| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is yieH [H]
Identifier: 116690612
GI number: 116690612
Start: 2870140
End: 2870853
Strand: Reverse
Name: yieH [H]
Synonym: Bcen2424_2592
Alternate gene names: 116690612
Gene position: 2870853-2870140 (Counterclockwise)
Preceding gene: 116690613
Following gene: 116690611
Centisome position: 82.4
GC content: 73.39
Gene sequence:
>714_bases ATGAGCGGCGCAAGCAAAGGCGCGGCCGGTCACGGCGTGAACGTGCTGATCTGCGATTGCGACGGCGTGCTGATCGACAG CGAGGCCGTGGCCGCCGACGTGATCGTGCGCGAACTCGATGCGCGCTGGCCGGGCGTCGATGCGCGGCCGGCCGTGATGC CGCTGCTCGGGCTGCGCATCGAGCGCGTGCTAGCTGGCGCGAGCGACGCGGTCGGCCGCACGCTGTCGGCCGACGACGTC GACGCGATCCGCCGCGCGGTTGAGGCGGCGGCCGTCAACGCGCCGATGGTCGACGGCATCGATGCGGCGCTGGCCGCGAT CGACCTGACGACGGCGTGCGCGAGCAACAGCTATCGCGCGTACGTCGAAGCGGCGCTCGCGCGCACCGGCCTCGCGCGCT TTTTCGGCGACCGGTTGTTCTGCGCGGATTCGGTCGCGCGGCCGAAGCCGGCGCCCGACGTGTATCTGGCAGCCGCACGC GCGCTCGGCGTGGTGCCCGCGCAATGCCTGGTGGTCGAGGACAGCGTGACCGGCATCACCGCGGCGGCCGCGGCCGGCAT GACCGTGCTCGGCTTCGTCGGCGGCGGGCACGCGTCGGCGGCGCAGATCGACGCGTTGCGCGGCATCGGCGCGCGGCACG TATTCGACGACATGCACGAGCTGCCCGGCTACGTCGCGCGCTGGCAGGCGACGGGCGCGGTGCTGCCGAACTAG
Upstream 100 bases:
>100_bases AGCTGTCCGCGGCTTCGCTGCTCGCGGTCGCGCCGATCCTGATCGTCGGCTGGCTGTCGCAGAAGCAGCTCGTGCGCGGG CTCACGTTCGGGGCGGTTAA
Downstream 100 bases:
>100_bases CAATCAGGAACGAAGGCGCGCCGCTTTCAACGCGGCGCATCACGAACGAACGGAGACAGATCATGGCAAGCGTGCTCCTG CGCAACATCGCGAAGCGCTA
Product: HAD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MSGASKGAAGHGVNVLICDCDGVLIDSEAVAADVIVRELDARWPGVDARPAVMPLLGLRIERVLAGASDAVGRTLSADDV DAIRRAVEAAAVNAPMVDGIDAALAAIDLTTACASNSYRAYVEAALARTGLARFFGDRLFCADSVARPKPAPDVYLAAAR ALGVVPAQCLVVEDSVTGITAAAAAGMTVLGFVGGGHASAAQIDALRGIGARHVFDDMHELPGYVARWQATGAVLPN
Sequences:
>Translated_237_residues MSGASKGAAGHGVNVLICDCDGVLIDSEAVAADVIVRELDARWPGVDARPAVMPLLGLRIERVLAGASDAVGRTLSADDV DAIRRAVEAAAVNAPMVDGIDAALAAIDLTTACASNSYRAYVEAALARTGLARFFGDRLFCADSVARPKPAPDVYLAAAR ALGVVPAQCLVVEDSVTGITAAAAAGMTVLGFVGGGHASAAQIDALRGIGARHVFDDMHELPGYVARWQATGAVLPN >Mature_236_residues SGASKGAAGHGVNVLICDCDGVLIDSEAVAADVIVRELDARWPGVDARPAVMPLLGLRIERVLAGASDAVGRTLSADDVD AIRRAVEAAAVNAPMVDGIDAALAAIDLTTACASNSYRAYVEAALARTGLARFFGDRLFCADSVARPKPAPDVYLAAARA LGVVPAQCLVVEDSVTGITAAAAAGMTVLGFVGGGHASAAQIDALRGIGARHVFDDMHELPGYVARWQATGAVLPN
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates phosphoenolpyruvate and AMP [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Escherichia coli, GI1790151, Length=187, Percent_Identity=26.2032085561497, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1789046, Length=177, Percent_Identity=32.2033898305085, Blast_Score=69, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 24117; Mature: 23985
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGASKGAAGHGVNVLICDCDGVLIDSEAVAADVIVRELDARWPGVDARPAVMPLLGLRI CCCCCCCCCCCCCEEEEECCCCEEECCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH ERVLAGASDAVGRTLSADDVDAIRRAVEAAAVNAPMVDGIDAALAAIDLTTACASNSYRA HHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHH YVEAALARTGLARFFGDRLFCADSVARPKPAPDVYLAAARALGVVPAQCLVVEDSVTGIT HHHHHHHHHHHHHHHCCHHEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCHH AAAAAGMTVLGFVGGGHASAAQIDALRGIGARHVFDDMHELPGYVARWQATGAVLPN HHHHHCCEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHCCCCCCCC >Mature Secondary Structure SGASKGAAGHGVNVLICDCDGVLIDSEAVAADVIVRELDARWPGVDARPAVMPLLGLRI CCCCCCCCCCCCEEEEECCCCEEECCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH ERVLAGASDAVGRTLSADDVDAIRRAVEAAAVNAPMVDGIDAALAAIDLTTACASNSYRA HHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHH YVEAALARTGLARFFGDRLFCADSVARPKPAPDVYLAAARALGVVPAQCLVVEDSVTGIT HHHHHHHHHHHHHHHCCHHEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCHH AAAAAGMTVLGFVGGGHASAAQIDALRGIGARHVFDDMHELPGYVARWQATGAVLPN HHHHHCCEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]