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The map label for this gene is ycjP [C]

Identifier: 116690613

GI number: 116690613

Start: 2870850

End: 2871701

Strand: Reverse

Name: ycjP [C]

Synonym: Bcen2424_2593

Alternate gene names: 116690613

Gene position: 2871701-2870850 (Counterclockwise)

Preceding gene: 116690614

Following gene: 116690612

Centisome position: 82.43

GC content: 64.44

Gene sequence:

>852_bases
ATGAGCGACCTGACCTTGGCAGGCCGGCGCACGCCGGCCGTGTTCGATCTCGTGCGGCGCGCGCTGCCCGGTACGCTCGC
GTGGCTGATCGCGCTCCTGCTGTTCTTCCCGATCTTCTGGATGGCGATCACCGCGTTCAAGACCGAACAGCAGGCGTACG
CGTCGACGCTGTTCTTCATGCCGACGCTGGACAGCTTCCGCGAGGTGTTCGCGCGCAGCAACTACTTCGGGTTCGCGTGG
AATTCGATCCTGATCTCGGCCGGCGTCACGGTGATCTCGCTGCTGTTCGCGGTGCCGGCCGCGTACGCGATGGCGTTCTT
CCCGAACCACCGCACGCAGAAGGTGCTGCTGTGGATGCTGTCGACCAAGATGATGCCGTCAGTCGGCGTGCTGGTGCCGA
TCTACCTGCTGTGGAAGAACGCGGGGCTGCTCGATACCGTGTCGGGGCTCGTGATCGTCTATACGCTGATCAACCTGCCG
ATCGCGGTGTGGATGACCTTCACGTACTTCAACGAGATCCCGAAGGACATCCTGGAAGCCGGGCGCATCGACGGCGCGTC
GACGTGGCAGGAGATCGTCTACCTGCTGATGCCGATGGCGCTACCGGGGCTCGCGTCCACCGCGCTGCTGCTCGTGATCC
TGTCGTGGAACGAGGCGTTCTGGAGCATCAACCTGTCGAGCTCGAACGCGGCGCCGTTGACGGTGTTCATCGCGTCGTAC
TCGAGCCCCGAAGGGCTGTTCTGGGCGAAGCTGTCCGCGGCTTCGCTGCTCGCGGTCGCGCCGATCCTGATCGTCGGCTG
GCTGTCGCAGAAGCAGCTCGTGCGCGGGCTCACGTTCGGGGCGGTTAAATGA

Upstream 100 bases:

>100_bases
TCGCATCCGCGGGCGGCATCATCGCCGTCGTGGTCGCGAACGTCGTGTCGTTCTTCCTCGTGCGGATGCTCGCGCGCAAC
CTGAAGGGAGAGTACGAAAA

Downstream 100 bases:

>100_bases
GCGGCGCAAGCAAAGGCGCGGCCGGTCACGGCGTGAACGTGCTGATCTGCGATTGCGACGGCGTGCTGATCGACAGCGAG
GCCGTGGCCGCCGACGTGAT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MSDLTLAGRRTPAVFDLVRRALPGTLAWLIALLLFFPIFWMAITAFKTEQQAYASTLFFMPTLDSFREVFARSNYFGFAW
NSILISAGVTVISLLFAVPAAYAMAFFPNHRTQKVLLWMLSTKMMPSVGVLVPIYLLWKNAGLLDTVSGLVIVYTLINLP
IAVWMTFTYFNEIPKDILEAGRIDGASTWQEIVYLLMPMALPGLASTALLLVILSWNEAFWSINLSSSNAAPLTVFIASY
SSPEGLFWAKLSAASLLAVAPILIVGWLSQKQLVRGLTFGAVK

Sequences:

>Translated_283_residues
MSDLTLAGRRTPAVFDLVRRALPGTLAWLIALLLFFPIFWMAITAFKTEQQAYASTLFFMPTLDSFREVFARSNYFGFAW
NSILISAGVTVISLLFAVPAAYAMAFFPNHRTQKVLLWMLSTKMMPSVGVLVPIYLLWKNAGLLDTVSGLVIVYTLINLP
IAVWMTFTYFNEIPKDILEAGRIDGASTWQEIVYLLMPMALPGLASTALLLVILSWNEAFWSINLSSSNAAPLTVFIASY
SSPEGLFWAKLSAASLLAVAPILIVGWLSQKQLVRGLTFGAVK
>Mature_282_residues
SDLTLAGRRTPAVFDLVRRALPGTLAWLIALLLFFPIFWMAITAFKTEQQAYASTLFFMPTLDSFREVFARSNYFGFAWN
SILISAGVTVISLLFAVPAAYAMAFFPNHRTQKVLLWMLSTKMMPSVGVLVPIYLLWKNAGLLDTVSGLVIVYTLINLPI
AVWMTFTYFNEIPKDILEAGRIDGASTWQEIVYLLMPMALPGLASTALLLVILSWNEAFWSINLSSSNAAPLTVFIASYS
SPEGLFWAKLSAASLLAVAPILIVGWLSQKQLVRGLTFGAVK

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=265, Percent_Identity=29.811320754717, Blast_Score=94, Evalue=9e-21,
Organism=Escherichia coli, GI1790464, Length=214, Percent_Identity=34.1121495327103, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1789860, Length=261, Percent_Identity=21.8390804597701, Blast_Score=61, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31291; Mature: 31160

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLTLAGRRTPAVFDLVRRALPGTLAWLIALLLFFPIFWMAITAFKTEQQAYASTLFFM
CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PTLDSFREVFARSNYFGFAWNSILISAGVTVISLLFAVPAAYAMAFFPNHRTQKVLLWML
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
STKMMPSVGVLVPIYLLWKNAGLLDTVSGLVIVYTLINLPIAVWMTFTYFNEIPKDILEA
HHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRIDGASTWQEIVYLLMPMALPGLASTALLLVILSWNEAFWSINLSSSNAAPLTVFIASY
CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEEC
SSPEGLFWAKLSAASLLAVAPILIVGWLSQKQLVRGLTFGAVK
CCCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
SDLTLAGRRTPAVFDLVRRALPGTLAWLIALLLFFPIFWMAITAFKTEQQAYASTLFFM
CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PTLDSFREVFARSNYFGFAWNSILISAGVTVISLLFAVPAAYAMAFFPNHRTQKVLLWML
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
STKMMPSVGVLVPIYLLWKNAGLLDTVSGLVIVYTLINLPIAVWMTFTYFNEIPKDILEA
HHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRIDGASTWQEIVYLLMPMALPGLASTALLLVILSWNEAFWSINLSSSNAAPLTVFIASY
CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEEC
SSPEGLFWAKLSAASLLAVAPILIVGWLSQKQLVRGLTFGAVK
CCCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]