| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is lutP [H]
Identifier: 116691165
GI number: 116691165
Start: 3466564
End: 3468204
Strand: Reverse
Name: lutP [H]
Synonym: Bcen2424_3147
Alternate gene names: 116691165
Gene position: 3468204-3466564 (Counterclockwise)
Preceding gene: 116691167
Following gene: 116691163
Centisome position: 99.55
GC content: 68.43
Gene sequence:
>1641_bases ATGAATCCCACCGACGCCCTACCGCCCGGCATCGTCTTCGCGCAACCGTTGACGCCCGTCGCCAATTCGCTGCTCCTGTC GTTCCTCGTCGCCGCGATTCCGATCGCGGTCGCGCTGATTGCGCTCGGCGTGCTGCGCCGCCCCGCGTGGCAGGCGTCGC TCGCCGGGCTCGTCGCGGGCCTCGCGGTGGCGATCGGCGCGTGGGGGATGCCGGCCGGGCTCGCATTCAACGCGGTCGGC GCCGGCATGGCGCTCGCGGTCGTGCCGGTGATGTGGATCGTCTTCAACGCGCTGCTGCTGTACAACATCGCGGTGAAGTC GGGCCGCTTCGACCAGTTCCGGCAGTGGATGCTCGACAACCTGCCCGACGATCGCCGCCTCGTGCTGCTCGTCGTCGCGT TCTCGTTCGGCTGTCTGCTCGAAGGGATTTCCGGATTCGGCACGCCGGTCGCGATCACGAGCGCGCTGCTGATCGCGCTC GGCTTTCCCGCGCTCGAAGCGCTCACCTATACGCTGCTGTTCAACACGGCGCCGGTCGCGTTCGGCGCGCTCGGCGTGCC GATCACCGTGCTCGGCGCGGTCACGTCGCTGCCGCCCGCGACGCTCGCGCAGATGGTCGGCCGCCAGTTGCCGTTCTTCG CGCTGCTGCTGCCGTTCTACGTGGTCGGCGCGTATGGCGGGCTGCGCTCGATCGCGAAGCTGTGGCCCGCGCTGCTCGTG TCGGGCGGCAGCTTCGCGCTCGCGCAGTTCGTCACGTCGAACTTCCTCGGCTACCAGCTCACCGACGTGCTGTCGTCGCT CACGTCGCTGATCGTGACGATCGGTTTCCTGCAGCTGTGGAAGCCGCAGCCCGATCCGCAATACGCGCTCGCGCGCAGCG TGCCGGCCGCCGCCGGCGCCGCGCGCGCGGGTTTCGGCGGCTGGCTGCCGTGGCTCGTCGTGTCGGTGGTCGTGATCGTG TGGGTGCACGCGAACATCGCGGCGATCGGCGACGTGAAGATCAAGTGGCCGGGCCTGCACAACGCCGTATACGTGTCGCT GTACCACAAGCCGTATGCGGCGATCTGGGATTTCCAGCCGCTCGGCACGGGCACCGCGATCCTCGTGTCGGCAATCATCA CGGCCGCGCTGACGCGCACCGGCCCCGGCGCGTTCGTCGAATGCGTGGTGAAGACGTGGCGGCAGACGTGGATCGCGATC GTCACGGTGATGATGATCGTCGGGCTCGCGTACCTGCTGAACTACTCGGGCATCAGCTATACGCTCGGCACCGGCGTCGC GTCCACCGGTGCGCTGTTCCCGCTGGTGTCGGCATCGCTCGGCTGGATCGCCGTGTTCCTGTCCGGCAGCGACACGTCGG GCAACGCGCTGTTCGGCAACCTGCAGGTCGTCGCCGCCCGGCAGCTCGGCCTCGATCCGGTGCTGATGGCCGCCACCAAC TCGTCGGGCGGCGTGATGGGCAAGATGATCTCGCCGCAGAACATCGCGACGGGCGTGTCGACGACGGACCTGAAAGGGCA GGAGGGTGTCGTGTTCGCACGCACCTTCTGGCACAGCGTGATCCTCACGCTGTTGCTCGGCGTGCTGGTGTTCCTGCAGC AGCACGTGCTGACCTGGATGATTCCGGCGCTGCCGAAGTGA
Upstream 100 bases:
>100_bases TGCGTACGCAAGCGCCTGATCGTGGCCGTGACTGCAGGACATCGCCTTGACCCGAACCCGGCGCATCGAGATGCGAACCC GGGTCGACTCTGGAGACACG
Downstream 100 bases:
>100_bases CGCGCGGCGCGGCGACAGAAGGAAGGCACGAGGGAAGCAACGAGGGAAGGCGCGGGAAAAGCGCCACGTAGTGTGCGGAA GCGGTGAACGCGCGGCGGCT
Product: L-lactate transport
Products: lactate [Cytoplasm]; Proton [Cytoplasm]; glycolate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 546; Mature: 546
Protein sequence:
>546_residues MNPTDALPPGIVFAQPLTPVANSLLLSFLVAAIPIAVALIALGVLRRPAWQASLAGLVAGLAVAIGAWGMPAGLAFNAVG AGMALAVVPVMWIVFNALLLYNIAVKSGRFDQFRQWMLDNLPDDRRLVLLVVAFSFGCLLEGISGFGTPVAITSALLIAL GFPALEALTYTLLFNTAPVAFGALGVPITVLGAVTSLPPATLAQMVGRQLPFFALLLPFYVVGAYGGLRSIAKLWPALLV SGGSFALAQFVTSNFLGYQLTDVLSSLTSLIVTIGFLQLWKPQPDPQYALARSVPAAAGAARAGFGGWLPWLVVSVVVIV WVHANIAAIGDVKIKWPGLHNAVYVSLYHKPYAAIWDFQPLGTGTAILVSAIITAALTRTGPGAFVECVVKTWRQTWIAI VTVMMIVGLAYLLNYSGISYTLGTGVASTGALFPLVSASLGWIAVFLSGSDTSGNALFGNLQVVAARQLGLDPVLMAATN SSGGVMGKMISPQNIATGVSTTDLKGQEGVVFARTFWHSVILTLLLGVLVFLQQHVLTWMIPALPK
Sequences:
>Translated_546_residues MNPTDALPPGIVFAQPLTPVANSLLLSFLVAAIPIAVALIALGVLRRPAWQASLAGLVAGLAVAIGAWGMPAGLAFNAVG AGMALAVVPVMWIVFNALLLYNIAVKSGRFDQFRQWMLDNLPDDRRLVLLVVAFSFGCLLEGISGFGTPVAITSALLIAL GFPALEALTYTLLFNTAPVAFGALGVPITVLGAVTSLPPATLAQMVGRQLPFFALLLPFYVVGAYGGLRSIAKLWPALLV SGGSFALAQFVTSNFLGYQLTDVLSSLTSLIVTIGFLQLWKPQPDPQYALARSVPAAAGAARAGFGGWLPWLVVSVVVIV WVHANIAAIGDVKIKWPGLHNAVYVSLYHKPYAAIWDFQPLGTGTAILVSAIITAALTRTGPGAFVECVVKTWRQTWIAI VTVMMIVGLAYLLNYSGISYTLGTGVASTGALFPLVSASLGWIAVFLSGSDTSGNALFGNLQVVAARQLGLDPVLMAATN SSGGVMGKMISPQNIATGVSTTDLKGQEGVVFARTFWHSVILTLLLGVLVFLQQHVLTWMIPALPK >Mature_546_residues MNPTDALPPGIVFAQPLTPVANSLLLSFLVAAIPIAVALIALGVLRRPAWQASLAGLVAGLAVAIGAWGMPAGLAFNAVG AGMALAVVPVMWIVFNALLLYNIAVKSGRFDQFRQWMLDNLPDDRRLVLLVVAFSFGCLLEGISGFGTPVAITSALLIAL GFPALEALTYTLLFNTAPVAFGALGVPITVLGAVTSLPPATLAQMVGRQLPFFALLLPFYVVGAYGGLRSIAKLWPALLV SGGSFALAQFVTSNFLGYQLTDVLSSLTSLIVTIGFLQLWKPQPDPQYALARSVPAAAGAARAGFGGWLPWLVVSVVVIV WVHANIAAIGDVKIKWPGLHNAVYVSLYHKPYAAIWDFQPLGTGTAILVSAIITAALTRTGPGAFVECVVKTWRQTWIAI VTVMMIVGLAYLLNYSGISYTLGTGVASTGALFPLVSASLGWIAVFLSGSDTSGNALFGNLQVVAARQLGLDPVLMAATN SSGGVMGKMISPQNIATGVSTTDLKGQEGVVFARTFWHSVILTLLLGVLVFLQQHVLTWMIPALPK
Specific function: Is the principal permease for the uptake of L-lactate in B.subtilis [H]
COG id: COG1620
COG function: function code C; L-lactate permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lactate permease family [H]
Homologues:
Organism=Escherichia coli, GI1789347, Length=548, Percent_Identity=39.4160583941606, Blast_Score=350, Evalue=2e-97, Organism=Escherichia coli, GI1790031, Length=548, Percent_Identity=39.5985401459854, Blast_Score=326, Evalue=2e-90,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003804 [H]
Pfam domain/function: PF02652 Lactate_perm [H]
EC number: NA
Molecular weight: Translated: 57289; Mature: 57289
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPTDALPPGIVFAQPLTPVANSLLLSFLVAAIPIAVALIALGVLRRPAWQASLAGLVAG CCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LAVAIGAWGMPAGLAFNAVGAGMALAVVPVMWIVFNALLLYNIAVKSGRFDQFRQWMLDN HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC LPDDRRLVLLVVAFSFGCLLEGISGFGTPVAITSALLIALGFPALEALTYTLLFNTAPVA CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHH FGALGVPITVLGAVTSLPPATLAQMVGRQLPFFALLLPFYVVGAYGGLRSIAKLWPALLV HHHHCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGGSFALAQFVTSNFLGYQLTDVLSSLTSLIVTIGFLQLWKPQPDPQYALARSVPAAAGA CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHCC ARAGFGGWLPWLVVSVVVIVWVHANIAAIGDVKIKWPGLHNAVYVSLYHKPYAAIWDFQP CCCCCCCHHHHHHHHHHHHHHHHCCEEEECCEEEECCCCCCEEEEEEECCCCHHHCCCCC LGTGTAILVSAIITAALTRTGPGAFVECVVKTWRQTWIAIVTVMMIVGLAYLLNYSGISY CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE TLGTGVASTGALFPLVSASLGWIAVFLSGSDTSGNALFGNLQVVAARQLGLDPVLMAATN ECCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCEEEECCEEEEHHHCCCCCEEEEEEC SSGGVMGKMISPQNIATGVSTTDLKGQEGVVFARTFWHSVILTLLLGVLVFLQQHVLTWM CCCCCEEECCCCCHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPALPK HCCCCC >Mature Secondary Structure MNPTDALPPGIVFAQPLTPVANSLLLSFLVAAIPIAVALIALGVLRRPAWQASLAGLVAG CCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LAVAIGAWGMPAGLAFNAVGAGMALAVVPVMWIVFNALLLYNIAVKSGRFDQFRQWMLDN HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC LPDDRRLVLLVVAFSFGCLLEGISGFGTPVAITSALLIALGFPALEALTYTLLFNTAPVA CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHH FGALGVPITVLGAVTSLPPATLAQMVGRQLPFFALLLPFYVVGAYGGLRSIAKLWPALLV HHHHCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGGSFALAQFVTSNFLGYQLTDVLSSLTSLIVTIGFLQLWKPQPDPQYALARSVPAAAGA CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHCC ARAGFGGWLPWLVVSVVVIVWVHANIAAIGDVKIKWPGLHNAVYVSLYHKPYAAIWDFQP CCCCCCCHHHHHHHHHHHHHHHHCCEEEECCEEEECCCCCCEEEEEEECCCCHHHCCCCC LGTGTAILVSAIITAALTRTGPGAFVECVVKTWRQTWIAIVTVMMIVGLAYLLNYSGISY CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE TLGTGVASTGALFPLVSASLGWIAVFLSGSDTSGNALFGNLQVVAARQLGLDPVLMAATN ECCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCEEEECCEEEEHHHCCCCCEEEEEEC SSGGVMGKMISPQNIATGVSTTDLKGQEGVVFARTFWHSVILTLLLGVLVFLQQHVLTWM CCCCCEEECCCCCHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPALPK HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: lactate [Periplasm]; Proton [Periplasm]; glycolate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + lactate [Periplasm] = Proton [Cytoplasm] + lactate [Cytoplasm] Proton [Periplasm] + glycolate [Periplasm] = Proton [Cytoplasm] + glycolate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377; 8969506 [H]