Definition Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession NC_008555
Length 2,814,130

Click here to switch to the map view.

The map label for this gene is 116871495

Identifier: 116871495

GI number: 116871495

Start: 71754

End: 72623

Strand: Direct

Name: 116871495

Synonym: lwe0073

Alternate gene names: NA

Gene position: 71754-72623 (Clockwise)

Preceding gene: 116871494

Following gene: 116871496

Centisome position: 2.55

GC content: 35.06

Gene sequence:

>870_bases
ATGAAGAAAAAAATCATTGGTTTATTGGCGAGTTTATTATTATTAGGAGGATGTTTCAATTTAAACGAGAAAACCGAACA
AGAAAAAGCGCAAGAAGTCACGACGCCTGTGCAGGATTATGTGGGGCAAGGATATTCATTTGTGGACGGGAATAAATCGG
CAGAACGAGTGAAACAGCATGAGAAAGAGATTAAACAAGTAGCGATAGATTACATGAAAAGAAAATATAAAACAGTCGTA
GAAGTTACTAATGTAGTGCCTGCGCGCAATGCGGCAGTTGTTATCGTAAAATGCAATGAACCAATTCAATTTACAACATC
TGTTACGGTGGGATTTATTTTAAACAAGGATGAAGTAGGGTTTCCTAAAGAAGAGGAAGGCGAAATTGAGCAAGCTGTAT
TAGGTGGCTTGTATGCGAAGGCATATGAGGCAGAATTTAAACAATTAAATGATGTTGCAGGAAAATTAGCCAAAAAATAT
GATTTGGTAGGAATGACGGATGAAGCGTTAGTAAAATCATCTCCCTATGGAAATCAAGGAAATCACTATTTTATTGCACT
ATCATATCGAGAGTACTCTAGTGTATATAATGCGTATATAGAAAACCCTCAAATTTCAGCAGAGGAATTACGAATTCTAT
TCACAAAAGATGATCCTACCAGCGGAAATTTAACCATAGTAATGAAATTCTTCTCAAAAGAAGATAAATTACCTAAACAA
GAAGTGGTAGATAATTTAGCAAAAGATTTCCAGCAAGAATTAGGATTACCAAAAGGAAACTATCCATTTGTAATATATAA
GAACCTTATAATAAACAGGGTAGGGCTTCCAGATGGAGAGAATATAGAGGCAGAAATATCAGTTAAATGA

Upstream 100 bases:

>100_bases
ATAAGATAGCTCCTCAAGAACTGTATCTACTATTAGAAGGAAGTGCAGAAAAGTTTAAGATACCAAAAAGAATAAAATAC
AAAAGCAAACAGGAGAAGAG

Downstream 100 bases:

>100_bases
GAAGGAGTTAATCAAAGATGACAACAAATTTAAAAACACCTGATACTGATTTAATTGAGAAATGGGTATATAAACACCTG
AAAAAATTGAAAACTATATG

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MKKKIIGLLASLLLLGGCFNLNEKTEQEKAQEVTTPVQDYVGQGYSFVDGNKSAERVKQHEKEIKQVAIDYMKRKYKTVV
EVTNVVPARNAAVVIVKCNEPIQFTTSVTVGFILNKDEVGFPKEEEGEIEQAVLGGLYAKAYEAEFKQLNDVAGKLAKKY
DLVGMTDEALVKSSPYGNQGNHYFIALSYREYSSVYNAYIENPQISAEELRILFTKDDPTSGNLTIVMKFFSKEDKLPKQ
EVVDNLAKDFQQELGLPKGNYPFVIYKNLIINRVGLPDGENIEAEISVK

Sequences:

>Translated_289_residues
MKKKIIGLLASLLLLGGCFNLNEKTEQEKAQEVTTPVQDYVGQGYSFVDGNKSAERVKQHEKEIKQVAIDYMKRKYKTVV
EVTNVVPARNAAVVIVKCNEPIQFTTSVTVGFILNKDEVGFPKEEEGEIEQAVLGGLYAKAYEAEFKQLNDVAGKLAKKY
DLVGMTDEALVKSSPYGNQGNHYFIALSYREYSSVYNAYIENPQISAEELRILFTKDDPTSGNLTIVMKFFSKEDKLPKQ
EVVDNLAKDFQQELGLPKGNYPFVIYKNLIINRVGLPDGENIEAEISVK
>Mature_289_residues
MKKKIIGLLASLLLLGGCFNLNEKTEQEKAQEVTTPVQDYVGQGYSFVDGNKSAERVKQHEKEIKQVAIDYMKRKYKTVV
EVTNVVPARNAAVVIVKCNEPIQFTTSVTVGFILNKDEVGFPKEEEGEIEQAVLGGLYAKAYEAEFKQLNDVAGKLAKKY
DLVGMTDEALVKSSPYGNQGNHYFIALSYREYSSVYNAYIENPQISAEELRILFTKDDPTSGNLTIVMKFFSKEDKLPKQ
EVVDNLAKDFQQELGLPKGNYPFVIYKNLIINRVGLPDGENIEAEISVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32412; Mature: 32412

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKIIGLLASLLLLGGCFNLNEKTEQEKAQEVTTPVQDYVGQGYSFVDGNKSAERVKQH
CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCEEECCCCHHHHHHHH
EKEIKQVAIDYMKRKYKTVVEVTNVVPARNAAVVIVKCNEPIQFTTSVTVGFILNKDEVG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEEEEEEEECCCCCC
FPKEEEGEIEQAVLGGLYAKAYEAEFKQLNDVAGKLAKKYDLVGMTDEALVKSSPYGNQG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCC
NHYFIALSYREYSSVYNAYIENPQISAEELRILFTKDDPTSGNLTIVMKFFSKEDKLPKQ
CEEEEEEEHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCHH
EVVDNLAKDFQQELGLPKGNYPFVIYKNLIINRVGLPDGENIEAEISVK
HHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHCCCCCCCCCCEEEEEC
>Mature Secondary Structure
MKKKIIGLLASLLLLGGCFNLNEKTEQEKAQEVTTPVQDYVGQGYSFVDGNKSAERVKQH
CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCEEECCCCHHHHHHHH
EKEIKQVAIDYMKRKYKTVVEVTNVVPARNAAVVIVKCNEPIQFTTSVTVGFILNKDEVG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEEEEEEEECCCCCC
FPKEEEGEIEQAVLGGLYAKAYEAEFKQLNDVAGKLAKKYDLVGMTDEALVKSSPYGNQG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCC
NHYFIALSYREYSSVYNAYIENPQISAEELRILFTKDDPTSGNLTIVMKFFSKEDKLPKQ
CEEEEEEEHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCHH
EVVDNLAKDFQQELGLPKGNYPFVIYKNLIINRVGLPDGENIEAEISVK
HHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA