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The map label for this gene is ftsY [H]

Identifier: 116690829

GI number: 116690829

Start: 3104388

End: 3105554

Strand: Direct

Name: ftsY [H]

Synonym: Bcen2424_2809

Alternate gene names: 116690829

Gene position: 3104388-3105554 (Clockwise)

Preceding gene: 116690825

Following gene: 116690831

Centisome position: 89.11

GC content: 67.87

Gene sequence:

>1167_bases
ATGTTCAGTTTCTTCAAACGATTCAAGAAAACGCAGGAGCCCGATCCGGCGGAATCGCAATCGGCCGACGCGCAGCAAGC
GGACGAAGCGTCCGACGCGGCCGAGGCTGCGCCCGTGCTCGACGCGCCGCCCGCGGCCGACGTGCCGCCGGCGAGCGCGC
AACCGGCTGCGCCGGCCGTCGTGATGACGGTCACGCCGACCAACGACGGCCGCGACGAAGTCGTCGAGACGGTCGAGATC
GTCCCGCCGCCGCTGCAGGACGCCTCGGCGAAGAAGTCGTGGCTCGCACGCCTGAAAACGGGGCTCGCGAAGACGGGTTC
GAGCATCACCGGCGTGTTCGTCAATACGAAAATCGACGAGGATCTGTACGAGGAACTCGAAACCGCGCTGCTGATGTCCG
ACGCGGGCGTCGACGCGACCGAATACCTGCTCGACGCGCTGCGCGAGAAGGTGCGCGCGGGCCGGCTGACCGATCCGCAG
CAGGTGAAGGATGCACTGCACGACCTGCTCGTCGAGCTGCTGACGCCGCTCGAGAAATCGCTGATGCTCGGCCGCGCGCA
GCCGCTCGTGATGATGATCGCCGGCGTGAACGGCGCGGGCAAGACGACCAGCATCGGCAAGCTCGCGAAGCATCTGCAGA
GCTTCGACCAGTCGGTGCTGCTGGCCGCCGGCGACACGTTCCGCGCGGCCGCGCGCGAACAGCTGGCGGTCTGGGGCGAG
CGCAACAACGTGACGGTCGTGCAGCAGGAAAGCGGCGATCCGGCCGCGGTGATCTTCGACGCGGTCAGCGCCGCGCGCGC
GCGCAAGATCGACGTGATGATGGCCGATACGGCCGGCCGCCTGCCGACGCAACTCCACCTGATGGAAGAGCTGAAGAAGG
TGAAGCGCGTGATCGCGAAGGCGCACGACGGCGCGCCGCACGAGGTACTGCTGGTGATCGACGCGAACACCGGCCAAAAC
GCGCTCACGCAGGTGAAGGCATTCGACGACGCGCTGGGCCTGACCGGCCTGATCGTGACGAAGCTCGACGGCACCGCGAA
AGGCGGGATTCTCGCCGCGATCGCGCGGCAACGGCCGGTGCCCGTCTACTTCATCGGCGTCGGCGAGAAGGTCGAGGACC
TGCAGCCGTTCAGCGCGGTGGAATTCGCGGACGCGCTGCTCGGCTGA

Upstream 100 bases:

>100_bases
CACGGTTTCGGCCGCCGTGCGCCGCGCCCGCGCGAACGCAGAACGGCCCATCCGGCGCCCCGCTCCCGGCGGCGGCCCAC
CCTCTTCCCGACGTCAGACC

Downstream 100 bases:

>100_bases
ACGCCGCCGGCCCGCCTCGCACAGGGCGCCTTCGGGCGCCCTTTTTCATGCGCGCCCGATCCGGCCCGCCCGCCACCGGC
CGCTGCGCGCATTCCGCGCT

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MFSFFKRFKKTQEPDPAESQSADAQQADEASDAAEAAPVLDAPPAADVPPASAQPAAPAVVMTVTPTNDGRDEVVETVEI
VPPPLQDASAKKSWLARLKTGLAKTGSSITGVFVNTKIDEDLYEELETALLMSDAGVDATEYLLDALREKVRAGRLTDPQ
QVKDALHDLLVELLTPLEKSLMLGRAQPLVMMIAGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAVWGE
RNNVTVVQQESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVIAKAHDGAPHEVLLVIDANTGQN
ALTQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAVEFADALLG

Sequences:

>Translated_388_residues
MFSFFKRFKKTQEPDPAESQSADAQQADEASDAAEAAPVLDAPPAADVPPASAQPAAPAVVMTVTPTNDGRDEVVETVEI
VPPPLQDASAKKSWLARLKTGLAKTGSSITGVFVNTKIDEDLYEELETALLMSDAGVDATEYLLDALREKVRAGRLTDPQ
QVKDALHDLLVELLTPLEKSLMLGRAQPLVMMIAGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAVWGE
RNNVTVVQQESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVIAKAHDGAPHEVLLVIDANTGQN
ALTQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAVEFADALLG
>Mature_388_residues
MFSFFKRFKKTQEPDPAESQSADAQQADEASDAAEAAPVLDAPPAADVPPASAQPAAPAVVMTVTPTNDGRDEVVETVEI
VPPPLQDASAKKSWLARLKTGLAKTGSSITGVFVNTKIDEDLYEELETALLMSDAGVDATEYLLDALREKVRAGRLTDPQ
QVKDALHDLLVELLTPLEKSLMLGRAQPLVMMIAGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAVWGE
RNNVTVVQQESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVIAKAHDGAPHEVLLVIDANTGQN
ALTQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAVEFADALLG

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=285, Percent_Identity=31.9298245614035, Blast_Score=131, Evalue=9e-31,
Organism=Homo sapiens, GI226371618, Length=238, Percent_Identity=33.1932773109244, Blast_Score=122, Evalue=4e-28,
Organism=Homo sapiens, GI23308697, Length=288, Percent_Identity=31.9444444444444, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI295424842, Length=288, Percent_Identity=31.9444444444444, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI89061728, Length=137, Percent_Identity=36.4963503649635, Blast_Score=88, Evalue=1e-17,
Organism=Escherichia coli, GI1789874, Length=307, Percent_Identity=50.814332247557, Blast_Score=291, Evalue=5e-80,
Organism=Escherichia coli, GI1788963, Length=294, Percent_Identity=35.0340136054422, Blast_Score=147, Evalue=8e-37,
Organism=Caenorhabditis elegans, GI17539958, Length=298, Percent_Identity=27.8523489932886, Blast_Score=115, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI193206261, Length=299, Percent_Identity=30.4347826086957, Blast_Score=109, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6325345, Length=274, Percent_Identity=31.7518248175182, Blast_Score=127, Evalue=2e-30,
Organism=Saccharomyces cerevisiae, GI6320498, Length=245, Percent_Identity=29.3877551020408, Blast_Score=95, Evalue=2e-20,
Organism=Drosophila melanogaster, GI17647949, Length=285, Percent_Identity=32.280701754386, Blast_Score=135, Evalue=7e-32,
Organism=Drosophila melanogaster, GI24641198, Length=260, Percent_Identity=30.7692307692308, Blast_Score=100, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 41200; Mature: 41200

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSFFKRFKKTQEPDPAESQSADAQQADEASDAAEAAPVLDAPPAADVPPASAQPAAPAV
CCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEE
VMTVTPTNDGRDEVVETVEIVPPPLQDASAKKSWLARLKTGLAKTGSSITGVFVNTKIDE
EEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCH
DLYEELETALLMSDAGVDATEYLLDALREKVRAGRLTDPQQVKDALHDLLVELLTPLEKS
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LMLGRAQPLVMMIAGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAVWGE
HHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCC
RNNVTVVQQESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVIAK
CCCEEEEEECCCCCHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
AHDGAPHEVLLVIDANTGQNALTQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPV
HCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCC
PVYFIGVGEKVEDLQPFSAVEFADALLG
CEEEEECCCCHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure
MFSFFKRFKKTQEPDPAESQSADAQQADEASDAAEAAPVLDAPPAADVPPASAQPAAPAV
CCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEE
VMTVTPTNDGRDEVVETVEIVPPPLQDASAKKSWLARLKTGLAKTGSSITGVFVNTKIDE
EEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCH
DLYEELETALLMSDAGVDATEYLLDALREKVRAGRLTDPQQVKDALHDLLVELLTPLEKS
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LMLGRAQPLVMMIAGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAVWGE
HHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCC
RNNVTVVQQESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVIAK
CCCEEEEEECCCCCHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
AHDGAPHEVLLVIDANTGQNALTQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPV
HCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCC
PVYFIGVGEKVEDLQPFSAVEFADALLG
CEEEEECCCCHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]