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The map label for this gene is ybeQ [H]

Identifier: 116691133

GI number: 116691133

Start: 3430477

End: 3431229

Strand: Reverse

Name: ybeQ [H]

Synonym: Bcen2424_3115

Alternate gene names: 116691133

Gene position: 3431229-3430477 (Counterclockwise)

Preceding gene: 116691134

Following gene: 116691127

Centisome position: 98.49

GC content: 71.58

Gene sequence:

>753_bases
ATGAACGGCGCAGACGCTGCGTGCCGCGGGCGCGCGCGGATCGGGACGATGGTCGGCCTGTGGGCCGTGTGTGCGGTTGC
CGCCGCGCAGGGCGCGCCGCAAGCGAAGCCCGATCCGTCGCGCGAGACGCAATCGGCGGTTGCCGACTACAACGCCGGCG
ACTATCGCGCGGCGCTGGTGCAGTTCCACGATGCGGCCGAGCGCGGCGATCGCCTCGCGCAGTTCAACTACGCGATGATG
CTGCTGACGGGCGAAGGCGTGACGGCGAACGTCGACGAAGGGCTGCGCTGGCTCAGGCGTGCGGCGGACGCGAACATGTC
GCATGCGCAGTACGTGTACGGCCGGATGTTCGACGATGGCGAATTCGTCGCGCGCAATCCGGCGGAAGCGCATCGCTGGT
TCCTGCGCGCCGCGAAGCAGGGGCACGTGCAGGCCGAGCTGTCGCTCGCGAACCAGTTCCTCGACGGGCGCGGCACGCCG
CGCGACAACCGGCAGGCGTTCGCATGGTACAAGCAGGCCGCCGACGCGGGCGAGCCGACCGCACAGTACGTGACCGCGTC
GTTCTACGAGCGCGGCGGCGACGGCGTCGCGCAGAACCTGAACATCGCGCGGGCGTATTACGCGGCGGCGGCCGCGCAGG
GCGACGAGACGGCCGGGATGAAATTCAAGGAGCTGAGCGCGCGGCTGAAGGCGCCGGGGCCGGCATCGGGCGCCGGCGCG
GAGCAGAGCAAGCCGCACGCGCCGCCGCAGTAG

Upstream 100 bases:

>100_bases
CGCGCCAGTATCGCGACGCCGGTTACCGGATGATCACGGTATCGGCCGACGTGAGCTGGCTATTGCGCGCGACGCGGCAG
GCGTTGCAGGAGGTACGGTC

Downstream 100 bases:

>100_bases
GCGGCCGCATTCGGCGCATCCAATGAAAAACGGCGCCGGGGCGCCGTTTTCGTGTGCCGCGGTGCGGGGCCGCGATCAGC
TCTTCATCAGCCGCCGCTGC

Product: Sel1 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MNGADAACRGRARIGTMVGLWAVCAVAAAQGAPQAKPDPSRETQSAVADYNAGDYRAALVQFHDAAERGDRLAQFNYAMM
LLTGEGVTANVDEGLRWLRRAADANMSHAQYVYGRMFDDGEFVARNPAEAHRWFLRAAKQGHVQAELSLANQFLDGRGTP
RDNRQAFAWYKQAADAGEPTAQYVTASFYERGGDGVAQNLNIARAYYAAAAAQGDETAGMKFKELSARLKAPGPASGAGA
EQSKPHAPPQ

Sequences:

>Translated_250_residues
MNGADAACRGRARIGTMVGLWAVCAVAAAQGAPQAKPDPSRETQSAVADYNAGDYRAALVQFHDAAERGDRLAQFNYAMM
LLTGEGVTANVDEGLRWLRRAADANMSHAQYVYGRMFDDGEFVARNPAEAHRWFLRAAKQGHVQAELSLANQFLDGRGTP
RDNRQAFAWYKQAADAGEPTAQYVTASFYERGGDGVAQNLNIARAYYAAAAAQGDETAGMKFKELSARLKAPGPASGAGA
EQSKPHAPPQ
>Mature_250_residues
MNGADAACRGRARIGTMVGLWAVCAVAAAQGAPQAKPDPSRETQSAVADYNAGDYRAALVQFHDAAERGDRLAQFNYAMM
LLTGEGVTANVDEGLRWLRRAADANMSHAQYVYGRMFDDGEFVARNPAEAHRWFLRAAKQGHVQAELSLANQFLDGRGTP
RDNRQAFAWYKQAADAGEPTAQYVTASFYERGGDGVAQNLNIARAYYAAAAAQGDETAGMKFKELSARLKAPGPASGAGA
EQSKPHAPPQ

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Escherichia coli, GI87081769, Length=165, Percent_Identity=33.3333333333333, Blast_Score=82, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 26799; Mature: 26799

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGADAACRGRARIGTMVGLWAVCAVAAAQGAPQAKPDPSRETQSAVADYNAGDYRAALV
CCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHH
QFHDAAERGDRLAQFNYAMMLLTGEGVTANVDEGLRWLRRAADANMSHAQYVYGRMFDDG
HHHHHHHHCCHHHHHCEEEEEEECCCCEECHHHHHHHHHHHHCCCCCHHHHHHHEECCCC
EFVARNPAEAHRWFLRAAKQGHVQAELSLANQFLDGRGTPRDNRQAFAWYKQAADAGEPT
CEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCH
AQYVTASFYERGGDGVAQNLNIARAYYAAAAAQGDETAGMKFKELSARLKAPGPASGAGA
HHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHCCCCCHHCCHHHHHHHHHCCCCCCCCCCC
EQSKPHAPPQ
CCCCCCCCCC
>Mature Secondary Structure
MNGADAACRGRARIGTMVGLWAVCAVAAAQGAPQAKPDPSRETQSAVADYNAGDYRAALV
CCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHH
QFHDAAERGDRLAQFNYAMMLLTGEGVTANVDEGLRWLRRAADANMSHAQYVYGRMFDDG
HHHHHHHHCCHHHHHCEEEEEEECCCCEECHHHHHHHHHHHHCCCCCHHHHHHHEECCCC
EFVARNPAEAHRWFLRAAKQGHVQAELSLANQFLDGRGTPRDNRQAFAWYKQAADAGEPT
CEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCH
AQYVTASFYERGGDGVAQNLNIARAYYAAAAAQGDETAGMKFKELSARLKAPGPASGAGA
HHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHCCCCCHHCCHHHHHHHHHCCCCCCCCCCC
EQSKPHAPPQ
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]