| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is 116694323
Identifier: 116694323
GI number: 116694323
Start: 416248
End: 417225
Strand: Direct
Name: 116694323
Synonym: H16_B0369
Alternate gene names: NA
Gene position: 416248-417225 (Clockwise)
Preceding gene: 116694319
Following gene: 116694324
Centisome position: 14.29
GC content: 66.16
Gene sequence:
>978_bases ATGCTCATCAGGTGCAAAAGGGCGCTGCTACCCGTGATGGCAATCATCTGGGGTACCGGCAGCCTTGCGCAAACCTACCC CGACAAGCCTGTCACGCTGATCGTGCCGGCCAGCGCAGGCGGGGTGGTCGACGCTCTGGCCCGTGCCTATGGCGACGAGT TCAGGAAGCTCACGGGGCAGCCCATGGTGGTCGTCAACAAGCCGGGTGCCTCGGCCATGGTGGGGACGCAGATGGCCGCG CGCTCGGCCCCCGATGGCTACACACTGTTGATGACGCAAGCCACGTCCATCCTGAACGGGCCGCTGATGACCAAAAAGAT GCCGTACGACGCGCGGCGCGACCTGGCATTCATCACGCAGGTGGGTACCGGGAACCTCGTCGTGGCCGTAGGCAAGGACG TCCCCGCCCGCAACATGCAGGAGTTCATCGCCTGGGCCAAGGCCAACCGTGGCCAGGTCAACTATGGTTCGTACGGCGTC GGCGGCACCGCGCATCTGGTCTCCGCCTACCTGAGCAGTTCCCGCAACCTGGAGATGTCGCACGTCCCCTATCCGGGCGA AGCGCCGGAGATCCAGGGGCTTGCCGGCGGCGCAGTGCAATGCGCCATTGCTTCGGCCGGCGCGCTGGCGCCCCATCTGG CAAGCGGCAGGGTGCGCGCGCTGGCCGTGATTGCGGACAAGCGCCTGGCAGCCCTGCCGGACGTGCCGACCATGGCCGAA GCGGGTCTGCGCGATCCGGAGTTCCGTCCGCAGTCATGGATCGTGCTGATGGCACCGGCGGGCACGCCGCAGAACGTGCT GGCGTTCGTCGAAAAGACCTCGCGCGACATCATCCATTCGACGCCGATGAAGGCGCGCTTCCAGGCCTACGGCATCGAGC CGGTCGGCAACAGTTCGGCCGAGTTCCGCCATAACTTCGAAGCACTCATGCCTGTCATGGAGCGCCTGATCAAGGTATCC GGCGCCGCGGGGGAATGA
Upstream 100 bases:
>100_bases AGGAATGATCGGCAGCGGGGGTGACCATGGACGCATCGGGCAATCCCGAAGCGGACGGCTGCATGGCCCGGGCCGCAATA TCCCGAAGAGGAGGAGACAC
Downstream 100 bases:
>100_bases GCGCGGCCTGGCGGTCTGGTCCCGTTTTCATGTGAAGTCCGTTTGTCGAGGAGAGTATGTCGCAACGAGAATTTCCATCA GGCATCCGGTCCCTGGATGC
Product: extra-cytoplasmic solute receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MLIRCKRALLPVMAIIWGTGSLAQTYPDKPVTLIVPASAGGVVDALARAYGDEFRKLTGQPMVVVNKPGASAMVGTQMAA RSAPDGYTLLMTQATSILNGPLMTKKMPYDARRDLAFITQVGTGNLVVAVGKDVPARNMQEFIAWAKANRGQVNYGSYGV GGTAHLVSAYLSSSRNLEMSHVPYPGEAPEIQGLAGGAVQCAIASAGALAPHLASGRVRALAVIADKRLAALPDVPTMAE AGLRDPEFRPQSWIVLMAPAGTPQNVLAFVEKTSRDIIHSTPMKARFQAYGIEPVGNSSAEFRHNFEALMPVMERLIKVS GAAGE
Sequences:
>Translated_325_residues MLIRCKRALLPVMAIIWGTGSLAQTYPDKPVTLIVPASAGGVVDALARAYGDEFRKLTGQPMVVVNKPGASAMVGTQMAA RSAPDGYTLLMTQATSILNGPLMTKKMPYDARRDLAFITQVGTGNLVVAVGKDVPARNMQEFIAWAKANRGQVNYGSYGV GGTAHLVSAYLSSSRNLEMSHVPYPGEAPEIQGLAGGAVQCAIASAGALAPHLASGRVRALAVIADKRLAALPDVPTMAE AGLRDPEFRPQSWIVLMAPAGTPQNVLAFVEKTSRDIIHSTPMKARFQAYGIEPVGNSSAEFRHNFEALMPVMERLIKVS GAAGE >Mature_325_residues MLIRCKRALLPVMAIIWGTGSLAQTYPDKPVTLIVPASAGGVVDALARAYGDEFRKLTGQPMVVVNKPGASAMVGTQMAA RSAPDGYTLLMTQATSILNGPLMTKKMPYDARRDLAFITQVGTGNLVVAVGKDVPARNMQEFIAWAKANRGQVNYGSYGV GGTAHLVSAYLSSSRNLEMSHVPYPGEAPEIQGLAGGAVQCAIASAGALAPHLASGRVRALAVIADKRLAALPDVPTMAE AGLRDPEFRPQSWIVLMAPAGTPQNVLAFVEKTSRDIIHSTPMKARFQAYGIEPVGNSSAEFRHNFEALMPVMERLIKVS GAAGE
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34369; Mature: 34369
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIRCKRALLPVMAIIWGTGSLAQTYPDKPVTLIVPASAGGVVDALARAYGDEFRKLTGQ CEEEHHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCC PMVVVNKPGASAMVGTQMAARSAPDGYTLLMTQATSILNGPLMTKKMPYDARRDLAFITQ CEEEEECCCCCHHHHHHHHHCCCCCCEEEEEEHHHHHHCCCCCCCCCCCCHHCCEEEEEE VGTGNLVVAVGKDVPARNMQEFIAWAKANRGQVNYGSYGVGGTAHLVSAYLSSSRNLEMS ECCCCEEEEECCCCCHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHCCCCCEEE HVPYPGEAPEIQGLAGGAVQCAIASAGALAPHLASGRVRALAVIADKRLAALPDVPTMAE ECCCCCCCCCCCCCCCCCEEEEHHHCCCCCHHHCCCCEEEEEEEECCHHHCCCCCCCHHH AGLRDPEFRPQSWIVLMAPAGTPQNVLAFVEKTSRDIIHSTPMKARFQAYGIEPVGNSSA CCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHEEECCCCCCCCCH EFRHNFEALMPVMERLIKVSGAAGE HHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLIRCKRALLPVMAIIWGTGSLAQTYPDKPVTLIVPASAGGVVDALARAYGDEFRKLTGQ CEEEHHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCC PMVVVNKPGASAMVGTQMAARSAPDGYTLLMTQATSILNGPLMTKKMPYDARRDLAFITQ CEEEEECCCCCHHHHHHHHHCCCCCCEEEEEEHHHHHHCCCCCCCCCCCCHHCCEEEEEE VGTGNLVVAVGKDVPARNMQEFIAWAKANRGQVNYGSYGVGGTAHLVSAYLSSSRNLEMS ECCCCEEEEECCCCCHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHCCCCCEEE HVPYPGEAPEIQGLAGGAVQCAIASAGALAPHLASGRVRALAVIADKRLAALPDVPTMAE ECCCCCCCCCCCCCCCCCEEEEHHHCCCCCHHHCCCCEEEEEEEECCHHHCCCCCCCHHH AGLRDPEFRPQSWIVLMAPAGTPQNVLAFVEKTSRDIIHSTPMKARFQAYGIEPVGNSSA CCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHEEECCCCCCCCCH EFRHNFEALMPVMERLIKVSGAAGE HHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12910271; 9524276 [H]