| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is 116695890
Identifier: 116695890
GI number: 116695890
Start: 2205234
End: 2206040
Strand: Direct
Name: 116695890
Synonym: H16_B1954
Alternate gene names: NA
Gene position: 2205234-2206040 (Clockwise)
Preceding gene: 116695889
Following gene: 116695891
Centisome position: 75.72
GC content: 68.03
Gene sequence:
>807_bases ATGCTGTCCGCGCTGATGCACGCGTCGTGGAACGCCATCGTCAAGATCGGCGGCGACCGCTTGTCGTCGATGGCTCTGAT CGACACCTTCTGCCTGCTGGTGGCCTTGCCCTTCCTGTTCCTGGTGCCCCTGCCCGCGCCGCAGGTGTGGCCCTTCCTGC TGGCCACAGTGGCGCTGGAAGTCGGCTACAAGCTGTCGCTGGTGGCTGCCTACAACCGTGGTGACTTCAGCCAGGCCTAT CCGCTGATGCGCGGCTCGGCGCCGATGATGGTGGCGATCCTGCTGCTGCTGGCCGGCAGCGAACGGCTGGGGCCAGGCGG CTATGCCGGCATCGCGCTGATCTGCTGCGGGCTGGTCAGCCTGGTGCGCTGGCGCCGGCAATCGCCCGACCTGCTCGGCT TTGCGCTGCTGGCCGGGGCCTGCCTGGCGGCCGGCACCGTGATCGACGGCACCGCGGTCAAGCGCTACGGCGAGGTCTTC ACCTACATCGTCTGGCTGCAGGCGATGTCGCACATCTTCATGCCGACCTACGCCTTCAGCCGGCGCGGCAACGCGCTGGT CACGCTGATGCGCACGGAATGGAAGCGCGCGTGGATCGGCGGCATCAACCGGGTGGGCTCGTATGCGCTGATGCTGTGGG CGATGACCATGGCGCCCGTGACCAAGCTGGCTGCGCTGCGTGAATCGAGCGTGATCTTTGCCGCGCTGCTGGGCCACTTC CTGCTGCGCGAGCCCTTCGACCGGCGGCGGCTGATTGCGACCGCGCTGGTCCTGGCGGGGATCCTGACACTGCAACTGGC GCGCTGA
Upstream 100 bases:
>100_bases CTCTCCCGCGAGCGGGAGAGGGGAGCAAACCATCGGTTCGCAAACTCAACCCTTCATGCCCCTCCCCCCAGACTTTCACG GCCTCGCCTTTGCCGCCGTG
Downstream 100 bases:
>100_bases TCCGTCGACGTATGTTGCATTTTGTGTTGTTTGTTGGCGTTTTTTTGCATAACATGGCAGGCAACGCCAAACCCTTTCCT GCCGAGGTTTTCCCGCCATG
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Integral Membrane; Small Multidrug Resistance Protein; Inner Membrane Protein; Transporter Of DMT Superfamily; Transporter Dme Family; DMT Family Permease; Transporter Permease Protein; Drug/Metabolite Transporter Superfamily Permease; Drug/Metabolite Exporter Family Protein; Permease Protein
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MLSALMHASWNAIVKIGGDRLSSMALIDTFCLLVALPFLFLVPLPAPQVWPFLLATVALEVGYKLSLVAAYNRGDFSQAY PLMRGSAPMMVAILLLLAGSERLGPGGYAGIALICCGLVSLVRWRRQSPDLLGFALLAGACLAAGTVIDGTAVKRYGEVF TYIVWLQAMSHIFMPTYAFSRRGNALVTLMRTEWKRAWIGGINRVGSYALMLWAMTMAPVTKLAALRESSVIFAALLGHF LLREPFDRRRLIATALVLAGILTLQLAR
Sequences:
>Translated_268_residues MLSALMHASWNAIVKIGGDRLSSMALIDTFCLLVALPFLFLVPLPAPQVWPFLLATVALEVGYKLSLVAAYNRGDFSQAY PLMRGSAPMMVAILLLLAGSERLGPGGYAGIALICCGLVSLVRWRRQSPDLLGFALLAGACLAAGTVIDGTAVKRYGEVF TYIVWLQAMSHIFMPTYAFSRRGNALVTLMRTEWKRAWIGGINRVGSYALMLWAMTMAPVTKLAALRESSVIFAALLGHF LLREPFDRRRLIATALVLAGILTLQLAR >Mature_268_residues MLSALMHASWNAIVKIGGDRLSSMALIDTFCLLVALPFLFLVPLPAPQVWPFLLATVALEVGYKLSLVAAYNRGDFSQAY PLMRGSAPMMVAILLLLAGSERLGPGGYAGIALICCGLVSLVRWRRQSPDLLGFALLAGACLAAGTVIDGTAVKRYGEVF TYIVWLQAMSHIFMPTYAFSRRGNALVTLMRTEWKRAWIGGINRVGSYALMLWAMTMAPVTKLAALRESSVIFAALLGHF LLREPFDRRRLIATALVLAGILTLQLAR
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29205; Mature: 29205
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSALMHASWNAIVKIGGDRLSSMALIDTFCLLVALPFLFLVPLPAPQVWPFLLATVALE CCHHHHHCCCHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH VGYKLSLVAAYNRGDFSQAYPLMRGSAPMMVAILLLLAGSERLGPGGYAGIALICCGLVS HCCEEEEEEEECCCCHHHHCHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH LVRWRRQSPDLLGFALLAGACLAAGTVIDGTAVKRYGEVFTYIVWLQAMSHIFMPTYAFS HHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRGNALVTLMRTEWKRAWIGGINRVGSYALMLWAMTMAPVTKLAALRESSVIFAALLGHF CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLREPFDRRRLIATALVLAGILTLQLAR HHHCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLSALMHASWNAIVKIGGDRLSSMALIDTFCLLVALPFLFLVPLPAPQVWPFLLATVALE CCHHHHHCCCHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH VGYKLSLVAAYNRGDFSQAYPLMRGSAPMMVAILLLLAGSERLGPGGYAGIALICCGLVS HCCEEEEEEEECCCCHHHHCHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH LVRWRRQSPDLLGFALLAGACLAAGTVIDGTAVKRYGEVFTYIVWLQAMSHIFMPTYAFS HHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRGNALVTLMRTEWKRAWIGGINRVGSYALMLWAMTMAPVTKLAALRESSVIFAALLGHF CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLREPFDRRRLIATALVLAGILTLQLAR HHHCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA