| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is tauC [H]
Identifier: 116690902
GI number: 116690902
Start: 3188535
End: 3189344
Strand: Reverse
Name: tauC [H]
Synonym: Bcen2424_2884
Alternate gene names: 116690902
Gene position: 3189344-3188535 (Counterclockwise)
Preceding gene: 116690903
Following gene: 116690898
Centisome position: 91.55
GC content: 69.14
Gene sequence:
>810_bases GTGCGTCCCGCCCGGACATCACATCGTTACCGGTTGCCGGGGCAAGGAAAGACGGCCGGGTTGAGCGCTGCGACGATCGC GGCATTGGCCGCGCTCTGGTGGGTCGCGACGCATTTCCAGTGGCTGCCGCCGCTGTTCCTGCCCGCACCGGAAGCAGTGT GGACCGCGTTCGTCGACGCATGGCACGGCCGCATCCAGGGCGGCCTGCCGTTGTCCGAACATCTGCTGTGGAGCGCCGCG CGCGTGTTCGGTGCGTTCCTGCTCGCGACCGCGATCGGCGTGCCGGCCGGCATCCTGATGGGCGTGAGCCGCATCGCGCG CGGCGTGCTCGATCCGCTGCTGGAGTTCTATCGGCCGCTGCCGCCGCTCGCGTATCTGCCGCTCGTCGTGATCTGGTTCG GCATCGACGAAACGGCGAAGCTGGTCGTGATCTTTCTCGCGTGCTTCGCGCCGATCGCGATGGCCGCGCGCGCCGGCGTG CGTGCCGCAACCGTCGAGCAGATCAACGCCGCGTATTCGCTCGGCGGCAGCTTCGCGCAGATCGTGCGGCATGTCGTGCT GCCGGCCGCGCTGCCGGAGATCCTCACCGGCCTGCGGATCGCGATCGGGTTCGGCTGGACGACGCTCGTCGCGGCCGAGA TGGTCGCCGCGACGGCCGGGCTCGGGCAGATGGTGCTCAACGCATCGAGTTTCCTGCGCACCGACATCGTCGTGATGGGC ATCCTGATCATCGGCGCGATCGCATGGCTGTTCGATCTGGCGATGCGCTGGATCGAGCGGCGGGTGGTGCCGTGGAAGGG GCGAGGGTAG
Upstream 100 bases:
>100_bases GCACAGGCAGGACGACATGAGCACGCAGGATTCCTGGGCGGCCGATCGCGCGACCGCCGACTCCGAACGGGATGCGCGCG CGGCGCAACAGCGCCATGCG
Downstream 100 bases:
>100_bases GCCGTACAGGCGGAAACGACGGTGTTTGGCGTCCGTGCAGCGAGTGCGAAGGGGCCGAGGTTCGTATCGATCGAACCCCG GCCCCTGTTGCTTGATGCGG
Product: binding-protein-dependent transport systems inner membrane component
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MRPARTSHRYRLPGQGKTAGLSAATIAALAALWWVATHFQWLPPLFLPAPEAVWTAFVDAWHGRIQGGLPLSEHLLWSAA RVFGAFLLATAIGVPAGILMGVSRIARGVLDPLLEFYRPLPPLAYLPLVVIWFGIDETAKLVVIFLACFAPIAMAARAGV RAATVEQINAAYSLGGSFAQIVRHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVAATAGLGQMVLNASSFLRTDIVVMG ILIIGAIAWLFDLAMRWIERRVVPWKGRG
Sequences:
>Translated_269_residues MRPARTSHRYRLPGQGKTAGLSAATIAALAALWWVATHFQWLPPLFLPAPEAVWTAFVDAWHGRIQGGLPLSEHLLWSAA RVFGAFLLATAIGVPAGILMGVSRIARGVLDPLLEFYRPLPPLAYLPLVVIWFGIDETAKLVVIFLACFAPIAMAARAGV RAATVEQINAAYSLGGSFAQIVRHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVAATAGLGQMVLNASSFLRTDIVVMG ILIIGAIAWLFDLAMRWIERRVVPWKGRG >Mature_269_residues MRPARTSHRYRLPGQGKTAGLSAATIAALAALWWVATHFQWLPPLFLPAPEAVWTAFVDAWHGRIQGGLPLSEHLLWSAA RVFGAFLLATAIGVPAGILMGVSRIARGVLDPLLEFYRPLPPLAYLPLVVIWFGIDETAKLVVIFLACFAPIAMAARAGV RAATVEQINAAYSLGGSFAQIVRHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVAATAGLGQMVLNASSFLRTDIVVMG ILIIGAIAWLFDLAMRWIERRVVPWKGRG
Specific function: Part of a binding-protein-dependent transport system for taurine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=253, Percent_Identity=49.802371541502, Blast_Score=226, Evalue=2e-60, Organism=Escherichia coli, GI87081802, Length=238, Percent_Identity=36.1344537815126, Blast_Score=132, Evalue=2e-32, Organism=Escherichia coli, GI1789033, Length=169, Percent_Identity=30.7692307692308, Blast_Score=67, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 28962; Mature: 28962
Theoretical pI: Translated: 11.02; Mature: 11.02
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPARTSHRYRLPGQGKTAGLSAATIAALAALWWVATHFQWLPPLFLPAPEAVWTAFVDA CCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH WHGRIQGGLPLSEHLLWSAARVFGAFLLATAIGVPAGILMGVSRIARGVLDPLLEFYRPL HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCC PPLAYLPLVVIWFGIDETAKLVVIFLACFAPIAMAARAGVRAATVEQINAAYSLGGSFAQ CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHH IVRHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVAATAGLGQMVLNASSFLRTDIVVMG HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILIIGAIAWLFDLAMRWIERRVVPWKGRG HHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRPARTSHRYRLPGQGKTAGLSAATIAALAALWWVATHFQWLPPLFLPAPEAVWTAFVDA CCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH WHGRIQGGLPLSEHLLWSAARVFGAFLLATAIGVPAGILMGVSRIARGVLDPLLEFYRPL HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCC PPLAYLPLVVIWFGIDETAKLVVIFLACFAPIAMAARAGVRAATVEQINAAYSLGGSFAQ CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHH IVRHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVAATAGLGQMVLNASSFLRTDIVVMG HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILIIGAIAWLFDLAMRWIERRVVPWKGRG HHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503 [H]