| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690364
Identifier: 116690364
GI number: 116690364
Start: 2605851
End: 2606279
Strand: Direct
Name: 116690364
Synonym: Bcen2424_2344
Alternate gene names: NA
Gene position: 2605851-2606279 (Clockwise)
Preceding gene: 116690363
Following gene: 116690369
Centisome position: 74.8
GC content: 57.81
Gene sequence:
>429_bases TTGACCGCATTGGATAACCTCGTACGCATCGGAAAACTCAAACCCCTTCCGGCGAACCGCGGCGAATTCGAACATCTGCT CGACCTCGCTCGAACCTTGCTCGATACCGTCACAAGCAGTAACGGAATGGCGACGGAGAGCCAGTTCATCCTCGCCTACG ATTCCGCTCACGCCGCGTCACGTGCTGCGTTACGGGCTCACGGATACCGGAGCGACGACCGATATCTGGTCTTTCAGTGT CTCGAACACACGATCGGCTGGCCGACCGAAAAATGGCGCGTGCTCGATACCTGCCATCGCAGGCGCAATGCGGCCGAATA CGAGGGCAACATAGATCTTCCAGCGAGTCTGACCGCCGAGTTGGTTCGGCTCACTGCTGAACTCATTGAAACCGTATCTC TACTCGACCACCTGCTGCCGTCCACCTGA
Upstream 100 bases:
>100_bases ACTCACGAGGAATTTCTCGAACGGAAACGCAAAAGTCATCCGTTCCTCGCTGAAGTGCTGCGCCAACCGAAGCTGATGAT TATCGGAACCGAGGACGACA
Downstream 100 bases:
>100_bases TACTGCTTCGCGGGATACTCTGAATCCAACGAGTTTCAGGCGCGAATCCCGCGCCAAAGCACCAGTTTCTGCTCGAACGA CAGCATCGCGTTCGCCGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MTALDNLVRIGKLKPLPANRGEFEHLLDLARTLLDTVTSSNGMATESQFILAYDSAHAASRAALRAHGYRSDDRYLVFQC LEHTIGWPTEKWRVLDTCHRRRNAAEYEGNIDLPASLTAELVRLTAELIETVSLLDHLLPST
Sequences:
>Translated_142_residues MTALDNLVRIGKLKPLPANRGEFEHLLDLARTLLDTVTSSNGMATESQFILAYDSAHAASRAALRAHGYRSDDRYLVFQC LEHTIGWPTEKWRVLDTCHRRRNAAEYEGNIDLPASLTAELVRLTAELIETVSLLDHLLPST >Mature_141_residues TALDNLVRIGKLKPLPANRGEFEHLLDLARTLLDTVTSSNGMATESQFILAYDSAHAASRAALRAHGYRSDDRYLVFQCL EHTIGWPTEKWRVLDTCHRRRNAAEYEGNIDLPASLTAELVRLTAELIETVSLLDHLLPST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15914; Mature: 15783
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALDNLVRIGKLKPLPANRGEFEHLLDLARTLLDTVTSSNGMATESQFILAYDSAHAAS CCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHH RAALRAHGYRSDDRYLVFQCLEHTIGWPTEKWRVLDTCHRRRNAAEYEGNIDLPASLTAE HHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH LVRLTAELIETVSLLDHLLPST HHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TALDNLVRIGKLKPLPANRGEFEHLLDLARTLLDTVTSSNGMATESQFILAYDSAHAAS CHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHH RAALRAHGYRSDDRYLVFQCLEHTIGWPTEKWRVLDTCHRRRNAAEYEGNIDLPASLTAE HHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH LVRLTAELIETVSLLDHLLPST HHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA