Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is argS [H]

Identifier: 116690937

GI number: 116690937

Start: 3224726

End: 3226507

Strand: Direct

Name: argS [H]

Synonym: Bcen2424_2919

Alternate gene names: 116690937

Gene position: 3224726-3226507 (Clockwise)

Preceding gene: 116690935

Following gene: 116690938

Centisome position: 92.56

GC content: 67.68

Gene sequence:

>1782_bases
ATGCTGCCAGCACACAAACAGACCCTCGAAGCCCTGCTCGCGGATAGCGTCAAGCAGGTCGCACACGCGCTGAAAGGCGC
CGACGCAGCATTCGTCGCCCCCGCCATCACGCTGGAGCGCCCCAAGGTCGCCGCGCACGGCGACGTCGCGTGCAACGTCG
CGATGCAGCTCGCGAAGCCGCTCGGCACGAATCCGCGCCAGCTCGCCGAGCAGATCGTCGCCGCCCTCACCGCGCAGCCG
GCCGCGCAAGGCCTCGTCGAAGCCGCCGAGATCGCCGGGCCCGGCTTCATCAACCTGCGCCTGTCGGCCGCCGCGAAACA
GGCGGTAATCGCCGCCGTGTTCGAGCAGGGCCGCGCGTTCGGCACGTCGGATCGCGAGAAAGGCAAGCAAGTGTTGCTGG
AATTCGTGTCGGCCAACCCGACCGGCCCGCTGCACGTCGGTCACGGCCGTCAGGCCGCGCTCGGCGACGTGCTCGCGAAC
GTGATCGCGAGCCAGGGCTACGCGGTGCACCGCGAGTTCTACTACAACGACGCGGGCGTGCAGATCGGCAACCTGGCGAT
CTCGACGCAGGCGCGCGCGCGCGGCCTGAAGCCGGGCGACGCCGGCTGGCCGGAAGCCGCGTACAACGGTGAGTACATCG
CCGACATCGCGCGCGACTACCTGAACGGCGAAACGGTCGCCGCGTCGGACGGCGAGCCGGTCAAGGGCACGGGCGACGTC
GAGGATCTCGACGCGATCCGCAAGTTCGCGGTCACCTACCTGCGTCGCGAGCAGGACATGGACCTGCAGGCGTTCGGCGT
GAAGTTCGACCAGTACTACCTCGAGTCGTCGCTGTACAGCGAAGGCCGCGTCGAGAAGACGGTCGACGCGCTGGTCAAGG
CCGGCATGACCTACGAGCAGGACGGCGCGCTGTGGCTGCGCACGACCGACGAAGGCGACGACAAGGATCGCGTGATGCGC
AAGTCGGACGGCACGTACACATACTTCGTGCCGGACGTCGCGTACCACGTGACGAAGTGGGAGCGCGGCTTCACGAAGGT
GATCAACATCCAGGGTTCGGACCACCACGGCACGATCGCGCGCGTGCGCGCCGGCCTGCAGGGGCTGCATATCGGCATTC
CGAAGGGCTATCCCGACTACGTGCTGCACAAGATGGTCACCGTGATGCGCGACGGCCAGGAAGTGAAGATCTCGAAGCGC
GCGGGCAGCTACGTGACGGTGCGCGACCTGATCGAATGGTCGGGCGGCGCGGCGGCGGGCCAGGAAGCGGCCCCCGACCT
GATCGACGAGGCAACCATCACGCGCGGCCGCGACGCGGTGCGTTTCTTCCTGATCTCGCGCAAGGCCGATACGGAGTTCG
TGTTCGACATCGACCTCGCGCTGAAACAGAACGACGAAAACCCGGTCTATTACGTCCAGTACGCGCATGCGCGGATCTGC
TCGGTGCTCAACGAACTGAAGTCGCGCTACAACGTCGACGTCGCGCAACTGCCGGGCGCCGACCTGTCGCAGCTGACGAG
CGCGCAAGCGGCGTCGCTGATGCAGAAGCTGGCCGAGTATCCGGACATGCTCACGCACGCGGCGAACGAGCTGGCGCCGC
ACGCGGTCGCGTTCTACCTGCGCGATCTCGCTGGCGAATTCCACTCGTTCTACAATGCGGAGCGCGTGCTGGTCGACGAC
GAGGCGCCGCGCAATGCGCGCGCCGCGCTGCTCGCCGCGACCCGGCAGGTGCTCGAGAACGGCCTGGCGGTGCTCGGCGT
ATCCGCGCCCGCCAAGATGTAA

Upstream 100 bases:

>100_bases
TTAGCACCTGTTAAAATTCTGCGATCCCTGAAACGCGCGCTTAAAAAGCGTGCCGGCGGGCCGGCGTTTCCGGCCGCCAC
CAACGAAGCCTTCTACCAGC

Downstream 100 bases:

>100_bases
GGATGCAAGCGGCCCGGAACCGGGCCGCGAATGGCTGCGGCGGCGGCCGCCGTCAGGTTGCCCGTCGTCGGATGCGCGTC
GTCGGATGCCCGCCGCAGCC

Product: arginyl-tRNA synthetase

Products: NA

Alternate protein names: Arginine--tRNA ligase; ArgRS [H]

Number of amino acids: Translated: 593; Mature: 593

Protein sequence:

>593_residues
MLPAHKQTLEALLADSVKQVAHALKGADAAFVAPAITLERPKVAAHGDVACNVAMQLAKPLGTNPRQLAEQIVAALTAQP
AAQGLVEAAEIAGPGFINLRLSAAAKQAVIAAVFEQGRAFGTSDREKGKQVLLEFVSANPTGPLHVGHGRQAALGDVLAN
VIASQGYAVHREFYYNDAGVQIGNLAISTQARARGLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVKGTGDV
EDLDAIRKFAVTYLRREQDMDLQAFGVKFDQYYLESSLYSEGRVEKTVDALVKAGMTYEQDGALWLRTTDEGDDKDRVMR
KSDGTYTYFVPDVAYHVTKWERGFTKVINIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKR
AGSYVTVRDLIEWSGGAAAGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENPVYYVQYAHARIC
SVLNELKSRYNVDVAQLPGADLSQLTSAQAASLMQKLAEYPDMLTHAANELAPHAVAFYLRDLAGEFHSFYNAERVLVDD
EAPRNARAALLAATRQVLENGLAVLGVSAPAKM

Sequences:

>Translated_593_residues
MLPAHKQTLEALLADSVKQVAHALKGADAAFVAPAITLERPKVAAHGDVACNVAMQLAKPLGTNPRQLAEQIVAALTAQP
AAQGLVEAAEIAGPGFINLRLSAAAKQAVIAAVFEQGRAFGTSDREKGKQVLLEFVSANPTGPLHVGHGRQAALGDVLAN
VIASQGYAVHREFYYNDAGVQIGNLAISTQARARGLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVKGTGDV
EDLDAIRKFAVTYLRREQDMDLQAFGVKFDQYYLESSLYSEGRVEKTVDALVKAGMTYEQDGALWLRTTDEGDDKDRVMR
KSDGTYTYFVPDVAYHVTKWERGFTKVINIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKR
AGSYVTVRDLIEWSGGAAAGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENPVYYVQYAHARIC
SVLNELKSRYNVDVAQLPGADLSQLTSAQAASLMQKLAEYPDMLTHAANELAPHAVAFYLRDLAGEFHSFYNAERVLVDD
EAPRNARAALLAATRQVLENGLAVLGVSAPAKM
>Mature_593_residues
MLPAHKQTLEALLADSVKQVAHALKGADAAFVAPAITLERPKVAAHGDVACNVAMQLAKPLGTNPRQLAEQIVAALTAQP
AAQGLVEAAEIAGPGFINLRLSAAAKQAVIAAVFEQGRAFGTSDREKGKQVLLEFVSANPTGPLHVGHGRQAALGDVLAN
VIASQGYAVHREFYYNDAGVQIGNLAISTQARARGLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVKGTGDV
EDLDAIRKFAVTYLRREQDMDLQAFGVKFDQYYLESSLYSEGRVEKTVDALVKAGMTYEQDGALWLRTTDEGDDKDRVMR
KSDGTYTYFVPDVAYHVTKWERGFTKVINIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKR
AGSYVTVRDLIEWSGGAAAGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENPVYYVQYAHARIC
SVLNELKSRYNVDVAQLPGADLSQLTSAQAASLMQKLAEYPDMLTHAANELAPHAVAFYLRDLAGEFHSFYNAERVLVDD
EAPRNARAALLAATRQVLENGLAVLGVSAPAKM

Specific function: Unknown

COG id: COG0018

COG function: function code J; Arginyl-tRNA synthetase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Homo sapiens, GI15149476, Length=607, Percent_Identity=23.0642504118616, Blast_Score=96, Evalue=1e-19,
Organism=Escherichia coli, GI1788184, Length=608, Percent_Identity=26.9736842105263, Blast_Score=142, Evalue=6e-35,
Organism=Saccharomyces cerevisiae, GI6320548, Length=617, Percent_Identity=26.2560777957861, Blast_Score=134, Evalue=3e-32,
Organism=Saccharomyces cerevisiae, GI6321883, Length=615, Percent_Identity=24.0650406504065, Blast_Score=112, Evalue=2e-25,
Organism=Drosophila melanogaster, GI28571570, Length=494, Percent_Identity=23.2793522267206, Blast_Score=72, Evalue=8e-13,

Paralogues:

None

Copy number: 789 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001412
- InterPro:   IPR001278
- InterPro:   IPR015945
- InterPro:   IPR005148
- InterPro:   IPR008909
- InterPro:   IPR014729
- InterPro:   IPR009080 [H]

Pfam domain/function: PF03485 Arg_tRNA_synt_N; PF05746 DALR_1; PF00750 tRNA-synt_1d [H]

EC number: =6.1.1.19 [H]

Molecular weight: Translated: 64242; Mature: 64242

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPAHKQTLEALLADSVKQVAHALKGADAAFVAPAITLERPKVAAHGDVACNVAMQLAKP
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCEEEECCCCCCCCCCHHHHHHHHHHHC
LGTNPRQLAEQIVAALTAQPAAQGLVEAAEIAGPGFINLRLSAAAKQAVIAAVFEQGRAF
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHCCCC
GTSDREKGKQVLLEFVSANPTGPLHVGHGRQAALGDVLANVIASQGYAVHREFYYNDAGV
CCCCHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHCCCEEEHEEEECCCCC
QIGNLAISTQARARGLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVKGTGDV
EECCEEEECHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCH
EDLDAIRKFAVTYLRREQDMDLQAFGVKFDQYYLESSLYSEGRVEKTVDALVKAGMTYEQ
HHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEC
DGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTKVINIQGSDHHGTIA
CCEEEEEECCCCCCHHHHHHCCCCCEEEEECHHHHHHHHHHCCCEEEEEECCCCCCCHHH
RVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVRDLIEWSGGAAAG
HHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEHHHHHHCCCCCCCC
QEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENPVYYVQYAHARIC
CCCCCHHHHHHHHCCCCHHEEEEEEECCCCCEEEEEEEEEEECCCCCCEEEEEEHHHHHH
SVLNELKSRYNVDVAQLPGADLSQLTSAQAASLMQKLAEYPDMLTHAANELAPHAVAFYL
HHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDLAGEFHSFYNAERVLVDDEAPRNARAALLAATRQVLENGLAVLGVSAPAKM
HHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCC
>Mature Secondary Structure
MLPAHKQTLEALLADSVKQVAHALKGADAAFVAPAITLERPKVAAHGDVACNVAMQLAKP
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCEEEECCCCCCCCCCHHHHHHHHHHHC
LGTNPRQLAEQIVAALTAQPAAQGLVEAAEIAGPGFINLRLSAAAKQAVIAAVFEQGRAF
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHCCCC
GTSDREKGKQVLLEFVSANPTGPLHVGHGRQAALGDVLANVIASQGYAVHREFYYNDAGV
CCCCHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHCCCEEEHEEEECCCCC
QIGNLAISTQARARGLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVKGTGDV
EECCEEEECHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCH
EDLDAIRKFAVTYLRREQDMDLQAFGVKFDQYYLESSLYSEGRVEKTVDALVKAGMTYEQ
HHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEC
DGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTKVINIQGSDHHGTIA
CCEEEEEECCCCCCHHHHHHCCCCCEEEEECHHHHHHHHHHCCCEEEEEECCCCCCCHHH
RVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVRDLIEWSGGAAAG
HHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEHHHHHHCCCCCCCC
QEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENPVYYVQYAHARIC
CCCCCHHHHHHHHCCCCHHEEEEEEECCCCCEEEEEEEEEEECCCCCCEEEEEEHHHHHH
SVLNELKSRYNVDVAQLPGADLSQLTSAQAASLMQKLAEYPDMLTHAANELAPHAVAFYL
HHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDLAGEFHSFYNAERVLVDDEAPRNARAALLAATRQVLENGLAVLGVSAPAKM
HHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA