| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is adhP [H]
Identifier: 116695375
GI number: 116695375
Start: 1604142
End: 1605155
Strand: Direct
Name: adhP [H]
Synonym: H16_B1433
Alternate gene names: 116695375
Gene position: 1604142-1605155 (Clockwise)
Preceding gene: 116695374
Following gene: 116695376
Centisome position: 55.08
GC content: 67.06
Gene sequence:
>1014_bases ATGCCCCACCAAACCATGCGTGCAATGGTCTTCGAGGGCGCAGGCCTGCCGCTGCGCCTCCACCACTTGCCGGTTGCCGA ACCGGGGCCCGGCGAACTTCGCATTGCCGTGGGAGCTTGCGGGGTGTGCCGGACCGACCTGCATATCGCCGACGGCGACC TGCGCCATCCCAAGCCGGTGCTCATCCCGGGACATGAAATCGTCGGACAGGTGGATTCGTGCGGCGCCGGTGTCACCGTC TTCAAGCCGGGGGACCGCGTCGGTGTGCCCTGGCTCGGACATAGCTGTGGCCATTGTCGCTACTGCCTGCGTCATCACGA GAATCTTTGCGACGCACCGCTGTTCACTGGCTATACCCGCGATGGCGGCTATGCGGAGTACGTTGTTGCCGACAGCGGCT ATTGCTTCCGGATTCCGCCCGGCTACGATGACGAACACGCCGCGCCACTACTCTGCGCGGGCCTGATCGGCTACCGGACG CTGCGCATGGCGGGCGCAGCCAGCCATGCGCAGCGCGTCGGCATCTACGGCTTCGGCGCCGCCGCCCACCTGGTGACGCA GATCGCGGTGGCGCAAGGCCGCGAAGTCTACGCCTTCACCCGCACGGGCGACGCAGGCGCCCAGCAACTCGCCTACCAAT CCGGTGCGTGCTGGGCCGGCTCGAGCGAGCTCGAGTCGCCCGTGCCGCTGGACGCCGCGCTGATTTTCGCCCCGGTGGGC GCGCTGGTGCCCAAGGCGCTGCGCGCCGTGGACAAGGGTGGCATCGTGGTCTGTGGCGGAATTCATATGAGCGATATCCC AAGCATGCCTTACCAGCTGCTTTGGGAAGAAAGGCGCCTGTGTTCCGTAGCCAACCTCACGCGTGCCGACGGCATCGCGC TGATGGATATCGCCGCCCGGACGCCGCTGCATACGCACACCACCGCGTATCCGCTGGAGCAGGCCAACGAAGCACTGGCC GACCTGCGCGAGGGCCGGCTTACCGGCGCCGCCGTCCTGAAAGTCCGTCAATAG
Upstream 100 bases:
>100_bases GTCCGGCGCCTGCTGATGGGCAGCGTGTCGGAAGGCGTGCTTGCCAAGACCAGCAAGCCCGTGCTCCTGGTCCGCAGCGA AGTCGAAGGTTAGGCGCGCC
Downstream 100 bases:
>100_bases ATCCCTGGCAGATAGATCGATGAGCCGTTACCAGACACGTTTTCAGGCGCGTGAGCATGCGGGCTCGGAGCTCGCCTGGG CGTTGCGCGCGTATCGGGGA
Product: alcohol dehydrogenase, Zn-dependent
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MPHQTMRAMVFEGAGLPLRLHHLPVAEPGPGELRIAVGACGVCRTDLHIADGDLRHPKPVLIPGHEIVGQVDSCGAGVTV FKPGDRVGVPWLGHSCGHCRYCLRHHENLCDAPLFTGYTRDGGYAEYVVADSGYCFRIPPGYDDEHAAPLLCAGLIGYRT LRMAGAASHAQRVGIYGFGAAAHLVTQIAVAQGREVYAFTRTGDAGAQQLAYQSGACWAGSSELESPVPLDAALIFAPVG ALVPKALRAVDKGGIVVCGGIHMSDIPSMPYQLLWEERRLCSVANLTRADGIALMDIAARTPLHTHTTAYPLEQANEALA DLREGRLTGAAVLKVRQ
Sequences:
>Translated_337_residues MPHQTMRAMVFEGAGLPLRLHHLPVAEPGPGELRIAVGACGVCRTDLHIADGDLRHPKPVLIPGHEIVGQVDSCGAGVTV FKPGDRVGVPWLGHSCGHCRYCLRHHENLCDAPLFTGYTRDGGYAEYVVADSGYCFRIPPGYDDEHAAPLLCAGLIGYRT LRMAGAASHAQRVGIYGFGAAAHLVTQIAVAQGREVYAFTRTGDAGAQQLAYQSGACWAGSSELESPVPLDAALIFAPVG ALVPKALRAVDKGGIVVCGGIHMSDIPSMPYQLLWEERRLCSVANLTRADGIALMDIAARTPLHTHTTAYPLEQANEALA DLREGRLTGAAVLKVRQ >Mature_336_residues PHQTMRAMVFEGAGLPLRLHHLPVAEPGPGELRIAVGACGVCRTDLHIADGDLRHPKPVLIPGHEIVGQVDSCGAGVTVF KPGDRVGVPWLGHSCGHCRYCLRHHENLCDAPLFTGYTRDGGYAEYVVADSGYCFRIPPGYDDEHAAPLLCAGLIGYRTL RMAGAASHAQRVGIYGFGAAAHLVTQIAVAQGREVYAFTRTGDAGAQQLAYQSGACWAGSSELESPVPLDAALIFAPVGA LVPKALRAVDKGGIVVCGGIHMSDIPSMPYQLLWEERRLCSVANLTRADGIALMDIAARTPLHTHTTAYPLEQANEALAD LREGRLTGAAVLKVRQ
Specific function: Preferred Specificity Is Towards 1-Propanol. [C]
COG id: COG1064
COG function: function code R; Zn-dependent alcohol dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI4501933, Length=184, Percent_Identity=29.8913043478261, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI34577061, Length=194, Percent_Identity=29.3814432989691, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI262073058, Length=193, Percent_Identity=28.4974093264249, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI71743840, Length=193, Percent_Identity=28.4974093264249, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI4501929, Length=194, Percent_Identity=28.8659793814433, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI156627571, Length=347, Percent_Identity=25.6484149855908, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI71565152, Length=104, Percent_Identity=38.4615384615385, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI71565154, Length=105, Percent_Identity=41.9047619047619, Blast_Score=70, Evalue=3e-12, Organism=Escherichia coli, GI87081918, Length=326, Percent_Identity=32.2085889570552, Blast_Score=123, Evalue=2e-29, Organism=Escherichia coli, GI87082401, Length=327, Percent_Identity=29.0519877675841, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI1786518, Length=200, Percent_Identity=37, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1790045, Length=147, Percent_Identity=36.734693877551, Blast_Score=83, Evalue=3e-17, Organism=Escherichia coli, GI1787863, Length=221, Percent_Identity=28.9592760180996, Blast_Score=82, Evalue=6e-17, Organism=Escherichia coli, GI1788407, Length=199, Percent_Identity=32.6633165829146, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI87082125, Length=200, Percent_Identity=29, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1786552, Length=363, Percent_Identity=25.8953168044077, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1788073, Length=133, Percent_Identity=33.0827067669173, Blast_Score=63, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71988145, Length=333, Percent_Identity=28.2282282282282, Blast_Score=117, Evalue=7e-27, Organism=Caenorhabditis elegans, GI17562584, Length=339, Percent_Identity=26.5486725663717, Blast_Score=104, Evalue=6e-23, Organism=Caenorhabditis elegans, GI17562582, Length=165, Percent_Identity=33.3333333333333, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17562878, Length=192, Percent_Identity=29.6875, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI25146526, Length=210, Percent_Identity=31.9047619047619, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17562876, Length=206, Percent_Identity=29.6116504854369, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI71997431, Length=212, Percent_Identity=31.6037735849057, Blast_Score=69, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6323961, Length=162, Percent_Identity=40.1234567901235, Blast_Score=117, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6323729, Length=210, Percent_Identity=36.1904761904762, Blast_Score=117, Evalue=3e-27, Organism=Saccharomyces cerevisiae, GI6324486, Length=254, Percent_Identity=33.4645669291339, Blast_Score=113, Evalue=4e-26, Organism=Saccharomyces cerevisiae, GI6319621, Length=359, Percent_Identity=28.6908077994429, Blast_Score=111, Evalue=1e-25, Organism=Saccharomyces cerevisiae, GI6319949, Length=182, Percent_Identity=35.7142857142857, Blast_Score=85, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6323980, Length=179, Percent_Identity=36.8715083798883, Blast_Score=84, Evalue=5e-17, Organism=Drosophila melanogaster, GI17737897, Length=153, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI17137530, Length=138, Percent_Identity=32.6086956521739, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI17737895, Length=113, Percent_Identity=38.9380530973451, Blast_Score=65, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR002328 - InterPro: IPR014187 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.1.1.1 [H]
Molecular weight: Translated: 35838; Mature: 35706
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: PS00059 ADH_ZINC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHQTMRAMVFEGAGLPLRLHHLPVAEPGPGELRIAVGACGVCRTDLHIADGDLRHPKPV CCCHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEEECCCEEECCCEECCCCCCCCCCE LIPGHEIVGQVDSCGAGVTVFKPGDRVGVPWLGHSCGHCRYCLRHHENLCDAPLFTGYTR EECCHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC DGGYAEYVVADSGYCFRIPPGYDDEHAAPLLCAGLIGYRTLRMAGAASHAQRVGIYGFGA CCCEEEEEEECCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHEECEEECCH AAHLVTQIAVAQGREVYAFTRTGDAGAQQLAYQSGACWAGSSELESPVPLDAALIFAPVG HHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH ALVPKALRAVDKGGIVVCGGIHMSDIPSMPYQLLWEERRLCSVANLTRADGIALMDIAAR HHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEHHHC TPLHTHTTAYPLEQANEALADLREGRLTGAAVLKVRQ CCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECC >Mature Secondary Structure PHQTMRAMVFEGAGLPLRLHHLPVAEPGPGELRIAVGACGVCRTDLHIADGDLRHPKPV CCHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEEECCCEEECCCEECCCCCCCCCCE LIPGHEIVGQVDSCGAGVTVFKPGDRVGVPWLGHSCGHCRYCLRHHENLCDAPLFTGYTR EECCHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC DGGYAEYVVADSGYCFRIPPGYDDEHAAPLLCAGLIGYRTLRMAGAASHAQRVGIYGFGA CCCEEEEEEECCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHEECEEECCH AAHLVTQIAVAQGREVYAFTRTGDAGAQQLAYQSGACWAGSSELESPVPLDAALIFAPVG HHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH ALVPKALRAVDKGGIVVCGGIHMSDIPSMPYQLLWEERRLCSVANLTRADGIALMDIAAR HHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEHHHC TPLHTHTTAYPLEQANEALADLREGRLTGAAVLKVRQ CCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]