| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690349
Identifier: 116690349
GI number: 116690349
Start: 2591966
End: 2592895
Strand: Reverse
Name: 116690349
Synonym: Bcen2424_2328
Alternate gene names: NA
Gene position: 2592895-2591966 (Counterclockwise)
Preceding gene: 116690351
Following gene: 116690346
Centisome position: 74.43
GC content: 73.98
Gene sequence:
>930_bases ATGACCGCCACCGTTCGCTCATCGTCCGCCGCCCTGCAGGGCGCGTTCTACGTCGCGTTGTCCGCCGCCGCGTTCGGCGC GATGGCGATTTTCGGCCGCTATGCGTATGCGGCCGGCGTCGACGTGCTCGGGCTGCTGATCGTGCGCTTCGCGATCGGCG GCGCGGTGCTCGCGGCGATCGCACGGCACCGCCGCGTCGCCTGGCCGCGCGGCCGGGCGCTCGCGCCGCTGGTGGCGATG GGCGCGCTCGGCTACGTCGGGCAGTCGTTCTGCTATTTCAGCGCGCTGCAGCACGCGCAGGCGAGTCTCGTCGCGCTGCT GCTGTACCTGTACCCGGCGTTCGTCACGCTGCTCGCCGCGTGGTGGCTCGGCGAGCGCCTGACACGGGCGAAGGCCGTCG CGCTGGTGCTGTGCGTCGCGGGTTCGGCGCTGATGGTCGGCGGCGGGCACGGCGAGCCGCTCGGGATCGCGCTGGCGCTG GCCGCCGCGGTGATCTACTCGCTGTATATCGTCGGCGGCACGAAGGCGACGCGCGGCGTCGATCCCCTCGCGACCACCGC GATCATCTGCCTGTCGGCCACCGCGACGCTCGTCGCGATCGCCGTCGTGCGAACGGCGGGGTTCGGCGCGCCGCCGCGCT GGCCCGCGACGGCCGGCGGCTGGGCGTCGATGCTCGCGATCGCGCTGGTGTCGACGGTCGCGGCCATGCTTGCGTTCTTC GCCGGGCTCGAGCGGCTCGGGGCCGCGCGCACGTCGATGCTGTCGACGCTCGAACCGGTCGTGACGGTCGCGCTCGCGGC GCTGCTGTTCGGGGAAGCATTGTCGCCGCTGCAGTGGGCGGGTGGCGTCGCGATTCTGGCGGCCGTGCTGGCGCTCGTGC GCGCGGGCGGCGCGGCCGCCGACGACGCGACGGCGACATCCAACGCGTAA
Upstream 100 bases:
>100_bases CCGCCCGCCGCGCAACGGGTAAGCGCGGGCTAGGCTCGGCGCCGCCGCGCCGCTACACTCCGACGATTCCCGTCACGGCG CCCCGTTCGCCCGTTTCATC
Downstream 100 bases:
>100_bases GCGGGGAAGGGAGCGGGCGTCGCGACGGCGCCTGCGGAACTCGCCCGCGCTGCCTGGCGCTTATTCGTTCGGCGGCGGCG TCTTCGGCCGGAACTCGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MTATVRSSSAALQGAFYVALSAAAFGAMAIFGRYAYAAGVDVLGLLIVRFAIGGAVLAAIARHRRVAWPRGRALAPLVAM GALGYVGQSFCYFSALQHAQASLVALLLYLYPAFVTLLAAWWLGERLTRAKAVALVLCVAGSALMVGGGHGEPLGIALAL AAAVIYSLYIVGGTKATRGVDPLATTAIICLSATATLVAIAVVRTAGFGAPPRWPATAGGWASMLAIALVSTVAAMLAFF AGLERLGAARTSMLSTLEPVVTVALAALLFGEALSPLQWAGGVAILAAVLALVRAGGAAADDATATSNA
Sequences:
>Translated_309_residues MTATVRSSSAALQGAFYVALSAAAFGAMAIFGRYAYAAGVDVLGLLIVRFAIGGAVLAAIARHRRVAWPRGRALAPLVAM GALGYVGQSFCYFSALQHAQASLVALLLYLYPAFVTLLAAWWLGERLTRAKAVALVLCVAGSALMVGGGHGEPLGIALAL AAAVIYSLYIVGGTKATRGVDPLATTAIICLSATATLVAIAVVRTAGFGAPPRWPATAGGWASMLAIALVSTVAAMLAFF AGLERLGAARTSMLSTLEPVVTVALAALLFGEALSPLQWAGGVAILAAVLALVRAGGAAADDATATSNA >Mature_308_residues TATVRSSSAALQGAFYVALSAAAFGAMAIFGRYAYAAGVDVLGLLIVRFAIGGAVLAAIARHRRVAWPRGRALAPLVAMG ALGYVGQSFCYFSALQHAQASLVALLLYLYPAFVTLLAAWWLGERLTRAKAVALVLCVAGSALMVGGGHGEPLGIALALA AAVIYSLYIVGGTKATRGVDPLATTAIICLSATATLVAIAVVRTAGFGAPPRWPATAGGWASMLAIALVSTVAAMLAFFA GLERLGAARTSMLSTLEPVVTVALAALLFGEALSPLQWAGGVAILAAVLALVRAGGAAADDATATSNA
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31102; Mature: 30971
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATVRSSSAALQGAFYVALSAAAFGAMAIFGRYAYAAGVDVLGLLIVRFAIGGAVLAAI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARHRRVAWPRGRALAPLVAMGALGYVGQSFCYFSALQHAQASLVALLLYLYPAFVTLLAA HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WWLGERLTRAKAVALVLCVAGSALMVGGGHGEPLGIALALAAAVIYSLYIVGGTKATRGV HHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC DPLATTAIICLSATATLVAIAVVRTAGFGAPPRWPATAGGWASMLAIALVSTVAAMLAFF CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH AGLERLGAARTSMLSTLEPVVTVALAALLFGEALSPLQWAGGVAILAAVLALVRAGGAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHHCCCCCC DDATATSNA CCCCCCCCC >Mature Secondary Structure TATVRSSSAALQGAFYVALSAAAFGAMAIFGRYAYAAGVDVLGLLIVRFAIGGAVLAAI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARHRRVAWPRGRALAPLVAMGALGYVGQSFCYFSALQHAQASLVALLLYLYPAFVTLLAA HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WWLGERLTRAKAVALVLCVAGSALMVGGGHGEPLGIALALAAAVIYSLYIVGGTKATRGV HHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC DPLATTAIICLSATATLVAIAVVRTAGFGAPPRWPATAGGWASMLAIALVSTVAAMLAFF CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH AGLERLGAARTSMLSTLEPVVTVALAALLFGEALSPLQWAGGVAILAAVLALVRAGGAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHHCCCCCC DDATATSNA CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA