| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is glpT [C]
Identifier: 116690968
GI number: 116690968
Start: 3262208
End: 3263491
Strand: Direct
Name: glpT [C]
Synonym: Bcen2424_2950
Alternate gene names: 116690968
Gene position: 3262208-3263491 (Clockwise)
Preceding gene: 116690964
Following gene: 116690970
Centisome position: 93.64
GC content: 74.38
Gene sequence:
>1284_bases ATGGATACGTCGTGCATCGCTTCTCCCTCCTCGCCTGCCCGCGACGTGCGCGGGCCCGCCCATCGCTGGCGCGTGCTGGC GGCCGGCGTCGCCGCGAACCTGAGCTTTTCGGCCGCCGCGGCCGGTATTCCGACCACGGCCGTGTGGATGCGCTCGGCCT ATCACCTCGACAACGGCGCGCTCGGCCTCGTGCTCGGCGCGCTCGGCTTCGGCGTCGCGCTGTCCGAGCTGCCGTGGGGA ATCGCCGCCGACCGCTTCGGCGACCGCCGCGTGCTGCTGACCGGGCTCGTCGCGACGGCCGCGATGCTCGCGCTGATGGT GTGCACGATCGTCCCGACCGCGCACGCGGTGCCGCCGCTGATGCGCGTCGTCGCGGCGATGTGCTGCGTCGGCCTGCTCG GCGGCAGCGTGAACGGCTCGAGCGGACGCGCGGTGATGCGCTGGTTCGGCGAGCGCGAACGCGGGCTCGCGATGAGCATC CGCCAGACGGCCGTGCCGCTCGGCGGCGGCCTCGGCGCGGCGCTGCTGCCGTCGCTCGCGTCGCATGCCGGCTTCGCCGC GGTGTTCGGTGCGCTGATGCTGCTGTGCGCGGGATCGGCCGCGCTCACCTGGCGCTGGCTGCACGAGCCGCCCGCCGAGC CGGCCGCGGCGCACCTCGCCCCACACGTCACCGCGCCACACGCGGCCCAACGGCCGCAGGCCGCCAGCCCCGCGCGCAAT CCGCTCGCGAGCGGCCCCGTATGGCGCATCGTGCTCGGCATCGGCCTGTTGTGCGCGCCGCAGTTCGCGGTGCTCACGTT CGCGACGGTGTTCCTGCACGACTTCGGCCGGCTCGGCCTCGCCGGCATCAGCGCGGCGATGGTCGCGCTGCAGCTCGGCG CGATGGTGATGCGCGTCTGGAGCGGCCGCCATACCGACCGGCACGGCAACCGGCGCGCGTACCTGCGCGGCTCCGTGTTC GTCGCGGCCGGGTCGTTCACGCTGCTTGCGGCGGCCACGGCCGGCAGCCCGCATGTGCCGCTCGCCGCGATCGTCGCGAT TCTCGTGTTCGCCGGCATCTGCGTGTCGGCCTGGCACGGCGTCGCGTACACGGAGCTCGCGACGCTCGCCGGCGCGAACC ACGCGGGCACCGCGCTCGGAATGGCGAACACGGTCGTCTACCTCGGGCTGTTCGCGACGCCGCTCGCGATTCCGCCGCTG CTCGCCACGAGTTCGTGGAGCGTGGTGTGGCTCGCGGCGGCGCTGGTCGCGGGCGCGACCTATCCGCTGTTCGCGGCGAA ATAG
Upstream 100 bases:
>100_bases CATCCTGTTTCATCGAACGATTCGTCAAAAACTTTCCGATTTTCAGGATGAATGTAGGCCGCCAGACTGTGGACGTCAAC TTCGAACCGGGCCTACCGTC
Downstream 100 bases:
>100_bases CCGCCGCCCGCTTCACTCGGGCGACGCGGGCGACGCGGGCATCGCGGCAAAGACCCGCGACGCCCGCTCCCCCTCGTCAG GCCGCCTCGCGCGCCAGCGC
Product: major facilitator transporter
Products: Proton [Cytoplasm]; glycerol-3-phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MDTSCIASPSSPARDVRGPAHRWRVLAAGVAANLSFSAAAAGIPTTAVWMRSAYHLDNGALGLVLGALGFGVALSELPWG IAADRFGDRRVLLTGLVATAAMLALMVCTIVPTAHAVPPLMRVVAAMCCVGLLGGSVNGSSGRAVMRWFGERERGLAMSI RQTAVPLGGGLGAALLPSLASHAGFAAVFGALMLLCAGSAALTWRWLHEPPAEPAAAHLAPHVTAPHAAQRPQAASPARN PLASGPVWRIVLGIGLLCAPQFAVLTFATVFLHDFGRLGLAGISAAMVALQLGAMVMRVWSGRHTDRHGNRRAYLRGSVF VAAGSFTLLAAATAGSPHVPLAAIVAILVFAGICVSAWHGVAYTELATLAGANHAGTALGMANTVVYLGLFATPLAIPPL LATSSWSVVWLAAALVAGATYPLFAAK
Sequences:
>Translated_427_residues MDTSCIASPSSPARDVRGPAHRWRVLAAGVAANLSFSAAAAGIPTTAVWMRSAYHLDNGALGLVLGALGFGVALSELPWG IAADRFGDRRVLLTGLVATAAMLALMVCTIVPTAHAVPPLMRVVAAMCCVGLLGGSVNGSSGRAVMRWFGERERGLAMSI RQTAVPLGGGLGAALLPSLASHAGFAAVFGALMLLCAGSAALTWRWLHEPPAEPAAAHLAPHVTAPHAAQRPQAASPARN PLASGPVWRIVLGIGLLCAPQFAVLTFATVFLHDFGRLGLAGISAAMVALQLGAMVMRVWSGRHTDRHGNRRAYLRGSVF VAAGSFTLLAAATAGSPHVPLAAIVAILVFAGICVSAWHGVAYTELATLAGANHAGTALGMANTVVYLGLFATPLAIPPL LATSSWSVVWLAAALVAGATYPLFAAK >Mature_427_residues MDTSCIASPSSPARDVRGPAHRWRVLAAGVAANLSFSAAAAGIPTTAVWMRSAYHLDNGALGLVLGALGFGVALSELPWG IAADRFGDRRVLLTGLVATAAMLALMVCTIVPTAHAVPPLMRVVAAMCCVGLLGGSVNGSSGRAVMRWFGERERGLAMSI RQTAVPLGGGLGAALLPSLASHAGFAAVFGALMLLCAGSAALTWRWLHEPPAEPAAAHLAPHVTAPHAAQRPQAASPARN PLASGPVWRIVLGIGLLCAPQFAVLTFATVFLHDFGRLGLAGISAAMVALQLGAMVMRVWSGRHTDRHGNRRAYLRGSVF VAAGSFTLLAAATAGSPHVPLAAIVAILVFAGICVSAWHGVAYTELATLAGANHAGTALGMANTVVYLGLFATPLAIPPL LATSSWSVVWLAAALVAGATYPLFAAK
Specific function: Responsible For Glycerol-3-Phosphate Uptake. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43618; Mature: 43618
Theoretical pI: Translated: 10.77; Mature: 10.77
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTSCIASPSSPARDVRGPAHRWRVLAAGVAANLSFSAAAAGIPTTAVWMRSAYHLDNGA CCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHCCCCH LGLVLGALGFGVALSELPWGIAADRFGDRRVLLTGLVATAAMLALMVCTIVPTAHAVPPL HHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH MRVVAAMCCVGLLGGSVNGSSGRAVMRWFGERERGLAMSIRQTAVPLGGGLGAALLPSLA HHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH SHAGFAAVFGALMLLCAGSAALTWRWLHEPPAEPAAAHLAPHVTAPHAAQRPQAASPARN HHCCHHHHHHHHHHHHCCCHHEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCC PLASGPVWRIVLGIGLLCAPQFAVLTFATVFLHDFGRLGLAGISAAMVALQLGAMVMRVW CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGRHTDRHGNRRAYLRGSVFVAAGSFTLLAAATAGSPHVPLAAIVAILVFAGICVSAWHG CCCCCCCCCCCEEEEECEEEEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCC VAYTELATLAGANHAGTALGMANTVVYLGLFATPLAIPPLLATSSWSVVWLAAALVAGAT HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHCCC YPLFAAK CCCEECC >Mature Secondary Structure MDTSCIASPSSPARDVRGPAHRWRVLAAGVAANLSFSAAAAGIPTTAVWMRSAYHLDNGA CCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHCCCCH LGLVLGALGFGVALSELPWGIAADRFGDRRVLLTGLVATAAMLALMVCTIVPTAHAVPPL HHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH MRVVAAMCCVGLLGGSVNGSSGRAVMRWFGERERGLAMSIRQTAVPLGGGLGAALLPSLA HHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH SHAGFAAVFGALMLLCAGSAALTWRWLHEPPAEPAAAHLAPHVTAPHAAQRPQAASPARN HHCCHHHHHHHHHHHHCCCHHEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCC PLASGPVWRIVLGIGLLCAPQFAVLTFATVFLHDFGRLGLAGISAAMVALQLGAMVMRVW CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGRHTDRHGNRRAYLRGSVFVAAGSFTLLAAATAGSPHVPLAAIVAILVFAGICVSAWHG CCCCCCCCCCCEEEEECEEEEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCC VAYTELATLAGANHAGTALGMANTVVYLGLFATPLAIPPLLATSSWSVVWLAAALVAGAT HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHCCC YPLFAAK CCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; glycerol-3-phosphate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + glycerol-3-phosphate [Periplasm] = Proton [Cytoplasm] + glycerol-3-phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]