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The map label for this gene is gatC

Identifier: 116691127

GI number: 116691127

Start: 3423409

End: 3423708

Strand: Reverse

Name: gatC

Synonym: Bcen2424_3109

Alternate gene names: 116691127

Gene position: 3423708-3423409 (Counterclockwise)

Preceding gene: 116691133

Following gene: 116691126

Centisome position: 98.27

GC content: 66.0

Gene sequence:

>300_bases
ATGGCCCTGACCCTGACCGATGTGAAACGCATCGCGCACCTGGCGCGACTCGAAATGGCCGACGCCGACGCCGAGCACAT
GCTCGGCCAGCTCAATGAATTCTTCGGCCTCGTCGAGCAGATGCAGGCGGTCGACACCGCCGGCATCGCGCCGCTCGCCC
ACCCGATCGAACAGATCCAGGAAGTCGCGCAGCGCCTGCGCGACGACGCCGTGACGGAAGTCGTCAATCGCGACGACAAC
CAGCGTCCGGCGCCGGCCGTCCAGGACGGCCTCTATCTCGTGCCGAAGGTGATCGAGTAA

Upstream 100 bases:

>100_bases
CCGCTTCGGCCCCGATTTCTGAGGGTGGATCGCACCCTCCAACCCCCCGCCGCAGTGCTGCTTTCGATGCACTGCGCAGC
CTTGTTTTTCCGGTGATCGC

Downstream 100 bases:

>100_bases
GCATTCGATGACAAGCGCGCCGGCCGTCCTGCGCCGCGCGCCACCCAGAATTCCAGGAAAACCACTCAATGCACGCAAAA
AGCCTGACCGAACTGCGCGC

Product: aspartyl/glutamyl-tRNA amidotransferase subunit C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C

Number of amino acids: Translated: 99; Mature: 98

Protein sequence:

>99_residues
MALTLTDVKRIAHLARLEMADADAEHMLGQLNEFFGLVEQMQAVDTAGIAPLAHPIEQIQEVAQRLRDDAVTEVVNRDDN
QRPAPAVQDGLYLVPKVIE

Sequences:

>Translated_99_residues
MALTLTDVKRIAHLARLEMADADAEHMLGQLNEFFGLVEQMQAVDTAGIAPLAHPIEQIQEVAQRLRDDAVTEVVNRDDN
QRPAPAVQDGLYLVPKVIE
>Mature_98_residues
ALTLTDVKRIAHLARLEMADADAEHMLGQLNEFFGLVEQMQAVDTAGIAPLAHPIEQIQEVAQRLRDDAVTEVVNRDDNQ
RPAPAVQDGLYLVPKVIE

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_BURA4 (B1YPV9)

Other databases:

- EMBL:   CP001025
- RefSeq:   YP_001809739.1
- ProteinModelPortal:   B1YPV9
- SMR:   B1YPV9
- GeneID:   6178588
- GenomeReviews:   CP001025_GR
- KEGG:   bac:BamMC406_3047
- HOGENOM:   HBG586403
- OMA:   SVTPMAM
- ProtClustDB:   PRK00034
- BioCyc:   BAMB398577:BAMMC406_3047-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 10957; Mature: 10825

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALTLTDVKRIAHLARLEMADADAEHMLGQLNEFFGLVEQMQAVDTAGIAPLAHPIEQIQ
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
EVAQRLRDDAVTEVVNRDDNQRPAPAVQDGLYLVPKVIE
HHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHCC
>Mature Secondary Structure 
ALTLTDVKRIAHLARLEMADADAEHMLGQLNEFFGLVEQMQAVDTAGIAPLAHPIEQIQ
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
EVAQRLRDDAVTEVVNRDDNQRPAPAVQDGLYLVPKVIE
HHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA