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The map label for this gene is fdhD [H]

Identifier: 116690737

GI number: 116690737

Start: 3009715

End: 3010569

Strand: Direct

Name: fdhD [H]

Synonym: Bcen2424_2717

Alternate gene names: 116690737

Gene position: 3009715-3010569 (Clockwise)

Preceding gene: 116690735

Following gene: 116690756

Centisome position: 86.39

GC content: 70.18

Gene sequence:

>855_bases
GTGCTCGTGAATCCGACCCAATCAGACGAACTGCACGACGCATTGCGCGACGAACCGCGCGGCGCGATCGAGCTGCCCGT
GAGCCGCACGCGCGGCGGCGCGGTCGAGACCGCGCACGACTTCGTCGGCCAGGAATGGCCGGTCGCACTCGTCTTCAACG
GCATCTCGCACGCGGTGATGATGTGTACGCCGTGCGACCTCGAAGCGTTCGCGGTCGGCTTCGCGATCTCGGAAGGCATC
GTCGCGCGCGGCAGCGACATCAAGGACATCGAGGTGATCCTGCACGCCGACGCGCCGCTGCCGCATGCGGAAGTCCATCT
GGAAGTGGTCCAGCAGGCGTTCGCCGCGCTGAAGGACCGGCGCCGCGCGCTCGCGGGGCGCACGGGCTGCGGCGTCTGCG
GCATCGAGAGCATCGACCTGCTCGACCTCGCACCCGAACGCGTGCCCGATACCGGCTTTCTCGCGCGCCTCGCGCCCGAC
GCGCTGGCGCGCGCCGCGCATGCGCTGCCGGCGCATCAGGCGCTCACGAAACTGACCGGCGGCCTGCATGCGGCCGCGTG
GTGCGACGCAACAGGCGCGATTCGCGCGGCATTCGAGGATGTCGGCCGCCACAACGCGCTCGACAAGCTGATCGGCTCCC
TCGTGCTGTCGCGCGCCGATACCACCGACGGCTTCGTGTTCCTGTCGAGCCGCGCGAGCTACGAGCTCGTGCGCAAGGCG
GCGCGGGTCGGCATCCCGCTGGTCGCGACCATCTCCGCGCCGTCGTCGCTCGCGATCGAAATCGCGAAGGCGGCCGGCTT
GCGGCTCGTCAGCTTCTGCCGCGAAACCGGCCACGTCGATTACGGCACGGCCTGA

Upstream 100 bases:

>100_bases
GTGGCGGATGCCGGCGCGGCCGGCTTGCCTGGGGTATTTTAGAACCTCTGCGCGCGGGCGGCGGTACGATCGTCGCCGGC
CGCGCTTCGAATCAACGGGA

Downstream 100 bases:

>100_bases
TCCAGACCGTGCGCGTGCGCCGACGGTCTCCCGCCGGCGCGCCTCAGTCCGTCAGTCGAACTGACGGAAATCCGGCTTGC
GCTTCTCGAAGAACGCGGTC

Product: formate dehydrogenase family accessory protein FdhD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MLVNPTQSDELHDALRDEPRGAIELPVSRTRGGAVETAHDFVGQEWPVALVFNGISHAVMMCTPCDLEAFAVGFAISEGI
VARGSDIKDIEVILHADAPLPHAEVHLEVVQQAFAALKDRRRALAGRTGCGVCGIESIDLLDLAPERVPDTGFLARLAPD
ALARAAHALPAHQALTKLTGGLHAAAWCDATGAIRAAFEDVGRHNALDKLIGSLVLSRADTTDGFVFLSSRASYELVRKA
ARVGIPLVATISAPSSLAIEIAKAAGLRLVSFCRETGHVDYGTA

Sequences:

>Translated_284_residues
MLVNPTQSDELHDALRDEPRGAIELPVSRTRGGAVETAHDFVGQEWPVALVFNGISHAVMMCTPCDLEAFAVGFAISEGI
VARGSDIKDIEVILHADAPLPHAEVHLEVVQQAFAALKDRRRALAGRTGCGVCGIESIDLLDLAPERVPDTGFLARLAPD
ALARAAHALPAHQALTKLTGGLHAAAWCDATGAIRAAFEDVGRHNALDKLIGSLVLSRADTTDGFVFLSSRASYELVRKA
ARVGIPLVATISAPSSLAIEIAKAAGLRLVSFCRETGHVDYGTA
>Mature_284_residues
MLVNPTQSDELHDALRDEPRGAIELPVSRTRGGAVETAHDFVGQEWPVALVFNGISHAVMMCTPCDLEAFAVGFAISEGI
VARGSDIKDIEVILHADAPLPHAEVHLEVVQQAFAALKDRRRALAGRTGCGVCGIESIDLLDLAPERVPDTGFLARLAPD
ALARAAHALPAHQALTKLTGGLHAAAWCDATGAIRAAFEDVGRHNALDKLIGSLVLSRADTTDGFVFLSSRASYELVRKA
ARVGIPLVATISAPSSLAIEIAKAAGLRLVSFCRETGHVDYGTA

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=235, Percent_Identity=44.2553191489362, Blast_Score=189, Evalue=2e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 29961; Mature: 29961

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVNPTQSDELHDALRDEPRGAIELPVSRTRGGAVETAHDFVGQEWPVALVFNGISHAVM
CCCCCCCCHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCCEEEECCHHCEEE
MCTPCDLEAFAVGFAISEGIVARGSDIKDIEVILHADAPLPHAEVHLEVVQQAFAALKDR
EECCCCHHHHHHHHHHHCCCEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
RRALAGRTGCGVCGIESIDLLDLAPERVPDTGFLARLAPDALARAAHALPAHQALTKLTG
HHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHCHHHHHHHHHHCHHHHHHHHHHC
GLHAAAWCDATGAIRAAFEDVGRHNALDKLIGSLVLSRADTTDGFVFLSSRASYELVRKA
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHH
ARVGIPLVATISAPSSLAIEIAKAAGLRLVSFCRETGHVDYGTA
HHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLVNPTQSDELHDALRDEPRGAIELPVSRTRGGAVETAHDFVGQEWPVALVFNGISHAVM
CCCCCCCCHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCCEEEECCHHCEEE
MCTPCDLEAFAVGFAISEGIVARGSDIKDIEVILHADAPLPHAEVHLEVVQQAFAALKDR
EECCCCHHHHHHHHHHHCCCEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
RRALAGRTGCGVCGIESIDLLDLAPERVPDTGFLARLAPDALARAAHALPAHQALTKLTG
HHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHCHHHHHHHHHHCHHHHHHHHHHC
GLHAAAWCDATGAIRAAFEDVGRHNALDKLIGSLVLSRADTTDGFVFLSSRASYELVRKA
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHH
ARVGIPLVATISAPSSLAIEIAKAAGLRLVSFCRETGHVDYGTA
HHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA