| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690363
Identifier: 116690363
GI number: 116690363
Start: 2605235
End: 2605867
Strand: Direct
Name: 116690363
Synonym: Bcen2424_2343
Alternate gene names: NA
Gene position: 2605235-2605867 (Clockwise)
Preceding gene: 116690362
Following gene: 116690364
Centisome position: 74.78
GC content: 54.98
Gene sequence:
>633_bases GTGCTAAATTTTGGCTCGATCGTGCTAATATCACGGCTTATGACAAAGCTCGGCGACGCCCTCTTTTCCAACGCACAGCA ACCCATTCTGGCCTGCCTGTTTGGGCAGCCCGAACAGTGGTTTCACGTCAAAGAGTTGATCCGGCTGACCGGTCTCGGTA GTGCCAGCGTCCAGCGCGAACTGAATCGTCTCGAAAAAGGTGGCCTCATCGAAACTCGACGCATCGCCAATCTCAAACAG GTGCGAGCGTTTGCCGGCAGTCCCATTTTCAGCGAGCTGCGTCTCATCGTCCTCAAAACCTTCGGGGTCGTCGAGGTGCT CCGCGAAGCACTGTCACCGCTGACCTCAGAGATACAGCTCGCCTTTGTATACGGTTCGGTTGCCCAAGGCAGCGACCACG CCGGTAGCGACGTCGATGTTATGTTGGTCAGTGAGACGCTCAGCTATGGACAAATCATGGCCGCACTCGAATCGGCTGAA AGACAGCTCGGCCGCTCGGTCCAGATCACACAATATACTCACGAGGAATTTCTCGAACGGAAACGCAAAAGTCATCCGTT CCTCGCTGAAGTGCTGCGCCAACCGAAGCTGATGATTATCGGAACCGAGGACGACATTGACCGCATTGGATAA
Upstream 100 bases:
>100_bases CCCTGCAACCGCTCACCGTGGCCATCACCAACGTCTCGCGATATCCCTGCTATCTAGATCCGCCGAACGGTCGCTCATCG AGCTTAAATTTGGCTCGATC
Downstream 100 bases:
>100_bases CCTCGTACGCATCGGAAAACTCAAACCCCTTCCGGCGAACCGCGGCGAATTCGAACATCTGCTCGACCTCGCTCGAACCT TGCTCGATACCGTCACAAGC
Product: putative transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; ArsR Family Transcriptional Regulator; Regulatory Protein ArsR; DNA Polymerase Beta Domain-Containing Protein Region; DNA Polymerase Beta Domain Protein Region; Nucleotidyltransferase; DNA Polymerase Subunit Beta
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MLNFGSIVLISRLMTKLGDALFSNAQQPILACLFGQPEQWFHVKELIRLTGLGSASVQRELNRLEKGGLIETRRIANLKQ VRAFAGSPIFSELRLIVLKTFGVVEVLREALSPLTSEIQLAFVYGSVAQGSDHAGSDVDVMLVSETLSYGQIMAALESAE RQLGRSVQITQYTHEEFLERKRKSHPFLAEVLRQPKLMIIGTEDDIDRIG
Sequences:
>Translated_210_residues MLNFGSIVLISRLMTKLGDALFSNAQQPILACLFGQPEQWFHVKELIRLTGLGSASVQRELNRLEKGGLIETRRIANLKQ VRAFAGSPIFSELRLIVLKTFGVVEVLREALSPLTSEIQLAFVYGSVAQGSDHAGSDVDVMLVSETLSYGQIMAALESAE RQLGRSVQITQYTHEEFLERKRKSHPFLAEVLRQPKLMIIGTEDDIDRIG >Mature_210_residues MLNFGSIVLISRLMTKLGDALFSNAQQPILACLFGQPEQWFHVKELIRLTGLGSASVQRELNRLEKGGLIETRRIANLKQ VRAFAGSPIFSELRLIVLKTFGVVEVLREALSPLTSEIQLAFVYGSVAQGSDHAGSDVDVMLVSETLSYGQIMAALESAE RQLGRSVQITQYTHEEFLERKRKSHPFLAEVLRQPKLMIIGTEDDIDRIG
Specific function: Unknown
COG id: COG1708
COG function: function code R; Predicted nucleotidyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23382; Mature: 23382
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNFGSIVLISRLMTKLGDALFSNAQQPILACLFGQPEQWFHVKELIRLTGLGSASVQRE CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHH LNRLEKGGLIETRRIANLKQVRAFAGSPIFSELRLIVLKTFGVVEVLREALSPLTSEIQL HHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE AFVYGSVAQGSDHAGSDVDVMLVSETLSYGQIMAALESAERQLGRSVQITQYTHEEFLER HEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHH KRKSHPFLAEVLRQPKLMIIGTEDDIDRIG HHCCCCHHHHHHCCCCEEEEECCCCHHHCC >Mature Secondary Structure MLNFGSIVLISRLMTKLGDALFSNAQQPILACLFGQPEQWFHVKELIRLTGLGSASVQRE CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHH LNRLEKGGLIETRRIANLKQVRAFAGSPIFSELRLIVLKTFGVVEVLREALSPLTSEIQL HHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE AFVYGSVAQGSDHAGSDVDVMLVSETLSYGQIMAALESAERQLGRSVQITQYTHEEFLER HEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHH KRKSHPFLAEVLRQPKLMIIGTEDDIDRIG HHCCCCHHHHHHCCCCEEEEECCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA