| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is 116695376
Identifier: 116695376
GI number: 116695376
Start: 1605175
End: 1606497
Strand: Direct
Name: 116695376
Synonym: H16_B1434
Alternate gene names: NA
Gene position: 1605175-1606497 (Clockwise)
Preceding gene: 116695375
Following gene: 116695388
Centisome position: 55.11
GC content: 66.29
Gene sequence:
>1323_bases ATGAGCCGTTACCAGACACGTTTTCAGGCGCGTGAGCATGCGGGCTCGGAGCTCGCCTGGGCGTTGCGCGCGTATCGGGG AACCGATGCCCTGGTGCTGGCGATTCCGCGCGGCGGCGTGCCGGTCGGGCGTGTTGTGGCCGACGCACTGGGCGCTGACT TCGACCTGGTGATGGCGCGCAGGATCGTTCCTGGCGTAGCACTGGACGACTCTGGCGCGACATGGTGCACGGACGCAATG GACGCAAATGGCGGCGCCGACAGCCAGCGTGATGCCCAGTTCGACCAGCTTCGCAGGCAGCGCGCCGTGTATACGCCGGT CCGCAAGCTGGCGGATCCGGGCGGTCGCGTGGTGATCGTCGTGGATGACGGCCTGGTGAGCGGCGCAACGATGTATGCGG CCCTCGCCAGCCTGCGCAAGCGGCAACCTGCCCGGCTCATATGCGCACTCCCGATCGCCACCCCAGCCGGGCTGGACCGG GTCCGCGCCCTGGCCGACGAAGTCATCTGCCTGGATACTCCGGACCGCATCGAAAACCTCGCGCACTTCTATCATGAGTT CCAGCTGGTCAGCGACGACCGCGTGCGACAGTTGACAGGGATACCGCCAACGCAGCCCCGGACCCGTGCCCGGCCAGGTG CGGTGGCGGGCGTGCCGTCGTTGAGCAAGGCGATGCTGATTCCGTATCAGACCACTCGGCTGCGGGCCATGCTCGAAACG GCCCCGAACCCGGTCGGCGTCGCGGTGATGGTGTATGCCGGTGGCGCGCAACGCCGTGCAGCCCGCAGCAATTACCTGGC ACGCAAGCTGCGCGCGAAAGGATTCGCCACCATGCTCGTAGACCTGCAGCCTGACAGCCGCGTCGACGACGCACCGGAAT CGGAGGTCGATGAGCTGGTGGCAAGACTGGACCAGACCTTGAGCTTCCTGCGTACTGGGACCCCTTGCGCAAGCTTGCCT GTGGGCCTGCTAAGTACCGGCACCGCAGCGGCGGCAGCCTTGCGCTCAGCCGCGTGCGGCGCGACGCAACTCAGCGCCGT GGCCTGTGTTGCGGGGCGGCTGGATCTCGCGGGCAGCGCAACCCTGCGGCAGCTTGAAATCCCTGCCTTGCTGATATGTG CCAGCGGCAATCCGAAAGACATCCAGATCAACAATCTTGCATTCGAGCAGATGCATTGTCCGCGGCAACTGAGGCTCATC CCGACCAGCGGCCGCGGATTTGAAGACCGCAGGGCCCTGGAAGACATCGCGGCACTCACGATAGGCTGGTTCGAGCGGCA CCTTGCGACCCCATCTTGTCCCCGCCTGGGTTACGGCGGATGA
Upstream 100 bases:
>100_bases CTGGAGCAGGCCAACGAAGCACTGGCCGACCTGCGCGAGGGCCGGCTTACCGGCGCCGCCGTCCTGAAAGTCCGTCAATA GATCCCTGGCAGATAGATCG
Downstream 100 bases:
>100_bases CCATGCCTGGCGGTTACGCGGGGCTGCGCCTGATGCGTGCGGCTCAACCCCAAAGACCGCACAACAATCTTGGGGCCAAT AACGGGAGCCCGTCCTTTGA
Product: phosphoribosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 440; Mature: 439
Protein sequence:
>440_residues MSRYQTRFQAREHAGSELAWALRAYRGTDALVLAIPRGGVPVGRVVADALGADFDLVMARRIVPGVALDDSGATWCTDAM DANGGADSQRDAQFDQLRRQRAVYTPVRKLADPGGRVVIVVDDGLVSGATMYAALASLRKRQPARLICALPIATPAGLDR VRALADEVICLDTPDRIENLAHFYHEFQLVSDDRVRQLTGIPPTQPRTRARPGAVAGVPSLSKAMLIPYQTTRLRAMLET APNPVGVAVMVYAGGAQRRAARSNYLARKLRAKGFATMLVDLQPDSRVDDAPESEVDELVARLDQTLSFLRTGTPCASLP VGLLSTGTAAAAALRSAACGATQLSAVACVAGRLDLAGSATLRQLEIPALLICASGNPKDIQINNLAFEQMHCPRQLRLI PTSGRGFEDRRALEDIAALTIGWFERHLATPSCPRLGYGG
Sequences:
>Translated_440_residues MSRYQTRFQAREHAGSELAWALRAYRGTDALVLAIPRGGVPVGRVVADALGADFDLVMARRIVPGVALDDSGATWCTDAM DANGGADSQRDAQFDQLRRQRAVYTPVRKLADPGGRVVIVVDDGLVSGATMYAALASLRKRQPARLICALPIATPAGLDR VRALADEVICLDTPDRIENLAHFYHEFQLVSDDRVRQLTGIPPTQPRTRARPGAVAGVPSLSKAMLIPYQTTRLRAMLET APNPVGVAVMVYAGGAQRRAARSNYLARKLRAKGFATMLVDLQPDSRVDDAPESEVDELVARLDQTLSFLRTGTPCASLP VGLLSTGTAAAAALRSAACGATQLSAVACVAGRLDLAGSATLRQLEIPALLICASGNPKDIQINNLAFEQMHCPRQLRLI PTSGRGFEDRRALEDIAALTIGWFERHLATPSCPRLGYGG >Mature_439_residues SRYQTRFQAREHAGSELAWALRAYRGTDALVLAIPRGGVPVGRVVADALGADFDLVMARRIVPGVALDDSGATWCTDAMD ANGGADSQRDAQFDQLRRQRAVYTPVRKLADPGGRVVIVVDDGLVSGATMYAALASLRKRQPARLICALPIATPAGLDRV RALADEVICLDTPDRIENLAHFYHEFQLVSDDRVRQLTGIPPTQPRTRARPGAVAGVPSLSKAMLIPYQTTRLRAMLETA PNPVGVAVMVYAGGAQRRAARSNYLARKLRAKGFATMLVDLQPDSRVDDAPESEVDELVARLDQTLSFLRTGTPCASLPV GLLSTGTAAAAALRSAACGATQLSAVACVAGRLDLAGSATLRQLEIPALLICASGNPKDIQINNLAFEQMHCPRQLRLIP TSGRGFEDRRALEDIAALTIGWFERHLATPSCPRLGYGG
Specific function: Unknown
COG id: COG1926
COG function: function code R; Predicted phosphoribosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the dienelactone hydrolase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002925 - InterPro: IPR000836 [H]
Pfam domain/function: PF01738 DLH; PF00156 Pribosyltran [H]
EC number: NA
Molecular weight: Translated: 47138; Mature: 47006
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRYQTRFQAREHAGSELAWALRAYRGTDALVLAIPRGGVPVGRVVADALGADFDLVMAR CCCHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCHHHHHHH RIVPGVALDDSGATWCTDAMDANGGADSQRDAQFDQLRRQRAVYTPVRKLADPGGRVVIV HHCCCEEECCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEE VDDGLVSGATMYAALASLRKRQPARLICALPIATPAGLDRVRALADEVICLDTPDRIENL ECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCEEECCCHHHHHHH AHFYHEFQLVSDDRVRQLTGIPPTQPRTRARPGAVAGVPSLSKAMLIPYQTTRLRAMLET HHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHH APNPVGVAVMVYAGGAQRRAARSNYLARKLRAKGFATMLVDLQPDSRVDDAPESEVDELV CCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCHHHHHHHH ARLDQTLSFLRTGTPCASLPVGLLSTGTAAAAALRSAACGATQLSAVACVAGRLDLAGSA HHHHHHHHHHHCCCCHHHCCHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCC TLRQLEIPALLICASGNPKDIQINNLAFEQMHCPRQLRLIPTSGRGFEDRRALEDIAALT HHEEECCCEEEEECCCCCCEEEEECEEHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHH IGWFERHLATPSCPRLGYGG HHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SRYQTRFQAREHAGSELAWALRAYRGTDALVLAIPRGGVPVGRVVADALGADFDLVMAR CCHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCHHHHHHH RIVPGVALDDSGATWCTDAMDANGGADSQRDAQFDQLRRQRAVYTPVRKLADPGGRVVIV HHCCCEEECCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEE VDDGLVSGATMYAALASLRKRQPARLICALPIATPAGLDRVRALADEVICLDTPDRIENL ECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCEEECCCHHHHHHH AHFYHEFQLVSDDRVRQLTGIPPTQPRTRARPGAVAGVPSLSKAMLIPYQTTRLRAMLET HHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHH APNPVGVAVMVYAGGAQRRAARSNYLARKLRAKGFATMLVDLQPDSRVDDAPESEVDELV CCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCHHHHHHHH ARLDQTLSFLRTGTPCASLPVGLLSTGTAAAAALRSAACGATQLSAVACVAGRLDLAGSA HHHHHHHHHHHCCCCHHHCCHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCC TLRQLEIPALLICASGNPKDIQINNLAFEQMHCPRQLRLIPTSGRGFEDRRALEDIAALT HHEEECCCEEEEECCCCCCEEEEECEEHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHH IGWFERHLATPSCPRLGYGG HHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]