| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
Click here to switch to the map view.
The map label for this gene is can [H]
Identifier: 116690945
GI number: 116690945
Start: 3236200
End: 3236967
Strand: Direct
Name: can [H]
Synonym: Bcen2424_2927
Alternate gene names: 116690945
Gene position: 3236200-3236967 (Clockwise)
Preceding gene: 116690944
Following gene: 116690946
Centisome position: 92.89
GC content: 66.15
Gene sequence:
>768_bases ATGACTACCCAAGACAATCCGCTTTCACATCTGTTCGACAACAACGATGCCTGGGTCAAGCGCCAGCTCGCCGACGATCC CGATTTCTTCGCACGGCTCGCCGACCAGCAGGCGCCGGAATATCTGTGGATCGGCTGCTCGGATTCGCGCGTGCCGGCGA ACCAGATCATCGGCCTGCCGCCGGGTGAAGTGTTCGTGCACCGCAACATCGCGAACGTGGTCGTGCACAGCGACCTGAAC TGCCTGTCGGTGATCCAGTTCGCGGTCGACATCCTGCGCGTGAAGCACATCATGGTCGTCGGCCACTACGGCTGCTCGGG CGTGAACGCGGCGCTGCATAACCGCCGCGTCGGCCTCGCGGACAATTGGCTGCATCACGTGCAGGACGTGCGCGAGCGCC ATGCGGCGCTGCTCGACGAATGGCCGGTCGGCGAAGCGCGTTACCGTCGCCTGATCGAGCTGAATTCGATCGAACAGGTC GTCAACGTGTGCCGCACGACGATCGTCAACGACGCGTGGGCGCGCGGCCAGTCGCTGACCGTGCACGGGCTCGTGTACGG CGTGCACGACGGCCGGATGCGCAACCTCGGGATGTCCGTGTCGAACTTCGATGCGCTCGACGCAACCTACAAGCGCTGCG TGGCGGCGCTGACGGCACGCGGCCAGCATGCGCCCGACAACGACATGGTCGCGGCGGACGCCGCGCAGCTCGACGGCGTC GCGCAGGCGGTCGCCGCCACGCTGAAGCCGTGCGACGACGCGCAGTAA
Upstream 100 bases:
>100_bases GGGCGAGAACGACGGCGCAGGCGACGCGCAGCGCGCCGCCTGACGCCGGCCACACCCCGATCCGATATCGACTTGATTTC CGCCAACGGAATCCACACCG
Downstream 100 bases:
>100_bases CGTGCGGTGACGCGCTAGCTGCCCGGCGGCGGCTGCCGCGCGGGCGCGGCACGCGTCGAACGGATCTGACACCGGCACCG CCACGGCGGCGCCAACCCAA
Product: carbonate dehydratase
Products: NA
Alternate protein names: Carbonate dehydratase 2 [H]
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MTTQDNPLSHLFDNNDAWVKRQLADDPDFFARLADQQAPEYLWIGCSDSRVPANQIIGLPPGEVFVHRNIANVVVHSDLN CLSVIQFAVDILRVKHIMVVGHYGCSGVNAALHNRRVGLADNWLHHVQDVRERHAALLDEWPVGEARYRRLIELNSIEQV VNVCRTTIVNDAWARGQSLTVHGLVYGVHDGRMRNLGMSVSNFDALDATYKRCVAALTARGQHAPDNDMVAADAAQLDGV AQAVAATLKPCDDAQ
Sequences:
>Translated_255_residues MTTQDNPLSHLFDNNDAWVKRQLADDPDFFARLADQQAPEYLWIGCSDSRVPANQIIGLPPGEVFVHRNIANVVVHSDLN CLSVIQFAVDILRVKHIMVVGHYGCSGVNAALHNRRVGLADNWLHHVQDVRERHAALLDEWPVGEARYRRLIELNSIEQV VNVCRTTIVNDAWARGQSLTVHGLVYGVHDGRMRNLGMSVSNFDALDATYKRCVAALTARGQHAPDNDMVAADAAQLDGV AQAVAATLKPCDDAQ >Mature_254_residues TTQDNPLSHLFDNNDAWVKRQLADDPDFFARLADQQAPEYLWIGCSDSRVPANQIIGLPPGEVFVHRNIANVVVHSDLNC LSVIQFAVDILRVKHIMVVGHYGCSGVNAALHNRRVGLADNWLHHVQDVRERHAALLDEWPVGEARYRRLIELNSIEQVV NVCRTTIVNDAWARGQSLTVHGLVYGVHDGRMRNLGMSVSNFDALDATYKRCVAALTARGQHAPDNDMVAADAAQLDGVA QAVAATLKPCDDAQ
Specific function: Unknown
COG id: COG0288
COG function: function code P; Carbonic anhydrase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the beta-class carbonic anhydrase family [H]
Homologues:
Organism=Escherichia coli, GI1786318, Length=210, Percent_Identity=50.9523809523809, Blast_Score=241, Evalue=5e-65, Organism=Escherichia coli, GI1786534, Length=212, Percent_Identity=27.3584905660377, Blast_Score=70, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6324292, Length=191, Percent_Identity=28.7958115183246, Blast_Score=86, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001765 - InterPro: IPR015892 [H]
Pfam domain/function: PF00484 Pro_CA [H]
EC number: =4.2.1.1 [H]
Molecular weight: Translated: 28157; Mature: 28026
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: PS00704 PROK_CO2_ANHYDRASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQDNPLSHLFDNNDAWVKRQLADDPDFFARLADQQAPEYLWIGCSDSRVPANQIIGLP CCCCCCCHHHHHCCCCHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCCCCCCHHHEECCC PGEVFVHRNIANVVVHSDLNCLSVIQFAVDILRVKHIMVVGHYGCSGVNAALHNRRVGLA CCCEEEECCHHHEEEECCCHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHCCCCCCH DNWLHHVQDVRERHAALLDEWPVGEARYRRLIELNSIEQVVNVCRTTIVNDAWARGQSLT HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE VHGLVYGVHDGRMRNLGMSVSNFDALDATYKRCVAALTARGQHAPDNDMVAADAAQLDGV EEEEEEECCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHH AQAVAATLKPCDDAQ HHHHHHHHCCCCCCC >Mature Secondary Structure TTQDNPLSHLFDNNDAWVKRQLADDPDFFARLADQQAPEYLWIGCSDSRVPANQIIGLP CCCCCCHHHHHCCCCHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCCCCCCHHHEECCC PGEVFVHRNIANVVVHSDLNCLSVIQFAVDILRVKHIMVVGHYGCSGVNAALHNRRVGLA CCCEEEECCHHHEEEECCCHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHCCCCCCH DNWLHHVQDVRERHAALLDEWPVGEARYRRLIELNSIEQVVNVCRTTIVNDAWARGQSLT HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE VHGLVYGVHDGRMRNLGMSVSNFDALDATYKRCVAALTARGQHAPDNDMVAADAAQLDGV EEEEEEECCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHH AQAVAATLKPCDDAQ HHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8202364; 9278503; 10493123 [H]