| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is 116696107
Identifier: 116696107
GI number: 116696107
Start: 2458625
End: 2459929
Strand: Direct
Name: 116696107
Synonym: H16_B2171
Alternate gene names: NA
Gene position: 2458625-2459929 (Clockwise)
Preceding gene: 116696106
Following gene: 116696108
Centisome position: 84.42
GC content: 69.35
Gene sequence:
>1305_bases GTGTCGGCGGCCTATGCGCTGGCCGCGGCCTGGCTGTCGCATCGCGCGCCGGCGGCAAGCGGCGGCACCGCGACGACGCC GGTCAGCGTGCTCAAGCCGCTGTGCGGCGCCGAGCCCCGGCTGTACGAGAACCTGGCCACGCTGTGCCGGCAGCGGCATC CGTCGTTCCAGCTGGTATTCGGCGTGCATGCCGCGGACGATCCCGCCATCGCCGTGGTCGAACGGCTGCGCCGCGACTTC CCGGCGTGCGACATCGCGCTGGTGGTCGATCCGCAAGTGCACGGCACCAACCTGAAAGTCAGCAACCTGGTCAACCTGTT CGCACAAGCGAAGCACGATGTGCTGGTGATCGCCGACAGCGATATCGCCGTGCCGCCCGACTACCTGGCGCGCGTGACCG CGCCGCTGGCCGACGCCGGCGTGGGCGTGGTCACCTGCCTCTACCGCGGCAATCCGACTGGCGGGCGGTGGTCGCGCATC GGCGCGCAGTTCATCAACGACTGGTTCGCGCCGTCGGTGCGCATCGCCCACGCGGGCGGCTCGCAACGCTTTGCCTTTGG CGCGACGATTGCGCTGCGGCGGGATGCGCTGGTTTCGGTCGGCGGGTTCGAGGTATTGGCGGACCGGCTGGCGGATGACT TCTGGCTGGGCGAGCTGACGCGGCGACAAGGGTTGCGCACGGTGCTGTCAGACGTGGTGGTCAGCACCGATGTCACCGAG GAACACTTTGCCGACCTTTGGCGGCATGAGGTGCGCTGGCTGCGCACGATAAGGTCGCTCAATCCGCTGGGTTTTGCCTT CACCTTTATTACCTTCACCTGGCCGATGCTGGTGCTGGGCGTATTGCTGGCGCCGCTCCCTGCTGTTCTTGCCCTGGCGA CCCTCGGCGTGATCGCGCGCAGCATGATGGCGGGCAGCGTGGCCGCTGCGTTGCGCGCGCCGTTGCGCGATGCGATGCTG CTGGCCGGCTGGGCCGTTGCGCTGACGGGCAAGCGCGTGCGGTGGCGCGAGCAGGTGCTGCCGGTACATGATGGGCAGCA CTCCGGGCGAGCGCCTGCCCTCTCCCCCGCCCCTCTCCCGCAAGCGGGCGAGGGGAGAAAACAGGCGGACAGGGAGCCGC CATCGCGTTATTCCGCACGCCGTCCTGCGGCAGCGTCCGTTGATGTGACGACGTTGAACGCAGCGGCGGTTCGCTCCCCT CTCCCGCCTGCGGGAGAGGGGCCGGGGGAGAGGGCCGGCGTATCCACGAAGTCCCCACCCCCAACCCCACCCTTCACCGG CATCCATCCCCAGAGGCCGCAATGA
Upstream 100 bases:
>100_bases GGCCGCGGCCGGCCGAGGCCAACGCCGCGGCCACGCACTGACCGCACTACCGATGGCCGCGGAACTTGCCGCCACCCTCC CAGGCGCTGCGCTGACCTGC
Downstream 100 bases:
>100_bases AAAAAACCCTGTTCCTCCAGGCCCCTTCCTTCGACGGCTTCGACGGCGGCGCGGGCTCGCGCTACCAGGCCAAGCGCGAG ATCAAGTCGTTCTGGTACCC
Product: cell wall biosynthesis glycosyltransferase
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyl Transferase Family Protein; Glucosyltransferase; Cell Wall Biosynthesis Glycosyltransferase-Like Protein; Glycosyl Transferase Group 2 Family; Glycosyl Transferase; Cell Wall Biosynthesis Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein; Acyl-CoA Dehydrogenase-Like; Acyl-CoA Dehydrogenase-Like Protein; UDP-GlucoseCeramide Glycosyltransferase; Glycosyltransferase Family; Glycosyl Transferase Protein; Glycosyl Tranferase Homolog; Syl Transferase Group 2 Family Protein; Family 2 Glycosyl Transferase; Putatiave Glycosyltransferase
Number of amino acids: Translated: 434; Mature: 433
Protein sequence:
>434_residues MSAAYALAAAWLSHRAPAASGGTATTPVSVLKPLCGAEPRLYENLATLCRQRHPSFQLVFGVHAADDPAIAVVERLRRDF PACDIALVVDPQVHGTNLKVSNLVNLFAQAKHDVLVIADSDIAVPPDYLARVTAPLADAGVGVVTCLYRGNPTGGRWSRI GAQFINDWFAPSVRIAHAGGSQRFAFGATIALRRDALVSVGGFEVLADRLADDFWLGELTRRQGLRTVLSDVVVSTDVTE EHFADLWRHEVRWLRTIRSLNPLGFAFTFITFTWPMLVLGVLLAPLPAVLALATLGVIARSMMAGSVAAALRAPLRDAML LAGWAVALTGKRVRWREQVLPVHDGQHSGRAPALSPAPLPQAGEGRKQADREPPSRYSARRPAAASVDVTTLNAAAVRSP LPPAGEGPGERAGVSTKSPPPTPPFTGIHPQRPQ
Sequences:
>Translated_434_residues MSAAYALAAAWLSHRAPAASGGTATTPVSVLKPLCGAEPRLYENLATLCRQRHPSFQLVFGVHAADDPAIAVVERLRRDF PACDIALVVDPQVHGTNLKVSNLVNLFAQAKHDVLVIADSDIAVPPDYLARVTAPLADAGVGVVTCLYRGNPTGGRWSRI GAQFINDWFAPSVRIAHAGGSQRFAFGATIALRRDALVSVGGFEVLADRLADDFWLGELTRRQGLRTVLSDVVVSTDVTE EHFADLWRHEVRWLRTIRSLNPLGFAFTFITFTWPMLVLGVLLAPLPAVLALATLGVIARSMMAGSVAAALRAPLRDAML LAGWAVALTGKRVRWREQVLPVHDGQHSGRAPALSPAPLPQAGEGRKQADREPPSRYSARRPAAASVDVTTLNAAAVRSP LPPAGEGPGERAGVSTKSPPPTPPFTGIHPQRPQ >Mature_433_residues SAAYALAAAWLSHRAPAASGGTATTPVSVLKPLCGAEPRLYENLATLCRQRHPSFQLVFGVHAADDPAIAVVERLRRDFP ACDIALVVDPQVHGTNLKVSNLVNLFAQAKHDVLVIADSDIAVPPDYLARVTAPLADAGVGVVTCLYRGNPTGGRWSRIG AQFINDWFAPSVRIAHAGGSQRFAFGATIALRRDALVSVGGFEVLADRLADDFWLGELTRRQGLRTVLSDVVVSTDVTEE HFADLWRHEVRWLRTIRSLNPLGFAFTFITFTWPMLVLGVLLAPLPAVLALATLGVIARSMMAGSVAAALRAPLRDAMLL AGWAVALTGKRVRWREQVLPVHDGQHSGRAPALSPAPLPQAGEGRKQADREPPSRYSARRPAAASVDVTTLNAAAVRSPL PPAGEGPGERAGVSTKSPPPTPPFTGIHPQRPQ
Specific function: Unknown
COG id: COG1215
COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4507811, Length=231, Percent_Identity=27.7056277056277, Blast_Score=92, Evalue=1e-18, Organism=Caenorhabditis elegans, GI25147526, Length=242, Percent_Identity=27.6859504132231, Blast_Score=98, Evalue=1e-20, Organism=Caenorhabditis elegans, GI25149580, Length=231, Percent_Identity=24.6753246753247, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI25149577, Length=231, Percent_Identity=24.6753246753247, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI25149574, Length=231, Percent_Identity=24.6753246753247, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI32564728, Length=231, Percent_Identity=24.6753246753247, Blast_Score=86, Evalue=4e-17, Organism=Caenorhabditis elegans, GI32566973, Length=207, Percent_Identity=27.0531400966184, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24657569, Length=207, Percent_Identity=28.5024154589372, Blast_Score=86, Evalue=5e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46360; Mature: 46229
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAAYALAAAWLSHRAPAASGGTATTPVSVLKPLCGAEPRLYENLATLCRQRHPSFQLVF CCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEE GVHAADDPAIAVVERLRRDFPACDIALVVDPQVHGTNLKVSNLVNLFAQAKHDVLVIADS EEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEHHHHHHHHHHCCCCEEEEECC DIAVPPDYLARVTAPLADAGVGVVTCLYRGNPTGGRWSRIGAQFINDWFAPSVRIAHAGG CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCC SQRFAFGATIALRRDALVSVGGFEVLADRLADDFWLGELTRRQGLRTVLSDVVVSTDVTE CCEEEEEEHHEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH EHFADLWRHEVRWLRTIRSLNPLGFAFTFITFTWPMLVLGVLLAPLPAVLALATLGVIAR HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SMMAGSVAAALRAPLRDAMLLAGWAVALTGKRVRWREQVLPVHDGQHSGRAPALSPAPLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC QAGEGRKQADREPPSRYSARRPAAASVDVTTLNAAAVRSPLPPAGEGPGERAGVSTKSPP CCCCCCHHHCCCCCHHHHCCCCCCCEEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCCCC PTPPFTGIHPQRPQ CCCCCCCCCCCCCC >Mature Secondary Structure SAAYALAAAWLSHRAPAASGGTATTPVSVLKPLCGAEPRLYENLATLCRQRHPSFQLVF CHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEE GVHAADDPAIAVVERLRRDFPACDIALVVDPQVHGTNLKVSNLVNLFAQAKHDVLVIADS EEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEHHHHHHHHHHCCCCEEEEECC DIAVPPDYLARVTAPLADAGVGVVTCLYRGNPTGGRWSRIGAQFINDWFAPSVRIAHAGG CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCC SQRFAFGATIALRRDALVSVGGFEVLADRLADDFWLGELTRRQGLRTVLSDVVVSTDVTE CCEEEEEEHHEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH EHFADLWRHEVRWLRTIRSLNPLGFAFTFITFTWPMLVLGVLLAPLPAVLALATLGVIAR HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SMMAGSVAAALRAPLRDAMLLAGWAVALTGKRVRWREQVLPVHDGQHSGRAPALSPAPLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC QAGEGRKQADREPPSRYSARRPAAASVDVTTLNAAAVRSPLPPAGEGPGERAGVSTKSPP CCCCCCHHHCCCCCHHHHCCCCCCCEEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCCCC PTPPFTGIHPQRPQ CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA