Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116690351

Identifier: 116690351

GI number: 116690351

Start: 2593681

End: 2594040

Strand: Reverse

Name: 116690351

Synonym: Bcen2424_2330

Alternate gene names: NA

Gene position: 2594040-2593681 (Counterclockwise)

Preceding gene: 116690352

Following gene: 116690349

Centisome position: 74.46

GC content: 63.06

Gene sequence:

>360_bases
ATGAACAACGCATTCAAGACGGCGGCGGTTGCACTGGCGGCCGGCCTCGCGATCGGTACCGCGCACGCCGCGGACATCTC
GAAGGGCAAGGAACTGGTCGAATCGCACAACTGCGCGGCCTGCCACGGCGCGCAGCTGAACAAGCCGATCAACGCGGAGT
ACCCGCGCCTCGCCGGCCAGCACGCCGACTATCTCGTGTGGGCGATGCGCCAGTACCAGATGGGGCTGACGAACCCGCTG
ATCGGCCGCAACAACGCGATCATGCAGGCGCAGGTACAGAACCTGTCGGTCAGCGACATGAAGGACATCGCGTCCTACAT
CGAGTCGCTGAAGGAAACCGACCTCGTGTTCAAGAAGTAA

Upstream 100 bases:

>100_bases
GATCTGTCGGCGTACTACGCCGCCCAGAAGGCCGACACGAAGGACAACCCCTACAAGTAAAGCGCGCGCCGCCGATCTCT
CCGGCGGGACAGGAGCATTC

Downstream 100 bases:

>100_bases
GCGCGACGGGCCTCACGGGCTCGCGCAGCAAGCTCACGGGCTCGCGCAGCAAGAATGCCCCGCCTCGGCGGGGTATTTTT
TTGTCTGCGGCGCGGCTGTC

Product: cytochrome c, class I

Products: NA

Alternate protein names: Cytochrome; Cytochrome C Family Protein; Cytochrome C -Related Protein; Class I Cytochrome C; Cytochrome C-Type Protein; Cytochrome C Class IC; Cytochrome C; Periplasmic Cytochrome

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MNNAFKTAAVALAAGLAIGTAHAADISKGKELVESHNCAACHGAQLNKPINAEYPRLAGQHADYLVWAMRQYQMGLTNPL
IGRNNAIMQAQVQNLSVSDMKDIASYIESLKETDLVFKK

Sequences:

>Translated_119_residues
MNNAFKTAAVALAAGLAIGTAHAADISKGKELVESHNCAACHGAQLNKPINAEYPRLAGQHADYLVWAMRQYQMGLTNPL
IGRNNAIMQAQVQNLSVSDMKDIASYIESLKETDLVFKK
>Mature_119_residues
MNNAFKTAAVALAAGLAIGTAHAADISKGKELVESHNCAACHGAQLNKPINAEYPRLAGQHADYLVWAMRQYQMGLTNPL
IGRNNAIMQAQVQNLSVSDMKDIASYIESLKETDLVFKK

Specific function: Unknown

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12872; Mature: 12872

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNAFKTAAVALAAGLAIGTAHAADISKGKELVESHNCAACHGAQLNKPINAEYPRLAGQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
HADYLVWAMRQYQMGLTNPLIGRNNAIMQAQVQNLSVSDMKDIASYIESLKETDLVFKK
CCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNNAFKTAAVALAAGLAIGTAHAADISKGKELVESHNCAACHGAQLNKPINAEYPRLAGQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
HADYLVWAMRQYQMGLTNPLIGRNNAIMQAQVQNLSVSDMKDIASYIESLKETDLVFKK
CCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA