Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is glpT [C]

Identifier: 116690968

GI number: 116690968

Start: 3262208

End: 3263491

Strand: Direct

Name: glpT [C]

Synonym: Bcen2424_2950

Alternate gene names: 116690968

Gene position: 3262208-3263491 (Clockwise)

Preceding gene: 116690964

Following gene: 116690970

Centisome position: 93.64

GC content: 74.38

Gene sequence:

>1284_bases
ATGGATACGTCGTGCATCGCTTCTCCCTCCTCGCCTGCCCGCGACGTGCGCGGGCCCGCCCATCGCTGGCGCGTGCTGGC
GGCCGGCGTCGCCGCGAACCTGAGCTTTTCGGCCGCCGCGGCCGGTATTCCGACCACGGCCGTGTGGATGCGCTCGGCCT
ATCACCTCGACAACGGCGCGCTCGGCCTCGTGCTCGGCGCGCTCGGCTTCGGCGTCGCGCTGTCCGAGCTGCCGTGGGGA
ATCGCCGCCGACCGCTTCGGCGACCGCCGCGTGCTGCTGACCGGGCTCGTCGCGACGGCCGCGATGCTCGCGCTGATGGT
GTGCACGATCGTCCCGACCGCGCACGCGGTGCCGCCGCTGATGCGCGTCGTCGCGGCGATGTGCTGCGTCGGCCTGCTCG
GCGGCAGCGTGAACGGCTCGAGCGGACGCGCGGTGATGCGCTGGTTCGGCGAGCGCGAACGCGGGCTCGCGATGAGCATC
CGCCAGACGGCCGTGCCGCTCGGCGGCGGCCTCGGCGCGGCGCTGCTGCCGTCGCTCGCGTCGCATGCCGGCTTCGCCGC
GGTGTTCGGTGCGCTGATGCTGCTGTGCGCGGGATCGGCCGCGCTCACCTGGCGCTGGCTGCACGAGCCGCCCGCCGAGC
CGGCCGCGGCGCACCTCGCCCCACACGTCACCGCGCCACACGCGGCCCAACGGCCGCAGGCCGCCAGCCCCGCGCGCAAT
CCGCTCGCGAGCGGCCCCGTATGGCGCATCGTGCTCGGCATCGGCCTGTTGTGCGCGCCGCAGTTCGCGGTGCTCACGTT
CGCGACGGTGTTCCTGCACGACTTCGGCCGGCTCGGCCTCGCCGGCATCAGCGCGGCGATGGTCGCGCTGCAGCTCGGCG
CGATGGTGATGCGCGTCTGGAGCGGCCGCCATACCGACCGGCACGGCAACCGGCGCGCGTACCTGCGCGGCTCCGTGTTC
GTCGCGGCCGGGTCGTTCACGCTGCTTGCGGCGGCCACGGCCGGCAGCCCGCATGTGCCGCTCGCCGCGATCGTCGCGAT
TCTCGTGTTCGCCGGCATCTGCGTGTCGGCCTGGCACGGCGTCGCGTACACGGAGCTCGCGACGCTCGCCGGCGCGAACC
ACGCGGGCACCGCGCTCGGAATGGCGAACACGGTCGTCTACCTCGGGCTGTTCGCGACGCCGCTCGCGATTCCGCCGCTG
CTCGCCACGAGTTCGTGGAGCGTGGTGTGGCTCGCGGCGGCGCTGGTCGCGGGCGCGACCTATCCGCTGTTCGCGGCGAA
ATAG

Upstream 100 bases:

>100_bases
CATCCTGTTTCATCGAACGATTCGTCAAAAACTTTCCGATTTTCAGGATGAATGTAGGCCGCCAGACTGTGGACGTCAAC
TTCGAACCGGGCCTACCGTC

Downstream 100 bases:

>100_bases
CCGCCGCCCGCTTCACTCGGGCGACGCGGGCGACGCGGGCATCGCGGCAAAGACCCGCGACGCCCGCTCCCCCTCGTCAG
GCCGCCTCGCGCGCCAGCGC

Product: major facilitator transporter

Products: Proton [Cytoplasm]; glycerol-3-phosphate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MDTSCIASPSSPARDVRGPAHRWRVLAAGVAANLSFSAAAAGIPTTAVWMRSAYHLDNGALGLVLGALGFGVALSELPWG
IAADRFGDRRVLLTGLVATAAMLALMVCTIVPTAHAVPPLMRVVAAMCCVGLLGGSVNGSSGRAVMRWFGERERGLAMSI
RQTAVPLGGGLGAALLPSLASHAGFAAVFGALMLLCAGSAALTWRWLHEPPAEPAAAHLAPHVTAPHAAQRPQAASPARN
PLASGPVWRIVLGIGLLCAPQFAVLTFATVFLHDFGRLGLAGISAAMVALQLGAMVMRVWSGRHTDRHGNRRAYLRGSVF
VAAGSFTLLAAATAGSPHVPLAAIVAILVFAGICVSAWHGVAYTELATLAGANHAGTALGMANTVVYLGLFATPLAIPPL
LATSSWSVVWLAAALVAGATYPLFAAK

Sequences:

>Translated_427_residues
MDTSCIASPSSPARDVRGPAHRWRVLAAGVAANLSFSAAAAGIPTTAVWMRSAYHLDNGALGLVLGALGFGVALSELPWG
IAADRFGDRRVLLTGLVATAAMLALMVCTIVPTAHAVPPLMRVVAAMCCVGLLGGSVNGSSGRAVMRWFGERERGLAMSI
RQTAVPLGGGLGAALLPSLASHAGFAAVFGALMLLCAGSAALTWRWLHEPPAEPAAAHLAPHVTAPHAAQRPQAASPARN
PLASGPVWRIVLGIGLLCAPQFAVLTFATVFLHDFGRLGLAGISAAMVALQLGAMVMRVWSGRHTDRHGNRRAYLRGSVF
VAAGSFTLLAAATAGSPHVPLAAIVAILVFAGICVSAWHGVAYTELATLAGANHAGTALGMANTVVYLGLFATPLAIPPL
LATSSWSVVWLAAALVAGATYPLFAAK
>Mature_427_residues
MDTSCIASPSSPARDVRGPAHRWRVLAAGVAANLSFSAAAAGIPTTAVWMRSAYHLDNGALGLVLGALGFGVALSELPWG
IAADRFGDRRVLLTGLVATAAMLALMVCTIVPTAHAVPPLMRVVAAMCCVGLLGGSVNGSSGRAVMRWFGERERGLAMSI
RQTAVPLGGGLGAALLPSLASHAGFAAVFGALMLLCAGSAALTWRWLHEPPAEPAAAHLAPHVTAPHAAQRPQAASPARN
PLASGPVWRIVLGIGLLCAPQFAVLTFATVFLHDFGRLGLAGISAAMVALQLGAMVMRVWSGRHTDRHGNRRAYLRGSVF
VAAGSFTLLAAATAGSPHVPLAAIVAILVFAGICVSAWHGVAYTELATLAGANHAGTALGMANTVVYLGLFATPLAIPPL
LATSSWSVVWLAAALVAGATYPLFAAK

Specific function: Responsible For Glycerol-3-Phosphate Uptake. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43618; Mature: 43618

Theoretical pI: Translated: 10.77; Mature: 10.77

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTSCIASPSSPARDVRGPAHRWRVLAAGVAANLSFSAAAAGIPTTAVWMRSAYHLDNGA
CCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHCCCCH
LGLVLGALGFGVALSELPWGIAADRFGDRRVLLTGLVATAAMLALMVCTIVPTAHAVPPL
HHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
MRVVAAMCCVGLLGGSVNGSSGRAVMRWFGERERGLAMSIRQTAVPLGGGLGAALLPSLA
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH
SHAGFAAVFGALMLLCAGSAALTWRWLHEPPAEPAAAHLAPHVTAPHAAQRPQAASPARN
HHCCHHHHHHHHHHHHCCCHHEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCC
PLASGPVWRIVLGIGLLCAPQFAVLTFATVFLHDFGRLGLAGISAAMVALQLGAMVMRVW
CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGRHTDRHGNRRAYLRGSVFVAAGSFTLLAAATAGSPHVPLAAIVAILVFAGICVSAWHG
CCCCCCCCCCCEEEEECEEEEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCC
VAYTELATLAGANHAGTALGMANTVVYLGLFATPLAIPPLLATSSWSVVWLAAALVAGAT
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHCCC
YPLFAAK
CCCEECC
>Mature Secondary Structure
MDTSCIASPSSPARDVRGPAHRWRVLAAGVAANLSFSAAAAGIPTTAVWMRSAYHLDNGA
CCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHCCCCH
LGLVLGALGFGVALSELPWGIAADRFGDRRVLLTGLVATAAMLALMVCTIVPTAHAVPPL
HHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
MRVVAAMCCVGLLGGSVNGSSGRAVMRWFGERERGLAMSIRQTAVPLGGGLGAALLPSLA
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH
SHAGFAAVFGALMLLCAGSAALTWRWLHEPPAEPAAAHLAPHVTAPHAAQRPQAASPARN
HHCCHHHHHHHHHHHHCCCHHEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCC
PLASGPVWRIVLGIGLLCAPQFAVLTFATVFLHDFGRLGLAGISAAMVALQLGAMVMRVW
CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGRHTDRHGNRRAYLRGSVFVAAGSFTLLAAATAGSPHVPLAAIVAILVFAGICVSAWHG
CCCCCCCCCCCEEEEECEEEEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCC
VAYTELATLAGANHAGTALGMANTVVYLGLFATPLAIPPLLATSSWSVVWLAAALVAGAT
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHCCC
YPLFAAK
CCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; glycerol-3-phosphate [Periplasm] [C]

Specific reaction: Proton [Periplasm] + glycerol-3-phosphate [Periplasm] = Proton [Cytoplasm] + glycerol-3-phosphate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]