| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is gltI [H]
Identifier: 116690194
GI number: 116690194
Start: 2420954
End: 2421874
Strand: Direct
Name: gltI [H]
Synonym: Bcen2424_2173
Alternate gene names: 116690194
Gene position: 2420954-2421874 (Clockwise)
Preceding gene: 116690182
Following gene: 116690197
Centisome position: 69.49
GC content: 66.02
Gene sequence:
>921_bases ATGCCCTTCCCGTCCCGATTCGCCGCCCGCGTCGGCCGCCCCCTGCTCGTCGCCGCATGCGCGCTCGCGTGCGGCGCGTC CGTCGCCGCCGAGCCGCTGGCCGGCACGCTCGACAAGGTCCGGCAATCCAACCTGATTTCGATCGGTCATCGAGAAACGT CGGTGCCGTTCTCCTATGTCGACGCGGGCGGCAAGGTCATCGGCTTCTCGCAGGACCTGTGCGACCGCGTGATCGCCGCG GTGAAGGCGCGCACCGGCAAGCCCGATCTGCAGGTGCGCTTCATTCCGGTCACGTCGCAGAACCGCATTCCGCTCGTGCA GAACGGCACCGTCGATCTCGAATGCGGCGTGACGACCAACCTCGCCGCACGCCATGCGCAGGTTGCGTTCTCGACCACCT TCTTCGTCGCGACGACGCGCCTGCTCACGCGCACCACGTCGGGCATCCGAGACTTCCCCGATCTCGCCGGCAAGACGGTC GTGACGAACCAGGGCACGACGTCCGAACGCCTGCTGCGCAAGATGAACGAGGAAAAGAAGATGAACATGCAGATCATCAG CGCGAAGGACTACGGCGAAGGACGCCTCACGCTCGAATCGGGCCGCGCGGCCGCGTACATGATGGACGACGTGCTGCTCG CGGGCGTGCGCCAGCTCGCCGCGAAACCGGCCGACTGGCAGCTCGTCGGCACGCCGCAATCGTCGGAAGCCTACGGGTTC ATGCTGCGCAAGGACGATCCGCAGTTCAAGGCGCTCGTCGACGGCGTGCTCGTGCAGCTGATGAAAAGCGGCGAGATCAA CGCGCTGTACGACAAATGGTTCATGAAACCGGTGCCGCCGAAGGGCCTGTCGTTCGACTTCCCGATGAGCGACGTGATCA AGGCGCGTTACGCGGCGCCGAACGACGCGCCGCTCGAGTAA
Upstream 100 bases:
>100_bases GCGGCCCGGCAGGCCGGTCGGCGCGATCCGGCGCTTAACATGTGTTGCAATTATTTTGTCTTTGGCAACATACGAATCAT CACTCGCCACGGAGACCGTC
Downstream 100 bases:
>100_bases GCGCCGCGCGTCACGCCCGGCTTACGCGCGCGTCCACGCGACGCACGCCGCGTAGCCGGGCGCCGCGTCGAGCCATGCCG CGTCGAACGCGGCGACGCCG
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MPFPSRFAARVGRPLLVAACALACGASVAAEPLAGTLDKVRQSNLISIGHRETSVPFSYVDAGGKVIGFSQDLCDRVIAA VKARTGKPDLQVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVAFSTTFFVATTRLLTRTTSGIRDFPDLAGKTV VTNQGTTSERLLRKMNEEKKMNMQIISAKDYGEGRLTLESGRAAAYMMDDVLLAGVRQLAAKPADWQLVGTPQSSEAYGF MLRKDDPQFKALVDGVLVQLMKSGEINALYDKWFMKPVPPKGLSFDFPMSDVIKARYAAPNDAPLE
Sequences:
>Translated_306_residues MPFPSRFAARVGRPLLVAACALACGASVAAEPLAGTLDKVRQSNLISIGHRETSVPFSYVDAGGKVIGFSQDLCDRVIAA VKARTGKPDLQVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVAFSTTFFVATTRLLTRTTSGIRDFPDLAGKTV VTNQGTTSERLLRKMNEEKKMNMQIISAKDYGEGRLTLESGRAAAYMMDDVLLAGVRQLAAKPADWQLVGTPQSSEAYGF MLRKDDPQFKALVDGVLVQLMKSGEINALYDKWFMKPVPPKGLSFDFPMSDVIKARYAAPNDAPLE >Mature_305_residues PFPSRFAARVGRPLLVAACALACGASVAAEPLAGTLDKVRQSNLISIGHRETSVPFSYVDAGGKVIGFSQDLCDRVIAAV KARTGKPDLQVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVAFSTTFFVATTRLLTRTTSGIRDFPDLAGKTVV TNQGTTSERLLRKMNEEKKMNMQIISAKDYGEGRLTLESGRAAAYMMDDVLLAGVRQLAAKPADWQLVGTPQSSEAYGFM LRKDDPQFKALVDGVLVQLMKSGEINALYDKWFMKPVPPKGLSFDFPMSDVIKARYAAPNDAPLE
Specific function: Part of the binding-protein-dependent transport system for glutamate and aspartate. Binds to both aspartate and glutamate [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1786876, Length=272, Percent_Identity=58.0882352941177, Blast_Score=339, Evalue=1e-94, Organism=Escherichia coli, GI1788228, Length=273, Percent_Identity=24.5421245421245, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1788649, Length=270, Percent_Identity=27.4074074074074, Blast_Score=65, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 33216; Mature: 33085
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFPSRFAARVGRPLLVAACALACGASVAAEPLAGTLDKVRQSNLISIGHRETSVPFSYV CCCCHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCEE DAGGKVIGFSQDLCDRVIAAVKARTGKPDLQVRFIPVTSQNRIPLVQNGTVDLECGVTTN CCCCEEEECCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCEEECCCEEEECCCCCC LAARHAQVAFSTTFFVATTRLLTRTTSGIRDFPDLAGKTVVTNQGTTSERLLRKMNEEKK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCEEEECCCCCHHHHHHHHCHHHH MNMQIISAKDYGEGRLTLESGRAAAYMMDDVLLAGVRQLAAKPADWQLVGTPQSSEAYGF CCEEEEEECCCCCCEEEEECCCEEHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEE MLRKDDPQFKALVDGVLVQLMKSGEINALYDKWFMKPVPPKGLSFDFPMSDVIKARYAAP EEECCCCHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCC NDAPLE CCCCCC >Mature Secondary Structure PFPSRFAARVGRPLLVAACALACGASVAAEPLAGTLDKVRQSNLISIGHRETSVPFSYV CCCHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCEE DAGGKVIGFSQDLCDRVIAAVKARTGKPDLQVRFIPVTSQNRIPLVQNGTVDLECGVTTN CCCCEEEECCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCEEECCCEEEECCCCCC LAARHAQVAFSTTFFVATTRLLTRTTSGIRDFPDLAGKTVVTNQGTTSERLLRKMNEEKK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCEEEECCCCCHHHHHHHHCHHHH MNMQIISAKDYGEGRLTLESGRAAAYMMDDVLLAGVRQLAAKPADWQLVGTPQSSEAYGF CCEEEEEECCCCCCEEEEECCCEEHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEE MLRKDDPQFKALVDGVLVQLMKSGEINALYDKWFMKPVPPKGLSFDFPMSDVIKARYAAP EEECCCCHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCC NDAPLE CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 10493123; 1091635; 1091636 [H]