| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690889
Identifier: 116690889
GI number: 116690889
Start: 3168764
End: 3169366
Strand: Reverse
Name: 116690889
Synonym: Bcen2424_2869
Alternate gene names: NA
Gene position: 3169366-3168764 (Counterclockwise)
Preceding gene: 116690891
Following gene: 116690886
Centisome position: 90.97
GC content: 72.64
Gene sequence:
>603_bases ATGGCCGTTTTGCCTGCCGCGATCCACGCCATGCCGAAGGAAGTCCCCGATTCGTTGCGCCCCCTTTTTCGCCCGCTGCG ACACTTCGCCGCGCTGGCCTGCATGAGCGCCGCGCTGGCCGCGTGCTCGCCGTCGTACGACTGGCGCACGCTGCACAACG ATGCCGGCTACACGATCGACCTGCCGGCGAAGCCGACCGTCGAGGAGCAGCCGGTGGCGCTCGGCGGCACGTCGATGCCG ATGCGGATGCAGGCCGCGCACGTCGACGGCGCGGTGTTCGCGGTCGGCACGCTGACGCTGCCGGACGACCGCGACGACAC GCGCCGCACGGCACTCGACTTCCTGCGCGCGGGGCTGTCGCGCAACCTCGAAGGCGCGCCGCAGACGGCCGCGGTGCCCG TGCCGCTCGCGGCCGGCGGCGCGGTGAACGGGCTCGAACTGCGTATCGCGGGGGCCGCCGCCGGCGGCGATCGCGCGCGC AAGACGATCGTCGCGCGGCTTGCCGCGCGCGGCCGGCACGCATACCAGGCCGTCGTGATCGCCGACGGGCCGCTCGCGCA GGAGCAGCTGGACCAGTTTTTCGGCTCGTTCAAACTCGATTGA
Upstream 100 bases:
>100_bases ATCGATGCAAAGGACGTCGAAATTCGGCGCTCATTTTAGCGCGAATGCGGCGTGTGCACCGGCGGCGGCCGCGCATCCCG GTTTTCAGGTTCGGCGGATA
Downstream 100 bases:
>100_bases CGACGGCCGGCGAGGGCGCTCTGACAGGCAACGGCAACTGAAAGTTCATTCGCAGCTTTCGACGCTAATCACCGGATTTT GCGAGGGTTTTTCGGCTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MAVLPAAIHAMPKEVPDSLRPLFRPLRHFAALACMSAALAACSPSYDWRTLHNDAGYTIDLPAKPTVEEQPVALGGTSMP MRMQAAHVDGAVFAVGTLTLPDDRDDTRRTALDFLRAGLSRNLEGAPQTAAVPVPLAAGGAVNGLELRIAGAAAGGDRAR KTIVARLAARGRHAYQAVVIADGPLAQEQLDQFFGSFKLD
Sequences:
>Translated_200_residues MAVLPAAIHAMPKEVPDSLRPLFRPLRHFAALACMSAALAACSPSYDWRTLHNDAGYTIDLPAKPTVEEQPVALGGTSMP MRMQAAHVDGAVFAVGTLTLPDDRDDTRRTALDFLRAGLSRNLEGAPQTAAVPVPLAAGGAVNGLELRIAGAAAGGDRAR KTIVARLAARGRHAYQAVVIADGPLAQEQLDQFFGSFKLD >Mature_199_residues AVLPAAIHAMPKEVPDSLRPLFRPLRHFAALACMSAALAACSPSYDWRTLHNDAGYTIDLPAKPTVEEQPVALGGTSMPM RMQAAHVDGAVFAVGTLTLPDDRDDTRRTALDFLRAGLSRNLEGAPQTAAVPVPLAAGGAVNGLELRIAGAAAGGDRARK TIVARLAARGRHAYQAVVIADGPLAQEQLDQFFGSFKLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21075; Mature: 20944
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVLPAAIHAMPKEVPDSLRPLFRPLRHFAALACMSAALAACSPSYDWRTLHNDAGYTID CCCCCHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEE LPAKPTVEEQPVALGGTSMPMRMQAAHVDGAVFAVGTLTLPDDRDDTRRTALDFLRAGLS CCCCCCCCCCCEEECCCCCCCEEEHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHH RNLEGAPQTAAVPVPLAAGGAVNGLELRIAGAAAGGDRARKTIVARLAARGRHAYQAVVI CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEE ADGPLAQEQLDQFFGSFKLD ECCCCCHHHHHHHHHCCCCC >Mature Secondary Structure AVLPAAIHAMPKEVPDSLRPLFRPLRHFAALACMSAALAACSPSYDWRTLHNDAGYTID CCCCHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEE LPAKPTVEEQPVALGGTSMPMRMQAAHVDGAVFAVGTLTLPDDRDDTRRTALDFLRAGLS CCCCCCCCCCCEEECCCCCCCEEEHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHH RNLEGAPQTAAVPVPLAAGGAVNGLELRIAGAAAGGDRARKTIVARLAARGRHAYQAVVI CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEE ADGPLAQEQLDQFFGSFKLD ECCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA