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The map label for this gene is yngJ [H]

Identifier: 116690897

GI number: 116690897

Start: 3178571

End: 3179716

Strand: Reverse

Name: yngJ [H]

Synonym: Bcen2424_2877

Alternate gene names: 116690897

Gene position: 3179716-3178571 (Counterclockwise)

Preceding gene: 116690898

Following gene: 116690896

Centisome position: 91.27

GC content: 71.47

Gene sequence:

>1146_bases
ATGGATTTTCAGCACACAGAAGACCGCCGGATGCTGGCGGACACGTTGAACCGCTTCATCGCCGAACAGTACGCGTTCCC
GGTGCGCGACCGCATCGCGCAGTCGGCCGAAGGGTTCGATCGCGCGATGTGGCAGCGCTTCGCCGAACTCGGCACGGTCG
GCGCGCTGTTCGCCGAAGCCGACGGCGGCTTCGGCGGCGCGGGCTTCGATATCGCCGTGGTGTTCGAATGCCTCGGGCGC
GGGCTCGTCGTCGAGCCGTTCCTCGGCGCGCTGCTCGCGGGCCGTGCGCTCGCGCTCGCCGGTGGTGCCGCGCATCGCGA
CCGGCTCGCCGCGCTGATCGACGGCAGCGCGAGCGCCGCGTTCGCGCACGACGAACCGGGCTCGCACTACGAACTGACGA
CGGTGCGCACGCGCGCCGAACGTTCGGGCGACGGCTGGGTGCTGACCGGCGCGAAGGGCGTCGTCGACCAGGCCGCGCAG
GCGGCGTTCTTCGTCGTCAGCGCGCGGGTGTTCGGCAACGACGACGACGCGGCCGGCATCGGCCTGTTCGTCGTGCCGGC
CGATGCGCCGGGCGTGTCGCTGCGCGACTACCGGAAGATCGACGGCGGCCGCGCGGCCGAAGTGCGCTTCGAGCGGGTCG
CGCTGCCGGCCGCTGCCGCGCTCGGCGCGCCGGATGCGCTCGACGGCGAAGCGGGCGCCGAGCTGCTCGAACGCGTGCTC
GGCTACGGGCTGCTCGCGCTGTCGGCTGAAGCGCTCGGCGCGATGGACGTCGCGAAGGAGCACACGCTCGACTACCTGCG
CACGCGCAAGCAGTTCGGGCTGCCGATCGGCAGCTTCCAGGCGCTGCAGCACCGGATGGCCGACCTGCTGCTCGAAGTCG
AGCAGGCGCGCTCGGCCGTGATCAACGCGGCCGCGCAGCTCGATGCGCCGCGCGCGGTGCGCGAGCGCGCGCTCGCGGCG
GCGAAATACAGCATCGGCCGGATCGGCACGCTCGTCGCCGAGGAAAGCATCCAGCTGCACGGCGGGATCGGGATGACGTG
GGAGCTGCCGCTGTCGCACTACGCGAAGCGGCTCGTGATGATCGATCACCAGCTGGGCGACGAGGATCACCATCTCGCGC
GCTACATCGCGCTGTCGAAACAGTAA

Upstream 100 bases:

>100_bases
ATTTCAACAACCGCAAGCTGTCGATCTTCGGCGGCTCGAACGAGATCCAGAAGAACATCATCGCGAAGATGATGCTCGGG
CTGTAACGAGGGACGCGACG

Downstream 100 bases:

>100_bases
GGGCGCACGGCGCGAATGGAGGAGACAACGATGACGAACGAACGGTGCGCGCTGCCGCTGGCCGGCGTGAAGGTGCTCGA
TTTTTCGCGCGTGCTCGCGG

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MDFQHTEDRRMLADTLNRFIAEQYAFPVRDRIAQSAEGFDRAMWQRFAELGTVGALFAEADGGFGGAGFDIAVVFECLGR
GLVVEPFLGALLAGRALALAGGAAHRDRLAALIDGSASAAFAHDEPGSHYELTTVRTRAERSGDGWVLTGAKGVVDQAAQ
AAFFVVSARVFGNDDDAAGIGLFVVPADAPGVSLRDYRKIDGGRAAEVRFERVALPAAAALGAPDALDGEAGAELLERVL
GYGLLALSAEALGAMDVAKEHTLDYLRTRKQFGLPIGSFQALQHRMADLLLEVEQARSAVINAAAQLDAPRAVRERALAA
AKYSIGRIGTLVAEESIQLHGGIGMTWELPLSHYAKRLVMIDHQLGDEDHHLARYIALSKQ

Sequences:

>Translated_381_residues
MDFQHTEDRRMLADTLNRFIAEQYAFPVRDRIAQSAEGFDRAMWQRFAELGTVGALFAEADGGFGGAGFDIAVVFECLGR
GLVVEPFLGALLAGRALALAGGAAHRDRLAALIDGSASAAFAHDEPGSHYELTTVRTRAERSGDGWVLTGAKGVVDQAAQ
AAFFVVSARVFGNDDDAAGIGLFVVPADAPGVSLRDYRKIDGGRAAEVRFERVALPAAAALGAPDALDGEAGAELLERVL
GYGLLALSAEALGAMDVAKEHTLDYLRTRKQFGLPIGSFQALQHRMADLLLEVEQARSAVINAAAQLDAPRAVRERALAA
AKYSIGRIGTLVAEESIQLHGGIGMTWELPLSHYAKRLVMIDHQLGDEDHHLARYIALSKQ
>Mature_381_residues
MDFQHTEDRRMLADTLNRFIAEQYAFPVRDRIAQSAEGFDRAMWQRFAELGTVGALFAEADGGFGGAGFDIAVVFECLGR
GLVVEPFLGALLAGRALALAGGAAHRDRLAALIDGSASAAFAHDEPGSHYELTTVRTRAERSGDGWVLTGAKGVVDQAAQ
AAFFVVSARVFGNDDDAAGIGLFVVPADAPGVSLRDYRKIDGGRAAEVRFERVALPAAAALGAPDALDGEAGAELLERVL
GYGLLALSAEALGAMDVAKEHTLDYLRTRKQFGLPIGSFQALQHRMADLLLEVEQARSAVINAAAQLDAPRAVRERALAA
AKYSIGRIGTLVAEESIQLHGGIGMTWELPLSHYAKRLVMIDHQLGDEDHHLARYIALSKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=362, Percent_Identity=28.7292817679558, Blast_Score=119, Evalue=4e-27,
Organism=Homo sapiens, GI226958412, Length=366, Percent_Identity=28.9617486338798, Blast_Score=118, Evalue=1e-26,
Organism=Homo sapiens, GI4501857, Length=361, Percent_Identity=25.4847645429363, Blast_Score=115, Evalue=6e-26,
Organism=Homo sapiens, GI226958414, Length=345, Percent_Identity=28.695652173913, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI4501859, Length=355, Percent_Identity=25.9154929577465, Blast_Score=102, Evalue=5e-22,
Organism=Homo sapiens, GI7656849, Length=332, Percent_Identity=28.0120481927711, Blast_Score=102, Evalue=6e-22,
Organism=Homo sapiens, GI4557231, Length=361, Percent_Identity=25.4847645429363, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI187960098, Length=361, Percent_Identity=25.4847645429363, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI21361497, Length=389, Percent_Identity=24.6786632390745, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI76496475, Length=363, Percent_Identity=26.4462809917355, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI4557235, Length=363, Percent_Identity=26.4462809917355, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI4503943, Length=394, Percent_Identity=25.6345177664975, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI7669494, Length=385, Percent_Identity=25.4545454545455, Blast_Score=71, Evalue=2e-12,
Organism=Escherichia coli, GI87081958, Length=251, Percent_Identity=25.4980079681275, Blast_Score=75, Evalue=8e-15,
Organism=Escherichia coli, GI1786223, Length=366, Percent_Identity=23.224043715847, Blast_Score=63, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17570075, Length=369, Percent_Identity=28.9972899728997, Blast_Score=113, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17508101, Length=364, Percent_Identity=27.1978021978022, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17534899, Length=364, Percent_Identity=27.4725274725275, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71985184, Length=381, Percent_Identity=29.3963254593176, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17569725, Length=360, Percent_Identity=26.6666666666667, Blast_Score=102, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17506239, Length=365, Percent_Identity=26.8493150684932, Blast_Score=101, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI17538396, Length=342, Percent_Identity=27.1929824561404, Blast_Score=99, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI71985192, Length=385, Percent_Identity=27.7922077922078, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI71990804, Length=285, Percent_Identity=28.7719298245614, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17533517, Length=339, Percent_Identity=25.9587020648968, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI21355753, Length=358, Percent_Identity=29.0502793296089, Blast_Score=112, Evalue=6e-25,
Organism=Drosophila melanogaster, GI21356377, Length=363, Percent_Identity=26.9972451790634, Blast_Score=108, Evalue=5e-24,
Organism=Drosophila melanogaster, GI24666513, Length=361, Percent_Identity=25.7617728531856, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24660351, Length=360, Percent_Identity=26.9444444444444, Blast_Score=96, Evalue=5e-20,
Organism=Drosophila melanogaster, GI24646207, Length=360, Percent_Identity=27.5, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI281363737, Length=359, Percent_Identity=23.3983286908078, Blast_Score=69, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 40674; Mature: 40674

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFQHTEDRRMLADTLNRFIAEQYAFPVRDRIAQSAEGFDRAMWQRFAELGTVGALFAEA
CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC
DGGFGGAGFDIAVVFECLGRGLVVEPFLGALLAGRALALAGGAAHRDRLAALIDGSASAA
CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHCCCCHHHHHHHHHCCCCCCEE
FAHDEPGSHYELTTVRTRAERSGDGWVLTGAKGVVDQAAQAAFFVVSARVFGNDDDAAGI
ECCCCCCCCEEEEEEHHHHCCCCCCEEEECCCHHHHHHHHHHHHEEEEHEECCCCCCCCE
GLFVVPADAPGVSLRDYRKIDGGRAAEVRFERVALPAAAALGAPDALDGEAGAELLERVL
EEEEEECCCCCCCHHHHHHCCCCCCHHEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
GYGLLALSAEALGAMDVAKEHTLDYLRTRKQFGLPIGSFQALQHRMADLLLEVEQARSAV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
INAAAQLDAPRAVRERALAAAKYSIGRIGTLVAEESIQLHGGIGMTWELPLSHYAKRLVM
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEECCHHHHHHHHHH
IDHQLGDEDHHLARYIALSKQ
EEHHCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MDFQHTEDRRMLADTLNRFIAEQYAFPVRDRIAQSAEGFDRAMWQRFAELGTVGALFAEA
CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC
DGGFGGAGFDIAVVFECLGRGLVVEPFLGALLAGRALALAGGAAHRDRLAALIDGSASAA
CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHCCCCHHHHHHHHHCCCCCCEE
FAHDEPGSHYELTTVRTRAERSGDGWVLTGAKGVVDQAAQAAFFVVSARVFGNDDDAAGI
ECCCCCCCCEEEEEEHHHHCCCCCCEEEECCCHHHHHHHHHHHHEEEEHEECCCCCCCCE
GLFVVPADAPGVSLRDYRKIDGGRAAEVRFERVALPAAAALGAPDALDGEAGAELLERVL
EEEEEECCCCCCCHHHHHHCCCCCCHHEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
GYGLLALSAEALGAMDVAKEHTLDYLRTRKQFGLPIGSFQALQHRMADLLLEVEQARSAV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
INAAAQLDAPRAVRERALAAAKYSIGRIGTLVAEESIQLHGGIGMTWELPLSHYAKRLVM
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEECCHHHHHHHHHH
IDHQLGDEDHHLARYIALSKQ
EEHHCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]