| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
Click here to switch to the map view.
The map label for this gene is 116696106
Identifier: 116696106
GI number: 116696106
Start: 2457396
End: 2458565
Strand: Direct
Name: 116696106
Synonym: H16_B2170
Alternate gene names: NA
Gene position: 2457396-2458565 (Clockwise)
Preceding gene: 116696105
Following gene: 116696107
Centisome position: 84.37
GC content: 65.98
Gene sequence:
>1170_bases TTGGCTATTCCGCTACTGCAGGTCGCCCGCGTGGGCGCCTACATCGTCGGCAAGCATCTGTCGCGACAGAAGCGCTATCC GCTTGCCCTGATGCTGGAACCGCTGTTCCGCTGCAACCTGGCGTGCTCAGGCTGCGGCAAGATCGATTATCCGGATCCCA TCCTGAACCAGCGCCTGTCGGTGCAGGAATGCCTGGAGGCGGTGGATGAATGCGGTGCCCCGGTGGTGTCCATCGCCGGC GGCGAGCCGCTGCTGCACAAGGACATGCCGCAGATCGTGCAAGGCATCATCGCGCGGCGCAAGTTCGTCTACCTGTGCAC CAATGCGCTGCTGATGGAAAAGAAGCTGGACCAGTACCAGCCCAGCCCGTATTTCATCTGGTCGGTGCACCTGGACGGCG ACCGCGAGATGCATGACCGCTCGGTGTGCCAGGAAGGCGTGTACGACCGCTGCGTCGAGGCAATCCGGCTGGCCAAGCAA CGGGGTTTCCGCGTCAATATCAACTGCACGCTGTTCAACGATGCCCAGCCCGAGCGCGTGGCGAAGTTCTTCGACTCGGT CAAGGCGCTGGGCGTGGACGGCATCACCGTGTCGCCTGGCTATGCCTATGAACGCGCGCCGGACCAGCAGCACTTCCTGA ACCGCGGCAAGACCCGCCAGCTGTTTCGCGACATCCTCAGCCGCGGCCGCGCCGGCAAGAACTGGGCCTTCAGCCAGTCG ACGCTGTTCCTGGACTTCCTGGCCGGCAACCAGACCTACCACTGCACCCCGTGGGGCAACCCGGCGCGCACCGTATTCGG CTGGCAGCGTCCGTGCTACCTGGTGGGCGAGGGCTATGCCGCCACCTTCCGCGAGCTGATGGAAGAAACCGACTGGGACG CCTACGGCACCGGCAACTACGAGAAGTGCGCCGACTGCATGGTCCACAGCGGCTATGAGGCCACCGCCGTGGCCGACACC TTTGCCCATCCGCTCAAGGCGCTGGGCGTGAGCCTGCGCGGCGTGCGCACCAGCGGGCCGATGGCGCCCGATATTGCGCT GGACCGGCAGCGGCCGGCGGAATACGTGTTCTCGCGCCACGTCGAGATCAAGCTCGAGGAAATCCAGCGCGCGAAACCGC GCGCCAACCGGCCGCGGCCGGCCGAGGCCAACGCCGCGGCCACGCACTGA
Upstream 100 bases:
>100_bases GGCCCCGCGCAAGGCCGGCAAGGAACCCGCCGCAGTCGCGGCCGCACCGGCCACCGCCAACGAGAATATCGCCGGCTGAA CCCAACCAGAGGAAGCTGCC
Downstream 100 bases:
>100_bases CCGCACTACCGATGGCCGCGGAACTTGCCGCCACCCTCCCAGGCGCTGCGCTGACCTGCGTGTCGGCGGCCTATGCGCTG GCCGCGGCCTGGCTGTCGCA
Product: Fe-S oxidoreductase
Products: NA
Alternate protein names: Radical SAM Domain-Containing Protein; Radical SAM Family Protein; Radical SAM Domain Protein; Molybdenum Cofactor Biosynthesis Protein A; MoaA/NifB/PqqE Family Protein; Fe-S Oxidoreductase; MoaA NifB PqqE Radical SAM Superfamily Protein; Co PQQ Synthesis Protein E; Co PQQ Synthesis Protein; Radical S-Adenosylmethionine Superfamily Protein; Iron-Sulfur Oxidoreductase; MoaA/NifB/PqqE Family Fe-S Oxidoreductase; Radical SAM Oxidoreductase; Heme D1 Biosynthesis Protein NirJ; Heme D1 Biosynthesis Protein; Hopanoid Biosynthesis Associated Radical SAM Protein; Radical SAM Superfamily Protein; Heme Biosynthesis Protein; Radical SAM Protein; Radical SAM Superfamily; Radical SAM; Radical SAM Family Fe-S Protein
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MAIPLLQVARVGAYIVGKHLSRQKRYPLALMLEPLFRCNLACSGCGKIDYPDPILNQRLSVQECLEAVDECGAPVVSIAG GEPLLHKDMPQIVQGIIARRKFVYLCTNALLMEKKLDQYQPSPYFIWSVHLDGDREMHDRSVCQEGVYDRCVEAIRLAKQ RGFRVNINCTLFNDAQPERVAKFFDSVKALGVDGITVSPGYAYERAPDQQHFLNRGKTRQLFRDILSRGRAGKNWAFSQS TLFLDFLAGNQTYHCTPWGNPARTVFGWQRPCYLVGEGYAATFRELMEETDWDAYGTGNYEKCADCMVHSGYEATAVADT FAHPLKALGVSLRGVRTSGPMAPDIALDRQRPAEYVFSRHVEIKLEEIQRAKPRANRPRPAEANAAATH
Sequences:
>Translated_389_residues MAIPLLQVARVGAYIVGKHLSRQKRYPLALMLEPLFRCNLACSGCGKIDYPDPILNQRLSVQECLEAVDECGAPVVSIAG GEPLLHKDMPQIVQGIIARRKFVYLCTNALLMEKKLDQYQPSPYFIWSVHLDGDREMHDRSVCQEGVYDRCVEAIRLAKQ RGFRVNINCTLFNDAQPERVAKFFDSVKALGVDGITVSPGYAYERAPDQQHFLNRGKTRQLFRDILSRGRAGKNWAFSQS TLFLDFLAGNQTYHCTPWGNPARTVFGWQRPCYLVGEGYAATFRELMEETDWDAYGTGNYEKCADCMVHSGYEATAVADT FAHPLKALGVSLRGVRTSGPMAPDIALDRQRPAEYVFSRHVEIKLEEIQRAKPRANRPRPAEANAAATH >Mature_388_residues AIPLLQVARVGAYIVGKHLSRQKRYPLALMLEPLFRCNLACSGCGKIDYPDPILNQRLSVQECLEAVDECGAPVVSIAGG EPLLHKDMPQIVQGIIARRKFVYLCTNALLMEKKLDQYQPSPYFIWSVHLDGDREMHDRSVCQEGVYDRCVEAIRLAKQR GFRVNINCTLFNDAQPERVAKFFDSVKALGVDGITVSPGYAYERAPDQQHFLNRGKTRQLFRDILSRGRAGKNWAFSQST LFLDFLAGNQTYHCTPWGNPARTVFGWQRPCYLVGEGYAATFRELMEETDWDAYGTGNYEKCADCMVHSGYEATAVADTF AHPLKALGVSLRGVRTSGPMAPDIALDRQRPAEYVFSRHVEIKLEEIQRAKPRANRPRPAEANAAATH
Specific function: Unknown
COG id: COG0535
COG function: function code R; Predicted Fe-S oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43720; Mature: 43589
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIPLLQVARVGAYIVGKHLSRQKRYPLALMLEPLFRCNLACSGCGKIDYPDPILNQRLS CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCC VQECLEAVDECGAPVVSIAGGEPLLHKDMPQIVQGIIARRKFVYLCTNALLMEKKLDQYQ HHHHHHHHHHCCCCEEEECCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PSPYFIWSVHLDGDREMHDRSVCQEGVYDRCVEAIRLAKQRGFRVNINCTLFNDAQPERV CCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHH AKFFDSVKALGVDGITVSPGYAYERAPDQQHFLNRGKTRQLFRDILSRGRAGKNWAFSQS HHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCC TLFLDFLAGNQTYHCTPWGNPARTVFGWQRPCYLVGEGYAATFRELMEETDWDAYGTGNY EEEEEEECCCCEEEECCCCCCCHHHCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCH EKCADCMVHSGYEATAVADTFAHPLKALGVSLRGVRTSGPMAPDIALDRQRPAEYVFSRH HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHCCEECCCCCCCCCCCCCCCCHHHHHHCC VEIKLEEIQRAKPRANRPRPAEANAAATH CEEEHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AIPLLQVARVGAYIVGKHLSRQKRYPLALMLEPLFRCNLACSGCGKIDYPDPILNQRLS CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCC VQECLEAVDECGAPVVSIAGGEPLLHKDMPQIVQGIIARRKFVYLCTNALLMEKKLDQYQ HHHHHHHHHHCCCCEEEECCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PSPYFIWSVHLDGDREMHDRSVCQEGVYDRCVEAIRLAKQRGFRVNINCTLFNDAQPERV CCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHH AKFFDSVKALGVDGITVSPGYAYERAPDQQHFLNRGKTRQLFRDILSRGRAGKNWAFSQS HHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCC TLFLDFLAGNQTYHCTPWGNPARTVFGWQRPCYLVGEGYAATFRELMEETDWDAYGTGNY EEEEEEECCCCEEEECCCCCCCHHHCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCH EKCADCMVHSGYEATAVADTFAHPLKALGVSLRGVRTSGPMAPDIALDRQRPAEYVFSRH HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHCCEECCCCCCCCCCCCCCCCHHHHHHCC VEIKLEEIQRAKPRANRPRPAEANAAATH CEEEHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA