| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is ilvA [H]
Identifier: 116690756
GI number: 116690756
Start: 3033300
End: 3034823
Strand: Direct
Name: ilvA [H]
Synonym: Bcen2424_2736
Alternate gene names: 116690756
Gene position: 3033300-3034823 (Clockwise)
Preceding gene: 116690737
Following gene: 116690757
Centisome position: 87.07
GC content: 66.93
Gene sequence:
>1524_bases ATGGCATCCCACGATTACCTGAAGAAAATCCTCACCGCGCGCGTCTACGACGTCGCGATCGAGACGGAACTCGAACCGGC CCGCAACCTGTCGGCCCGGCTGCGCAACGCCGTTTACCTGAAGCGCGAGGACAACCAGCCGGTGTTCTCGTTCAAGCTGC GCGGCGCATACAACAAGATGGCGCACATTCCGGTGGACGCGCTCGCGCGCGGCGTGATTACCGCGTCGGCCGGCAACCAC GCGCAGGGCGTTGCGTTCTCGGCGGCCCGGATGGGCGTCAAGGCCGTGATCGTCGTACCGGTCACGACGCCGCAGGTGAA GGTCGACGCGGTGCGCGCGCACGGCGGCCCGAGCGTCGAGGTGATCCAGGCGGGCGAATCGTACAGCGATGCGTACGCGC ACGCGGTCAAGGTCCAGCAGGAGCGCGACCTCACGTTCGTCCACCCGTTCGACGATCCGTACGTGATCGCCGGCCAGGGC ACGATCGCGATGGAAATCCTGCGCCAGCACCAGGGCCCGATCCACGCGGTCTTCGTGCCGATCGGCGGCGGCGGACTCGC GTCCGGCGTCGCCGCGTACGTGAAGGCGGTGCGCCCGGAGATCAAGGTGATCGGCGTGCAGGCCGAGGATTCGTGCGCGA TGGCGCAGTCGCTGGACGCGGGCGAGCGCATCGAGCTGAGCGAAGTCGGCCTGTTCGCGGACGGCACCGCGGTAAAGCTC GTCGGCGAGGAAACCTTCCGGCTGTGCCGCGAATTCCTGGACGGCGTCGTGACCGTCAACACCGACGCACTGTGCGCGGC GATCAAGGACGTGTTCCAGGACACGCGCAGCGTGCTCGAGCCGTCCGGCGCGCTCGCGGTCGCGGGTGCGAAGCTGTATG CGGAACGCGAAGGCATCGAGAACCAGACGCTCGTCGCGGTCACGTCCGGCGCGAACATGAATTTCGACCGGATGCGCTTC GTCGCCGAGCGCGCCGAGGTCGGCGAAGCGCGCGAAGCCGTGTTCGCGGTCACGATTCCCGAGGAACGCGGCAGCTTCAA GCGCTTCTGCTCGCTCGTCGGCGATCGCAACGTCACCGAGTTCAACTACCGGATCGCCGACGAGAAGTCCGCGCACATCT TCGTCGGCGTGCAGATCAAGCGCCGCGGCGAATCGGCGGAGATCGCCGCGAACTTCGAGTCGCACGGCTTCAAGAGCGTC GACCTGACGCACGACGAGCTGTCGAAGGAACACATCCGCTACATGGTCGGCGGCCGCTCGCCGCTCGCGCTCGACGAGCG CCTGTTCCGCTTCGAATTCCCGGAACGGCCGGGCGCGCTGATGAAGTTCCTGTCGTCGATGGCGCCGGACTGGAACATCA GCCTGTTCCACTACCGCAACCAGGGCGCGGACTACAGCTCGATCCTCGTCGGGCTGCAGGTGCCGCAGGCCGATCGCGCC GAATTCGAACGCTTCCTCGCGGCACTCGGCTACCCGTATGTCGAAGAGAGCGCCAACCCGGCTTACCGCCTCTTCCTGTC GTAA
Upstream 100 bases:
>100_bases GCTCACAGCCGCCCGCCCGGCATGCCGCTTGCGTGCGGGCGGACCCTTGGCGCTATCATTGACCCTTTACCGTCTGCATC CGCACTGCCCGCGAGCGCCC
Downstream 100 bases:
>100_bases AGGCTTCGTGCAATGAATCCCGAACATTCCCCGCTCGGCAAGGCCACCGTCTACGCGGCGCAGTACGACGCGTCGCTGCT GTTCCCGATCCCGCGCGCCG
Product: threonine dehydratase
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 507; Mature: 506
Protein sequence:
>507_residues MASHDYLKKILTARVYDVAIETELEPARNLSARLRNAVYLKREDNQPVFSFKLRGAYNKMAHIPVDALARGVITASAGNH AQGVAFSAARMGVKAVIVVPVTTPQVKVDAVRAHGGPSVEVIQAGESYSDAYAHAVKVQQERDLTFVHPFDDPYVIAGQG TIAMEILRQHQGPIHAVFVPIGGGGLASGVAAYVKAVRPEIKVIGVQAEDSCAMAQSLDAGERIELSEVGLFADGTAVKL VGEETFRLCREFLDGVVTVNTDALCAAIKDVFQDTRSVLEPSGALAVAGAKLYAEREGIENQTLVAVTSGANMNFDRMRF VAERAEVGEAREAVFAVTIPEERGSFKRFCSLVGDRNVTEFNYRIADEKSAHIFVGVQIKRRGESAEIAANFESHGFKSV DLTHDELSKEHIRYMVGGRSPLALDERLFRFEFPERPGALMKFLSSMAPDWNISLFHYRNQGADYSSILVGLQVPQADRA EFERFLAALGYPYVEESANPAYRLFLS
Sequences:
>Translated_507_residues MASHDYLKKILTARVYDVAIETELEPARNLSARLRNAVYLKREDNQPVFSFKLRGAYNKMAHIPVDALARGVITASAGNH AQGVAFSAARMGVKAVIVVPVTTPQVKVDAVRAHGGPSVEVIQAGESYSDAYAHAVKVQQERDLTFVHPFDDPYVIAGQG TIAMEILRQHQGPIHAVFVPIGGGGLASGVAAYVKAVRPEIKVIGVQAEDSCAMAQSLDAGERIELSEVGLFADGTAVKL VGEETFRLCREFLDGVVTVNTDALCAAIKDVFQDTRSVLEPSGALAVAGAKLYAEREGIENQTLVAVTSGANMNFDRMRF VAERAEVGEAREAVFAVTIPEERGSFKRFCSLVGDRNVTEFNYRIADEKSAHIFVGVQIKRRGESAEIAANFESHGFKSV DLTHDELSKEHIRYMVGGRSPLALDERLFRFEFPERPGALMKFLSSMAPDWNISLFHYRNQGADYSSILVGLQVPQADRA EFERFLAALGYPYVEESANPAYRLFLS >Mature_506_residues ASHDYLKKILTARVYDVAIETELEPARNLSARLRNAVYLKREDNQPVFSFKLRGAYNKMAHIPVDALARGVITASAGNHA QGVAFSAARMGVKAVIVVPVTTPQVKVDAVRAHGGPSVEVIQAGESYSDAYAHAVKVQQERDLTFVHPFDDPYVIAGQGT IAMEILRQHQGPIHAVFVPIGGGGLASGVAAYVKAVRPEIKVIGVQAEDSCAMAQSLDAGERIELSEVGLFADGTAVKLV GEETFRLCREFLDGVVTVNTDALCAAIKDVFQDTRSVLEPSGALAVAGAKLYAEREGIENQTLVAVTSGANMNFDRMRFV AERAEVGEAREAVFAVTIPEERGSFKRFCSLVGDRNVTEFNYRIADEKSAHIFVGVQIKRRGESAEIAANFESHGFKSVD LTHDELSKEHIRYMVGGRSPLALDERLFRFEFPERPGALMKFLSSMAPDWNISLFHYRNQGADYSSILVGLQVPQADRAE FERFLAALGYPYVEESANPAYRLFLS
Specific function: Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine, followed by rehydration and liberation of ammonia [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=298, Percent_Identity=33.8926174496644, Blast_Score=143, Evalue=4e-34, Organism=Homo sapiens, GI33469958, Length=318, Percent_Identity=26.7295597484277, Blast_Score=68, Evalue=2e-11, Organism=Escherichia coli, GI1790207, Length=504, Percent_Identity=53.968253968254, Blast_Score=520, Evalue=1e-149, Organism=Escherichia coli, GI1789505, Length=311, Percent_Identity=36.3344051446945, Blast_Score=166, Evalue=3e-42, Organism=Caenorhabditis elegans, GI71991565, Length=325, Percent_Identity=29.5384615384615, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI17537387, Length=342, Percent_Identity=30.9941520467836, Blast_Score=131, Evalue=7e-31, Organism=Caenorhabditis elegans, GI17508781, Length=292, Percent_Identity=27.7397260273973, Blast_Score=116, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6320930, Length=517, Percent_Identity=47.5822050290135, Blast_Score=461, Evalue=1e-131, Organism=Saccharomyces cerevisiae, GI6322631, Length=304, Percent_Identity=33.5526315789474, Blast_Score=144, Evalue=3e-35, Organism=Saccharomyces cerevisiae, GI6319788, Length=269, Percent_Identity=25.2788104089219, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI21355833, Length=316, Percent_Identity=30.0632911392405, Blast_Score=118, Evalue=7e-27, Organism=Drosophila melanogaster, GI24645328, Length=255, Percent_Identity=29.0196078431373, Blast_Score=81, Evalue=2e-15,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR005787 - InterPro: IPR001721 [H]
Pfam domain/function: PF00291 PALP; PF00585 Thr_dehydrat_C [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 55477; Mature: 55345
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASHDYLKKILTARVYDVAIETELEPARNLSARLRNAVYLKREDNQPVFSFKLRGAYNKM CCCHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHEEEEEECCCCCEEEEEECCCCCCH AHIPVDALARGVITASAGNHAQGVAFSAARMGVKAVIVVPVTTPQVKVDAVRAHGGPSVE HCCCHHHHHCCEEEECCCCCCCCEEEHHHHCCEEEEEEEECCCCCEEEEEEECCCCCCEE VIQAGESYSDAYAHAVKVQQERDLTFVHPFDDPYVIAGQGTIAMEILRQHQGPIHAVFVP EEECCCCCHHHHHHHHEEECCCCEEEECCCCCCEEEECCCHHHHHHHHHCCCCEEEEEEE IGGGGLASGVAAYVKAVRPEIKVIGVQAEDSCAMAQSLDAGERIELSEVGLFADGTAVKL ECCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHCCCCCEEEHHHCCEEECCCEEEE VGEETFRLCREFLDGVVTVNTDALCAAIKDVFQDTRSVLEPSGALAVAGAKLYAEREGIE ECHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHCCCC NQTLVAVTSGANMNFDRMRFVAERAEVGEAREAVFAVTIPEERGSFKRFCSLVGDRNVTE CCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECHHCCCHHHHHHHHCCCCEEE FNYRIADEKSAHIFVGVQIKRRGESAEIAANFESHGFKSVDLTHDELSKEHIRYMVGGRS EEEEECCCCCCEEEEEEEEEECCCCCEEEECHHHCCCEEECCCHHHHHHHHHHEEECCCC PLALDERLFRFEFPERPGALMKFLSSMAPDWNISLFHYRNQGADYSSILVGLQVPQADRA CCHHHHHHHEECCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCHHHEEEEEECCCCCHH EFERFLAALGYPYVEESANPAYRLFLS HHHHHHHHHCCCHHHCCCCCEEEEEEC >Mature Secondary Structure ASHDYLKKILTARVYDVAIETELEPARNLSARLRNAVYLKREDNQPVFSFKLRGAYNKM CCHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHEEEEEECCCCCEEEEEECCCCCCH AHIPVDALARGVITASAGNHAQGVAFSAARMGVKAVIVVPVTTPQVKVDAVRAHGGPSVE HCCCHHHHHCCEEEECCCCCCCCEEEHHHHCCEEEEEEEECCCCCEEEEEEECCCCCCEE VIQAGESYSDAYAHAVKVQQERDLTFVHPFDDPYVIAGQGTIAMEILRQHQGPIHAVFVP EEECCCCCHHHHHHHHEEECCCCEEEECCCCCCEEEECCCHHHHHHHHHCCCCEEEEEEE IGGGGLASGVAAYVKAVRPEIKVIGVQAEDSCAMAQSLDAGERIELSEVGLFADGTAVKL ECCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHCCCCCEEEHHHCCEEECCCEEEE VGEETFRLCREFLDGVVTVNTDALCAAIKDVFQDTRSVLEPSGALAVAGAKLYAEREGIE ECHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHCCCC NQTLVAVTSGANMNFDRMRFVAERAEVGEAREAVFAVTIPEERGSFKRFCSLVGDRNVTE CCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECHHCCCHHHHHHHHCCCCEEE FNYRIADEKSAHIFVGVQIKRRGESAEIAANFESHGFKSVDLTHDELSKEHIRYMVGGRS EEEEECCCCCCEEEEEEEEEECCCCCEEEECHHHCCCEEECCCHHHHHHHHHHEEECCCC PLALDERLFRFEFPERPGALMKFLSSMAPDWNISLFHYRNQGADYSSILVGLQVPQADRA CCHHHHHHHEECCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCHHHEEEEEECCCCCHH EFERFLAALGYPYVEESANPAYRLFLS HHHHHHHHHCCCHHHCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA