| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is hisC2 [H]
Identifier: 116690825
GI number: 116690825
Start: 3101473
End: 3102540
Strand: Direct
Name: hisC2 [H]
Synonym: Bcen2424_2805
Alternate gene names: 116690825
Gene position: 3101473-3102540 (Clockwise)
Preceding gene: 116690824
Following gene: 116690829
Centisome position: 89.02
GC content: 67.51
Gene sequence:
>1068_bases GTGAGCCGTTACTGGAGCGATGTCGTTCAGCAACTCGTGCCTTACGTGCCGGGCGAACAGCCCGCGCTCGCGCACCCCGT CAAGCTGAACACCAACGAGAATCCCTATCCGCCGTCGCCGCGTGTCGTCGCGGCAATCGCACGCGAACTCGGCGAGACCG GCGACACGCTGCGCCGCTATCCGGACCCGGTCGCGCGCGCACTGCGCGAGACGGTCGCGGCCCATCACCGCATCCAGCCC GAACAGGTGTTCGTCGGCAATGGCTCCGACGAGGTGCTCGCGCACGCGTTCCAGGCGCTGCTCAAGCACGACCGGCCGCT GCGCTTTCCCGACATCACGTACAGCTTCTACCCGACCTACGCGCGCCTGTACGGCGTCGAGACCACGGTCGTGCCGCTCG CGGACGATTTCTCGATCCGCGTCGACGACTATCTCGACGACGCCGGCGGCGTGCTGTTTCCGAACCCGAATGCGCCGACC GGGCGCGCGCTGCCGCTCGCGGACGTCGAGCGGATCGCGGCCGCGAATCCGTCGTCGGTGGTCGTGATCGACGAAGCGTA CGTCGATTTCGGCGCGCAGTCGGCCATCACGCTGATCGACCGTCATCCGAACCTGCTCGTCGTGCATACGACGTCGAAGG CGCGCTCGCTCGCGGGCATGCGCGTCGGCTTCGCGTTCGGCGACGCGGCGCTGATCGACGCGCTGAACCGCGTGAAGGAC AGCTTCAACTCGTACCCGCTCGACCGGCTCGCGCAGGTTGCCGCGCAGGCCGCGTATGAAGACACCGACTATTTCAACGC CACCTGCCGGCGCGTGATCGACAGCCGCGCGCGGCTCACGCATGCGCTCGACGCACTCGGCTTCGAGATCGTGCCGTCGG CCGCGAATTTCGTGTTCGCGCGCCATCCCGCGCACGACGCAAGCGCGATCGCGGCCAAGCTGAAAGAACGGGAAATTTTC GTGCGGCACTTCCGGCTGCCGCGGATCGACCAGCATCTGCGCATCACCGTCGGCACCGATGCCGAATGCGATGCACTCGT CGCGGCGTTACGCGAGTTGCTGGCCTGA
Upstream 100 bases:
>100_bases CGGTAGCGTCGGCCGGCCGGCGCAACCGGGCGGCCTCGCCCGCCCCACCGCGACGCGCACATGCGGTAATCTGGACGCTT TGCCCGACAGGAGCCAAGCG
Downstream 100 bases:
>100_bases CACGGAAGAACCGGCGCCGGGCGGCGCCGATCTGAAAGAAAGCGCGACGCGCGCGCCACACAAAGCGCGCGTCAGCGCAG GATCACGACGCGTCGTCGCC
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase 2 [H]
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MSRYWSDVVQQLVPYVPGEQPALAHPVKLNTNENPYPPSPRVVAAIARELGETGDTLRRYPDPVARALRETVAAHHRIQP EQVFVGNGSDEVLAHAFQALLKHDRPLRFPDITYSFYPTYARLYGVETTVVPLADDFSIRVDDYLDDAGGVLFPNPNAPT GRALPLADVERIAAANPSSVVVIDEAYVDFGAQSAITLIDRHPNLLVVHTTSKARSLAGMRVGFAFGDAALIDALNRVKD SFNSYPLDRLAQVAAQAAYEDTDYFNATCRRVIDSRARLTHALDALGFEIVPSAANFVFARHPAHDASAIAAKLKEREIF VRHFRLPRIDQHLRITVGTDAECDALVAALRELLA
Sequences:
>Translated_355_residues MSRYWSDVVQQLVPYVPGEQPALAHPVKLNTNENPYPPSPRVVAAIARELGETGDTLRRYPDPVARALRETVAAHHRIQP EQVFVGNGSDEVLAHAFQALLKHDRPLRFPDITYSFYPTYARLYGVETTVVPLADDFSIRVDDYLDDAGGVLFPNPNAPT GRALPLADVERIAAANPSSVVVIDEAYVDFGAQSAITLIDRHPNLLVVHTTSKARSLAGMRVGFAFGDAALIDALNRVKD SFNSYPLDRLAQVAAQAAYEDTDYFNATCRRVIDSRARLTHALDALGFEIVPSAANFVFARHPAHDASAIAAKLKEREIF VRHFRLPRIDQHLRITVGTDAECDALVAALRELLA >Mature_354_residues SRYWSDVVQQLVPYVPGEQPALAHPVKLNTNENPYPPSPRVVAAIARELGETGDTLRRYPDPVARALRETVAAHHRIQPE QVFVGNGSDEVLAHAFQALLKHDRPLRFPDITYSFYPTYARLYGVETTVVPLADDFSIRVDDYLDDAGGVLFPNPNAPTG RALPLADVERIAAANPSSVVVIDEAYVDFGAQSAITLIDRHPNLLVVHTTSKARSLAGMRVGFAFGDAALIDALNRVKDS FNSYPLDRLAQVAAQAAYEDTDYFNATCRRVIDSRARLTHALDALGFEIVPSAANFVFARHPAHDASAIAAKLKEREIFV RHFRLPRIDQHLRITVGTDAECDALVAALRELLA
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788332, Length=355, Percent_Identity=31.2676056338028, Blast_Score=132, Evalue=5e-32, Organism=Escherichia coli, GI1788722, Length=242, Percent_Identity=28.9256198347107, Blast_Score=67, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6322075, Length=363, Percent_Identity=28.3746556473829, Blast_Score=108, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.9 [H]
Molecular weight: Translated: 39097; Mature: 38965
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRYWSDVVQQLVPYVPGEQPALAHPVKLNTNENPYPPSPRVVAAIARELGETGDTLRRY CCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHC PDPVARALRETVAAHHRIQPEQVFVGNGSDEVLAHAFQALLKHDRPLRFPDITYSFYPTY CCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCEECCHHH ARLYGVETTVVPLADDFSIRVDDYLDDAGGVLFPNPNAPTGRALPLADVERIAAANPSSV HHHHCCCEEEEEECCCCEEEEHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHCCCCCCE VVIDEAYVDFGAQSAITLIDRHPNLLVVHTTSKARSLAGMRVGFAFGDAALIDALNRVKD EEEEHHHHCCCCCHHEEEEECCCCEEEEEECHHHHHHHHHEEEHHCCHHHHHHHHHHHHH SFNSYPLDRLAQVAAQAAYEDTDYFNATCRRVIDSRARLTHALDALGFEIVPSAANFVFA HHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCEEEE RHPAHDASAIAAKLKEREIFVRHFRLPRIDQHLRITVGTDAECDALVAALRELLA ECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHC >Mature Secondary Structure SRYWSDVVQQLVPYVPGEQPALAHPVKLNTNENPYPPSPRVVAAIARELGETGDTLRRY CHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHC PDPVARALRETVAAHHRIQPEQVFVGNGSDEVLAHAFQALLKHDRPLRFPDITYSFYPTY CCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCEECCHHH ARLYGVETTVVPLADDFSIRVDDYLDDAGGVLFPNPNAPTGRALPLADVERIAAANPSSV HHHHCCCEEEEEECCCCEEEEHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHCCCCCCE VVIDEAYVDFGAQSAITLIDRHPNLLVVHTTSKARSLAGMRVGFAFGDAALIDALNRVKD EEEEHHHHCCCCCHHEEEEECCCCEEEEEECHHHHHHHHHEEEHHCCHHHHHHHHHHHHH SFNSYPLDRLAQVAAQAAYEDTDYFNATCRRVIDSRARLTHALDALGFEIVPSAANFVFA HHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCEEEE RHPAHDASAIAAKLKEREIFVRHFRLPRIDQHLRITVGTDAECDALVAALRELLA ECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA