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The map label for this gene is yngJ [H]

Identifier: 116690898

GI number: 116690898

Start: 3179731

End: 3180939

Strand: Reverse

Name: yngJ [H]

Synonym: Bcen2424_2878

Alternate gene names: 116690898

Gene position: 3180939-3179731 (Counterclockwise)

Preceding gene: 116690902

Following gene: 116690897

Centisome position: 91.3

GC content: 66.58

Gene sequence:

>1209_bases
ATGGACCTGAATTTCACTCCCGAAGAGGAAGCCTTCCGCACGGAAGTGCAGCGTTTCCTCGCCGCCGAACTGCCGGCGCG
CACCGCGCGCAAGGTGAAGGGCGGCCTGCACCTGACGCGCGACGACATGCGCGAATGGCACGCGATCCTCAATGCGCGCG
GCTGGCTCGCGAGCCACTGGCCGCGCGAATACGGCGGCCCCGGCTGGAGCGTCGCGCAGAAATTCCTGTTCGACAACGAA
TGCGCGCTCGCCGGCGCGCCGCGCATCGTGCCGTTCGGCGTGAACATGCTCGGCCCAGTGCTGATCAGGTACGGCAACGA
AGCGCAGAAGCGTCACTGGCTGCCGCGCATTCTCGACGGCACCGACTGGTGGTGCCAGGGTTATTCGGAACCGGGCGCCG
GTTCCGATCTCGCGGCGGTGAAGACGAGCGCGGTGCGGCGTGTGGATGCGCAGGGCGCTCACTACGTCGTGAACGGCCAG
AAGACGTGGACCACGCTCGGCCACTACGCGAACATGATCTTCTGTCTCGTGCGCACCGCGACCGACGTACGCAAGCAGGA
GGGCATCAGCTTCCTGCTGATCGACATGAATACGCCGGGCGTCGAAGTGCGCCCGATCATCACGCTCGACGGCGAGCATG
AGGTGAACGAGGTGTTCTTCACCGACGTGCGCGTGCCGGTCGAGAACCTGGTCGGCGAGGAGAACCGCGGCTGGACCTAC
GCGAAATACCTGCTCACGTACGAGCGCACCAACATCGCGGGGATCGGCTTCTCGACCGCCGCCCTCGACCGGCTGCGCGC
GGTGGCCGCGAAGGTCACGAAGAACGGCCGGCCGCTGGCCGACGATCCGTTCTTCGCGGCGCGGCTCGCCCGCGTCGAGA
TCGAACTGGAAAACATGCGCACGACCAACCTGCGCGTGCTGGCCGCGGTTGCGGGCGGCGGCGTGCCGGGCGCGGAAAGC
TCGATGCTGAAGATCCGCGGCACGCAGATCCGCCAGGAGATCACCGCGCTGATGCGGCGCGCGATGGGGCCGTACGCGCA
GCCGTTCGTCGACGACGCGTTCGACGCCGATTACGACGGCGAACCGGTCGGCCCGGAAGAAGCCGCGAGCGCCGCGCAGC
AGTATTTCAACAACCGCAAGCTGTCGATCTTCGGCGGCTCGAACGAGATCCAGAAGAACATCATCGCGAAGATGATGCTC
GGGCTGTAA

Upstream 100 bases:

>100_bases
CGCTGCTCGTCGATCTCGTCGCGCGCGGCGCGGATTTCGCGAGCCTGAACCGCATCGACTGAACACCCACCGCACCCACC
GCATTTGCCACGGACCGAAG

Downstream 100 bases:

>100_bases
CGAGGGACGCGACGATGGATTTTCAGCACACAGAAGACCGCCGGATGCTGGCGGACACGTTGAACCGCTTCATCGCCGAA
CAGTACGCGTTCCCGGTGCG

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MDLNFTPEEEAFRTEVQRFLAAELPARTARKVKGGLHLTRDDMREWHAILNARGWLASHWPREYGGPGWSVAQKFLFDNE
CALAGAPRIVPFGVNMLGPVLIRYGNEAQKRHWLPRILDGTDWWCQGYSEPGAGSDLAAVKTSAVRRVDAQGAHYVVNGQ
KTWTTLGHYANMIFCLVRTATDVRKQEGISFLLIDMNTPGVEVRPIITLDGEHEVNEVFFTDVRVPVENLVGEENRGWTY
AKYLLTYERTNIAGIGFSTAALDRLRAVAAKVTKNGRPLADDPFFAARLARVEIELENMRTTNLRVLAAVAGGGVPGAES
SMLKIRGTQIRQEITALMRRAMGPYAQPFVDDAFDADYDGEPVGPEEAASAAQQYFNNRKLSIFGGSNEIQKNIIAKMML
GL

Sequences:

>Translated_402_residues
MDLNFTPEEEAFRTEVQRFLAAELPARTARKVKGGLHLTRDDMREWHAILNARGWLASHWPREYGGPGWSVAQKFLFDNE
CALAGAPRIVPFGVNMLGPVLIRYGNEAQKRHWLPRILDGTDWWCQGYSEPGAGSDLAAVKTSAVRRVDAQGAHYVVNGQ
KTWTTLGHYANMIFCLVRTATDVRKQEGISFLLIDMNTPGVEVRPIITLDGEHEVNEVFFTDVRVPVENLVGEENRGWTY
AKYLLTYERTNIAGIGFSTAALDRLRAVAAKVTKNGRPLADDPFFAARLARVEIELENMRTTNLRVLAAVAGGGVPGAES
SMLKIRGTQIRQEITALMRRAMGPYAQPFVDDAFDADYDGEPVGPEEAASAAQQYFNNRKLSIFGGSNEIQKNIIAKMML
GL
>Mature_402_residues
MDLNFTPEEEAFRTEVQRFLAAELPARTARKVKGGLHLTRDDMREWHAILNARGWLASHWPREYGGPGWSVAQKFLFDNE
CALAGAPRIVPFGVNMLGPVLIRYGNEAQKRHWLPRILDGTDWWCQGYSEPGAGSDLAAVKTSAVRRVDAQGAHYVVNGQ
KTWTTLGHYANMIFCLVRTATDVRKQEGISFLLIDMNTPGVEVRPIITLDGEHEVNEVFFTDVRVPVENLVGEENRGWTY
AKYLLTYERTNIAGIGFSTAALDRLRAVAAKVTKNGRPLADDPFFAARLARVEIELENMRTTNLRVLAAVAGGGVPGAES
SMLKIRGTQIRQEITALMRRAMGPYAQPFVDDAFDADYDGEPVGPEEAASAAQQYFNNRKLSIFGGSNEIQKNIIAKMML
GL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557231, Length=412, Percent_Identity=25.4854368932039, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI187960098, Length=412, Percent_Identity=25.4854368932039, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI226958412, Length=267, Percent_Identity=29.2134831460674, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI48976061, Length=340, Percent_Identity=27.9411764705882, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI211971008, Length=340, Percent_Identity=27.9411764705882, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI226958414, Length=234, Percent_Identity=30.3418803418803, Blast_Score=102, Evalue=6e-22,
Organism=Homo sapiens, GI4501859, Length=406, Percent_Identity=27.0935960591133, Blast_Score=102, Evalue=6e-22,
Organism=Homo sapiens, GI4501857, Length=404, Percent_Identity=23.5148514851485, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI4557233, Length=357, Percent_Identity=28.0112044817927, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI7656849, Length=312, Percent_Identity=26.9230769230769, Blast_Score=82, Evalue=8e-16,
Organism=Homo sapiens, GI21361497, Length=213, Percent_Identity=26.2910798122066, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI38505218, Length=239, Percent_Identity=30.1255230125523, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI76496475, Length=206, Percent_Identity=29.6116504854369, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI4557235, Length=206, Percent_Identity=29.6116504854369, Blast_Score=79, Evalue=6e-15,
Organism=Escherichia coli, GI87081958, Length=311, Percent_Identity=25.7234726688103, Blast_Score=88, Evalue=9e-19,
Organism=Escherichia coli, GI1786223, Length=328, Percent_Identity=23.4756097560976, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI87081702, Length=285, Percent_Identity=26.6666666666667, Blast_Score=62, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17570075, Length=414, Percent_Identity=25.3623188405797, Blast_Score=109, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17534899, Length=407, Percent_Identity=25.5528255528256, Blast_Score=105, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI17538396, Length=325, Percent_Identity=25.8461538461538, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17506239, Length=360, Percent_Identity=26.9444444444444, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17569725, Length=376, Percent_Identity=26.3297872340426, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17508101, Length=371, Percent_Identity=25.6064690026954, Blast_Score=94, Evalue=9e-20,
Organism=Caenorhabditis elegans, GI17551932, Length=356, Percent_Identity=26.685393258427, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17505929, Length=356, Percent_Identity=26.9662921348315, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI32563615, Length=239, Percent_Identity=29.7071129707113, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI71985184, Length=173, Percent_Identity=31.2138728323699, Blast_Score=79, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI71985192, Length=173, Percent_Identity=31.2138728323699, Blast_Score=78, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI71990804, Length=269, Percent_Identity=25.2788104089219, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17562446, Length=278, Percent_Identity=27.3381294964029, Blast_Score=73, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17533517, Length=357, Percent_Identity=25.4901960784314, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21356377, Length=355, Percent_Identity=26.7605633802817, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI21355753, Length=267, Percent_Identity=27.3408239700375, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24660351, Length=361, Percent_Identity=26.8698060941828, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24666513, Length=361, Percent_Identity=25.4847645429363, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI281363737, Length=207, Percent_Identity=28.0193236714976, Blast_Score=82, Evalue=8e-16,
Organism=Drosophila melanogaster, GI24646207, Length=359, Percent_Identity=26.4623955431755, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 44658; Mature: 44658

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLNFTPEEEAFRTEVQRFLAAELPARTARKVKGGLHLTRDDMREWHAILNARGWLASHW
CCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCEECHHHHHHHHHHHHCCCCHHHCC
PREYGGPGWSVAQKFLFDNECALAGAPRIVPFGVNMLGPVLIRYGNEAQKRHWLPRILDG
CHHHCCCCHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHCCCHHHHHCCCCHHCCC
TDWWCQGYSEPGAGSDLAAVKTSAVRRVDAQGAHYVVNGQKTWTTLGHYANMIFCLVRTA
CCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH
TDVRKQEGISFLLIDMNTPGVEVRPIITLDGEHEVNEVFFTDVRVPVENLVGEENRGWTY
HHHHHHCCCEEEEEECCCCCEEEEEEEEECCCCCCCCEEEEECCCCHHHHCCCCCCCEEE
AKYLLTYERTNIAGIGFSTAALDRLRAVAAKVTKNGRPLADDPFFAARLARVEIELENMR
EHEEEEEECCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEEEEECCCC
TTNLRVLAAVAGGGVPGAESSMLKIRGTQIRQEITALMRRAMGPYAQPFVDDAFDADYDG
CCCEEEEEEEECCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCC
EPVGPEEAASAAQQYFNNRKLSIFGGSNEIQKNIIAKMMLGL
CCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDLNFTPEEEAFRTEVQRFLAAELPARTARKVKGGLHLTRDDMREWHAILNARGWLASHW
CCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCEECHHHHHHHHHHHHCCCCHHHCC
PREYGGPGWSVAQKFLFDNECALAGAPRIVPFGVNMLGPVLIRYGNEAQKRHWLPRILDG
CHHHCCCCHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHCCCHHHHHCCCCHHCCC
TDWWCQGYSEPGAGSDLAAVKTSAVRRVDAQGAHYVVNGQKTWTTLGHYANMIFCLVRTA
CCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH
TDVRKQEGISFLLIDMNTPGVEVRPIITLDGEHEVNEVFFTDVRVPVENLVGEENRGWTY
HHHHHHCCCEEEEEECCCCCEEEEEEEEECCCCCCCCEEEEECCCCHHHHCCCCCCCEEE
AKYLLTYERTNIAGIGFSTAALDRLRAVAAKVTKNGRPLADDPFFAARLARVEIELENMR
EHEEEEEECCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEEEEECCCC
TTNLRVLAAVAGGGVPGAESSMLKIRGTQIRQEITALMRRAMGPYAQPFVDDAFDADYDG
CCCEEEEEEEECCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCC
EPVGPEEAASAAQQYFNNRKLSIFGGSNEIQKNIIAKMMLGL
CCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]