| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is aceK [H]
Identifier: 116690944
GI number: 116690944
Start: 3234325
End: 3236142
Strand: Direct
Name: aceK [H]
Synonym: Bcen2424_2926
Alternate gene names: 116690944
Gene position: 3234325-3236142 (Clockwise)
Preceding gene: 116690942
Following gene: 116690945
Centisome position: 92.84
GC content: 63.2
Gene sequence:
>1818_bases ATGAATCACTTCCCCAAACTGCTGTCGTCGCAGATCGGTTTCGACGTCGCGCAGACGATGCTCGAATACTTCGATCGCCA TTACCGGATCTTCCGCGAAGCGGCGGTCGATGCGAAGACGCTGTTCGAGCGCGGCGACTGGCACGGGCTGCAGCGGCTCG CGCGCGAGCGGATCACGTCGTACGACGAGCGCGTGAAGGAATGCGTCGAGGTGCTGGAAGACGAATACGACGCGGAGAAC ATCGACGACGAAGTGTGGCAGCAGATCAAGCTGCACTATATCGGCCTGCTCACGTCGCACCGCCAGCCCGAGTGCGCGGA AACCTTCTTCAATTCGGTGTGCTGCAAGATCCTGCACCGCTCGTATTTCAGCAACGATTTCATCTTCGTGCGCCCGGCGA TCTCGACCGAGTATCTGGAGAACGACGAACCGGCCGCGAAACCGACCTACCGCGCGTACTATCCGGGCACCGACGGGCTC GCGGTCACGCTCGAGCGCATCGTCACGAACTTCCAGCTCGACCCGCCGTTCGAGGATCTCACGCGCGACATCGGCTGCGT GATGCAGGCGATCGACGACGAATTCGGCCACTTCGACGAAGCGCCGAATTTCCAGATCCACGTGCTGTCGTCGCTGTTCT TCCGCAACAAGAGCGCGTACATCGTCGGCCGCATCATCAACGCCGACCGCGTGCTGCCGTTCGCGGTGCCGATCCGCCAC GTGCGTCCCGGCGTGCTCGCGCTCGACACCGTGCTGCTGCGCCGCGACCTGCTGCAGATCATCTTCAGCTTCTCGCATTC GTACTTCCTCGTCGACATGGGCGTGCCGTCCGCGTACGTGGATTTCCTCTGCACGATCATGCCGGGCAAGCCGAAGGCCG AGATCTACACGTCGGTCGGGCTGCAGAAGCAGGGCAAGAACCTGTTCTACCGCGACCTCCTGCACCATCTGTCGCATTCG AGCGACCGCTTCATCATCGCGCCCGGGATCAAGGGCCTCGTGATGCTCGTGTTCACGCTGCCGTCGTTCCCGTACGTGTT CAAGATCATCAAGGACCACTTCCCGCCGCCGAAGGAAACGACGCGCGCGCAGATCATGGAGAAGTACCAGCTCGTGAAGC GCCACGACCGGCTCGGTCGGATGGCCGACACGCTCGAGTATTCGAGCGTCGCGCTGCCGCTCGCGCGGCTCGATCACGCG CTCGTGCGCGAACTCGAGAAGGAAGTGCCGTCGCTGCTCGAATACGAGGACGACAAGCTCGTGATCAAGCACCTGTACAT CGAGCGCCGGATGACGCCGCTGAACCTGTACCTGCAGAACGGCAGCGACGCGGACGTCGAGCACGGCGTGAAGGAATACG GCAACGCGGTGAAGGAGCTGATGAAGGCGAACATCTTCCCCGGCGACATGCTGTACAAGAACTTCGGCGTCACGCGCCAC GGCCGCGTCGTGTTCTACGACTACGACGAGATCGAATACCTGACCGACTGCAACGTGCGGCGCGTGCCGCCGCCGCGCAA CGAGGAAGACGAGCTGTCCGGCGAACCGTGGTATACCGTCGGCCCGCACGACATCTTTCCGGAGACCTACGGGCCGTTCC TGCTCGGCGACCCGCGCGTGCGCAGCGTCTTCATGAAGCATCACGCGGACTTTTTCGATCCCGCGCTGTGGCAGGCGAGC AAGGACAAGCTGATGCAGGGCGAACTGCCCGATTTTTATCCGTACGACGCGACCCTGCGCTTTAGCGTGCGCTACCCCGC GCGCTTCGGCGCGACGGGCGAGAACGACGGCGCAGGCGACGCGCAGCGCGCCGCCTGA
Upstream 100 bases:
>100_bases GATTGACGACTGTTCGCGCGTCACCTCGAAAGTCATTGAAACGCCGACTTGGGCGCTAAAATGGCGGGTGCTTACAGCCC CTTGAACGAGCCTGCACGCG
Downstream 100 bases:
>100_bases CGCCGGCCACACCCCGATCCGATATCGACTTGATTTCCGCCAACGGAATCCACACCGATGACTACCCAAGACAATCCGCT TTCACATCTGTTCGACAACA
Product: bifunctional isocitrate dehydrogenase kinase/phosphatase protein
Products: NA
Alternate protein names: IDH kinase/phosphatase; IDHK/P [H]
Number of amino acids: Translated: 605; Mature: 605
Protein sequence:
>605_residues MNHFPKLLSSQIGFDVAQTMLEYFDRHYRIFREAAVDAKTLFERGDWHGLQRLARERITSYDERVKECVEVLEDEYDAEN IDDEVWQQIKLHYIGLLTSHRQPECAETFFNSVCCKILHRSYFSNDFIFVRPAISTEYLENDEPAAKPTYRAYYPGTDGL AVTLERIVTNFQLDPPFEDLTRDIGCVMQAIDDEFGHFDEAPNFQIHVLSSLFFRNKSAYIVGRIINADRVLPFAVPIRH VRPGVLALDTVLLRRDLLQIIFSFSHSYFLVDMGVPSAYVDFLCTIMPGKPKAEIYTSVGLQKQGKNLFYRDLLHHLSHS SDRFIIAPGIKGLVMLVFTLPSFPYVFKIIKDHFPPPKETTRAQIMEKYQLVKRHDRLGRMADTLEYSSVALPLARLDHA LVRELEKEVPSLLEYEDDKLVIKHLYIERRMTPLNLYLQNGSDADVEHGVKEYGNAVKELMKANIFPGDMLYKNFGVTRH GRVVFYDYDEIEYLTDCNVRRVPPPRNEEDELSGEPWYTVGPHDIFPETYGPFLLGDPRVRSVFMKHHADFFDPALWQAS KDKLMQGELPDFYPYDATLRFSVRYPARFGATGENDGAGDAQRAA
Sequences:
>Translated_605_residues MNHFPKLLSSQIGFDVAQTMLEYFDRHYRIFREAAVDAKTLFERGDWHGLQRLARERITSYDERVKECVEVLEDEYDAEN IDDEVWQQIKLHYIGLLTSHRQPECAETFFNSVCCKILHRSYFSNDFIFVRPAISTEYLENDEPAAKPTYRAYYPGTDGL AVTLERIVTNFQLDPPFEDLTRDIGCVMQAIDDEFGHFDEAPNFQIHVLSSLFFRNKSAYIVGRIINADRVLPFAVPIRH VRPGVLALDTVLLRRDLLQIIFSFSHSYFLVDMGVPSAYVDFLCTIMPGKPKAEIYTSVGLQKQGKNLFYRDLLHHLSHS SDRFIIAPGIKGLVMLVFTLPSFPYVFKIIKDHFPPPKETTRAQIMEKYQLVKRHDRLGRMADTLEYSSVALPLARLDHA LVRELEKEVPSLLEYEDDKLVIKHLYIERRMTPLNLYLQNGSDADVEHGVKEYGNAVKELMKANIFPGDMLYKNFGVTRH GRVVFYDYDEIEYLTDCNVRRVPPPRNEEDELSGEPWYTVGPHDIFPETYGPFLLGDPRVRSVFMKHHADFFDPALWQAS KDKLMQGELPDFYPYDATLRFSVRYPARFGATGENDGAGDAQRAA >Mature_605_residues MNHFPKLLSSQIGFDVAQTMLEYFDRHYRIFREAAVDAKTLFERGDWHGLQRLARERITSYDERVKECVEVLEDEYDAEN IDDEVWQQIKLHYIGLLTSHRQPECAETFFNSVCCKILHRSYFSNDFIFVRPAISTEYLENDEPAAKPTYRAYYPGTDGL AVTLERIVTNFQLDPPFEDLTRDIGCVMQAIDDEFGHFDEAPNFQIHVLSSLFFRNKSAYIVGRIINADRVLPFAVPIRH VRPGVLALDTVLLRRDLLQIIFSFSHSYFLVDMGVPSAYVDFLCTIMPGKPKAEIYTSVGLQKQGKNLFYRDLLHHLSHS SDRFIIAPGIKGLVMLVFTLPSFPYVFKIIKDHFPPPKETTRAQIMEKYQLVKRHDRLGRMADTLEYSSVALPLARLDHA LVRELEKEVPSLLEYEDDKLVIKHLYIERRMTPLNLYLQNGSDADVEHGVKEYGNAVKELMKANIFPGDMLYKNFGVTRH GRVVFYDYDEIEYLTDCNVRRVPPPRNEEDELSGEPWYTVGPHDIFPETYGPFLLGDPRVRSVFMKHHADFFDPALWQAS KDKLMQGELPDFYPYDATLRFSVRYPARFGATGENDGAGDAQRAA
Specific function: Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source
COG id: COG4579
COG function: function code T; Isocitrate dehydrogenase kinase/phosphatase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AceK family [H]
Homologues:
Organism=Escherichia coli, GI1790446, Length=570, Percent_Identity=41.4035087719298, Blast_Score=456, Evalue=1e-129,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010452 - ProDom: PD043552 [H]
Pfam domain/function: PF06315 AceK [H]
EC number: =2.7.11.5 [H]
Molecular weight: Translated: 69950; Mature: 69950
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHFPKLLSSQIGFDVAQTMLEYFDRHYRIFREAAVDAKTLFERGDWHGLQRLARERITS CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH YDERVKECVEVLEDEYDAENIDDEVWQQIKLHYIGLLTSHRQPECAETFFNSVCCKILHR HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH SYFSNDFIFVRPAISTEYLENDEPAAKPTYRAYYPGTDGLAVTLERIVTNFQLDPPFEDL HHCCCCEEEEECCCCHHHHCCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCCCCHHHH TRDIGCVMQAIDDEFGHFDEAPNFQIHVLSSLFFRNKSAYIVGRIINADRVLPFAVPIRH HHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHH VRPGVLALDTVLLRRDLLQIIFSFSHSYFLVDMGVPSAYVDFLCTIMPGKPKAEIYTSVG CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHCC LQKQGKNLFYRDLLHHLSHSSDRFIIAPGIKGLVMLVFTLPSFPYVFKIIKDHFPPPKET CHHCCCCHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHH TRAQIMEKYQLVKRHDRLGRMADTLEYSSVALPLARLDHALVRELEKEVPSLLEYEDDKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH VIKHLYIERRMTPLNLYLQNGSDADVEHGVKEYGNAVKELMKANIFPGDMLYKNFGVTRH HHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCC GRVVFYDYDEIEYLTDCNVRRVPPPRNEEDELSGEPWYTVGPHDIFPETYGPFLLGDPRV CEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCHHCCCCCCCCCEECCHHH RSVFMKHHADFFDPALWQASKDKLMQGELPDFYPYDATLRFSVRYPARFGATGENDGAGD HHHHHHHCCCCCCHHHHHCCHHHHHCCCCCCCCCCCCEEEEEEECCHHCCCCCCCCCCCC AQRAA HHCCC >Mature Secondary Structure MNHFPKLLSSQIGFDVAQTMLEYFDRHYRIFREAAVDAKTLFERGDWHGLQRLARERITS CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH YDERVKECVEVLEDEYDAENIDDEVWQQIKLHYIGLLTSHRQPECAETFFNSVCCKILHR HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH SYFSNDFIFVRPAISTEYLENDEPAAKPTYRAYYPGTDGLAVTLERIVTNFQLDPPFEDL HHCCCCEEEEECCCCHHHHCCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCCCCHHHH TRDIGCVMQAIDDEFGHFDEAPNFQIHVLSSLFFRNKSAYIVGRIINADRVLPFAVPIRH HHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHH VRPGVLALDTVLLRRDLLQIIFSFSHSYFLVDMGVPSAYVDFLCTIMPGKPKAEIYTSVG CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHCC LQKQGKNLFYRDLLHHLSHSSDRFIIAPGIKGLVMLVFTLPSFPYVFKIIKDHFPPPKET CHHCCCCHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHH TRAQIMEKYQLVKRHDRLGRMADTLEYSSVALPLARLDHALVRELEKEVPSLLEYEDDKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH VIKHLYIERRMTPLNLYLQNGSDADVEHGVKEYGNAVKELMKANIFPGDMLYKNFGVTRH HHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCC GRVVFYDYDEIEYLTDCNVRRVPPPRNEEDELSGEPWYTVGPHDIFPETYGPFLLGDPRV CEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCHHCCCCCCCCCEECCHHH RSVFMKHHADFFDPALWQASKDKLMQGELPDFYPYDATLRFSVRYPARFGATGENDGAGD HHHHHHHCCCCCCHHHHHCCHHHHHCCCCCCCCCCCCEEEEEEECCHHCCCCCCCCCCCC AQRAA HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA