| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690369
Identifier: 116690369
GI number: 116690369
Start: 2611202
End: 2611897
Strand: Direct
Name: 116690369
Synonym: Bcen2424_2349
Alternate gene names: NA
Gene position: 2611202-2611897 (Clockwise)
Preceding gene: 116690364
Following gene: 116690370
Centisome position: 74.95
GC content: 71.98
Gene sequence:
>696_bases ATGCCAGCCCGCTCCCTGACACTCGACCATCTCGTGATTGCCGCGCGCACCCTCGACGAAGGCGTGCGCCATGTCGCCGA CGCACTCGGCATCGAACCGGCCGGCGGCGGCCGCCATCCGCTGATGCGGACCCACAATGCGCTGTTCGGCGCGTGGAGCG GGCTCTATCTCGAAGTGATCGCGATCGACCCCGACGCGCCCGCGCCGGAAGACGGTGCAAAACCGCCTCGTGCGCGGCTG TTCGGGCTCGACGATCCGGCGATCCAGGCGCGGCTCGCGCAGCAGGGCCCGTTTCTCGCACACTGGGTCGCGCGCGTCGA CCGCCCGCGCCAGCTTGCGCTGTGGCAGCGCCAGTATCCGGCCCGCATCGCGCCCGTCGTCGCGATGCGGCGCGGCGATC TGAGCTGGGGCCTCACGGTGCCCGACGACGGCAGCTTCCCCGCGTGGCAGGACGCAGGCGACGGCCTCGTGCCGTCGCTG ATCCAGTGGGACAGCCCGCGCCATCCGGCCGAATCGCTGCCGGCCGACGGCATCGCGCTGAAAGCGCTCAAGGGCGCCCA TCCGCACGCGGATACGATCCGCGCGCAACTCGACTGGCTCGGCGCCGCCCACCTGCTCGACGTCGAAGCCACCGACGGTC CGCCGGCGCTGGTCGCCGAATTCGATACGCCGCAAGGCCCACGCACGTTGCGCTGA
Upstream 100 bases:
>100_bases CGCACGCCGAGGCGCCTCGCGAGCGGTGCGCCGGCCGGTGCGCCCCCCGCCCGGCACGCCGTCCGCCTACCCTGACACTT TCGCTTCCCGACCGACCCTC
Downstream 100 bases:
>100_bases CGCCGCACGCGCGGCCGCCCTGCTCGTCACACCATACGCACCTCGCCAATACGGAGACACCCACGACATGAATTCGCGCG AAACCCGGGGCATGCTGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MPARSLTLDHLVIAARTLDEGVRHVADALGIEPAGGGRHPLMRTHNALFGAWSGLYLEVIAIDPDAPAPEDGAKPPRARL FGLDDPAIQARLAQQGPFLAHWVARVDRPRQLALWQRQYPARIAPVVAMRRGDLSWGLTVPDDGSFPAWQDAGDGLVPSL IQWDSPRHPAESLPADGIALKALKGAHPHADTIRAQLDWLGAAHLLDVEATDGPPALVAEFDTPQGPRTLR
Sequences:
>Translated_231_residues MPARSLTLDHLVIAARTLDEGVRHVADALGIEPAGGGRHPLMRTHNALFGAWSGLYLEVIAIDPDAPAPEDGAKPPRARL FGLDDPAIQARLAQQGPFLAHWVARVDRPRQLALWQRQYPARIAPVVAMRRGDLSWGLTVPDDGSFPAWQDAGDGLVPSL IQWDSPRHPAESLPADGIALKALKGAHPHADTIRAQLDWLGAAHLLDVEATDGPPALVAEFDTPQGPRTLR >Mature_230_residues PARSLTLDHLVIAARTLDEGVRHVADALGIEPAGGGRHPLMRTHNALFGAWSGLYLEVIAIDPDAPAPEDGAKPPRARLF GLDDPAIQARLAQQGPFLAHWVARVDRPRQLALWQRQYPARIAPVVAMRRGDLSWGLTVPDDGSFPAWQDAGDGLVPSLI QWDSPRHPAESLPADGIALKALKGAHPHADTIRAQLDWLGAAHLLDVEATDGPPALVAEFDTPQGPRTLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24906; Mature: 24774
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPARSLTLDHLVIAARTLDEGVRHVADALGIEPAGGGRHPLMRTHNALFGAWSGLYLEVI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEE AIDPDAPAPEDGAKPPRARLFGLDDPAIQARLAQQGPFLAHWVARVDRPRQLALWQRQYP EECCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHCCC ARIAPVVAMRRGDLSWGLTVPDDGSFPAWQDAGDGLVPSLIQWDSPRHPAESLPADGIAL CHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHCCCCCEEE KALKGAHPHADTIRAQLDWLGAAHLLDVEATDGPPALVAEFDTPQGPRTLR HHHCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCEEEEECCCCCCCCCCC >Mature Secondary Structure PARSLTLDHLVIAARTLDEGVRHVADALGIEPAGGGRHPLMRTHNALFGAWSGLYLEVI CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEE AIDPDAPAPEDGAKPPRARLFGLDDPAIQARLAQQGPFLAHWVARVDRPRQLALWQRQYP EECCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHCCC ARIAPVVAMRRGDLSWGLTVPDDGSFPAWQDAGDGLVPSLIQWDSPRHPAESLPADGIAL CHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHCCCCCEEE KALKGAHPHADTIRAQLDWLGAAHLLDVEATDGPPALVAEFDTPQGPRTLR HHHCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA