATTCCACTAAACAT
AAGTTGGTGTGTTACAGAAA

Downstream 100 bases:

>100_bases
ACTAAGAATAAGCCCTCCACTTTTATAGGAGGGCTTATTATAAAAGTAAGAGAAGTAAATAACCAAATTAGGAGATTGAA
ATGGATTCAATTTTGAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MSPKFMYERLLKCQEANKLVAIYASREDEYFEAGYIEAVTASDVMFRSRRSDGYEEGHVVLPLELVYRIEIDTAHLKTAE
LLAKHLNQPISAGLFEKAPNKKHSLFEIAADYVYQSKEIIFIDIIGDETPAIGMIAENEYEGLEITLVDDEGRLDGTCWI
KKEDILALRFGGSVEQDLMNKLKK

Sequences:

>Translated_184_residues
MSPKFMYERLLKCQEANKLVAIYASREDEYFEAGYIEAVTASDVMFRSRRSDGYEEGHVVLPLELVYRIEIDTAHLKTAE
LLAKHLNQPISAGLFEKAPNKKHSLFEIAADYVYQSKEIIFIDIIGDETPAIGMIAENEYEGLEITLVDDEGRLDGTCWI
KKEDILALRFGGSVEQDLMNKLKK
>Mature_183_residues
SPKFMYERLLKCQEANKLVAIYASREDEYFEAGYIEAVTASDVMFRSRRSDGYEEGHVVLPLELVYRIEIDTAHLKTAEL
LAKHLNQPISAGLFEKAPNKKHSLFEIAADYVYQSKEIIFIDIIGDETPAIGMIAENEYEGLEITLVDDEGRLDGTCWIK
KEDILALRFGGSVEQDLMNKLKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20956; Mature: 20825

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPKFMYERLLKCQEANKLVAIYASREDEYFEAGYIEAVTASDVMFRSRRSDGYEEGHVV
CCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEEHHHHHHHHHCCCCCCCCEEE
LPLELVYRIEIDTAHLKTAELLAKHLNQPISAGLFEKAPNKKHSLFEIAADYVYQSKEII
EEEEEEEEEEECHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCEE
FIDIIGDETPAIGMIAENEYEGLEITLVDDEGRLDGTCWIKKEDILALRFGGSVEQDLMN
EEEEECCCCCEEEEEECCCCCCEEEEEECCCCCCCCEEEEECCCEEEEEECCCCHHHHHH
KLKK
HHCC
>Mature Secondary Structure 
SPKFMYERLLKCQEANKLVAIYASREDEYFEAGYIEAVTASDVMFRSRRSDGYEEGHVV
CCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEEHHHHHHHHHCCCCCCCCEEE
LPLELVYRIEIDTAHLKTAELLAKHLNQPISAGLFEKAPNKKHSLFEIAADYVYQSKEII
EEEEEEEEEEECHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCEE
FIDIIGDETPAIGMIAENEYEGLEITLVDDEGRLDGTCWIKKEDILALRFGGSVEQDLMN
EEEEECCCCCEEEEEECCCCCCEEEEEECCCCCCCCEEEEECCCEEEEEECCCCHHHHHH
KLKK
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA