| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is cinA [C]
Identifier: 116690172
GI number: 116690172
Start: 2392233
End: 2393048
Strand: Reverse
Name: cinA [C]
Synonym: Bcen2424_2151
Alternate gene names: 116690172
Gene position: 2393048-2392233 (Counterclockwise)
Preceding gene: 116690173
Following gene: 116690170
Centisome position: 68.69
GC content: 67.89
Gene sequence:
>816_bases ATGAGCATCGGCATCATCATCATCGGCGACGAAATCCTTTCGGGCCGCCGGCAGGACAAGCATCTGGCGAAGGTCATCGA GCTGCTCGGCGCGCGCGGCCTCGCGCTCGACTGGGCCGAATACGTCGGCGACGATCCGGCGCGCATCACCGCGACGCTCG CGCGCGCGATCGCGTCGGGCGACATCGTGTTCTCGACGGGCGGGATCGGCGCGACGCCGGACGACCATACGCGCCAGTGC GCGGCCGCCGCGCTCGGCGTGCCGCTCGAGCTGCATCCGGAGGCGAAGGCGTTGATTTCGGAGCGCATTCGCGAAACGCA TACCGATCCGGCCGCGCCGGTCGATTTCGATTCCCCGGAGAACCAGCATCGCTTCAACATGGGCGTGTTCCCGGCGGGCG CGACGATCATCCCGAACGGCTACAACCGGATTCCCGGCTTCTCGGTCGGCGATCTGCATTTCGTGCCGGGCTTCCCGGTG ATGGCGTGGCCGATGATCGAATGGGTGCTCGATACGAAGTACGCGCACCTGCATCACGCGACGCCGCATGCCGAGCGCTC GCTGTACGTGTTCGAGCTGCCGGAATCGACGCTCACGCCGTTGATGGAGAAGATCGAGCGCGATTTCCCCGGTGTGCGCG TGTTCAGCCTGCCGAGCGTCGGCGACGCGGAGCGCGGGGGCATCTATGCGCGCCGTCACATCGATCTCGGCGTGAAGGGC GAGCCGGAAGCGGTCGCGGCCGCGTTCGTGAAGCTGCGCGAAGGCGTGCACCTGCTCGGCGGCGACGTCGTCGAGCCCGA TACGCCGCGCGCCTGA
Upstream 100 bases:
>100_bases TCCTCGTCTTCTCGGCGCTGTGGTTCGGGCACTACTGCCTGCGCGCGCTGGAGGACCTGCGCGCGAGTGCGCGCGCCACC GCAATCGACATGGGGCAGGC
Downstream 100 bases:
>100_bases GCGGCCTGCCACGCCGCCTTGTCAAAAGCAACGGGCCGCGCAACGCGGCCCGTCATCGGCATGTCATCGCCCGGCTCGAC GATGAGGTCGTCGCAGCCGG
Product: molybdopterin binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MSIGIIIIGDEILSGRRQDKHLAKVIELLGARGLALDWAEYVGDDPARITATLARAIASGDIVFSTGGIGATPDDHTRQC AAAALGVPLELHPEAKALISERIRETHTDPAAPVDFDSPENQHRFNMGVFPAGATIIPNGYNRIPGFSVGDLHFVPGFPV MAWPMIEWVLDTKYAHLHHATPHAERSLYVFELPESTLTPLMEKIERDFPGVRVFSLPSVGDAERGGIYARRHIDLGVKG EPEAVAAAFVKLREGVHLLGGDVVEPDTPRA
Sequences:
>Translated_271_residues MSIGIIIIGDEILSGRRQDKHLAKVIELLGARGLALDWAEYVGDDPARITATLARAIASGDIVFSTGGIGATPDDHTRQC AAAALGVPLELHPEAKALISERIRETHTDPAAPVDFDSPENQHRFNMGVFPAGATIIPNGYNRIPGFSVGDLHFVPGFPV MAWPMIEWVLDTKYAHLHHATPHAERSLYVFELPESTLTPLMEKIERDFPGVRVFSLPSVGDAERGGIYARRHIDLGVKG EPEAVAAAFVKLREGVHLLGGDVVEPDTPRA >Mature_270_residues SIGIIIIGDEILSGRRQDKHLAKVIELLGARGLALDWAEYVGDDPARITATLARAIASGDIVFSTGGIGATPDDHTRQCA AAALGVPLELHPEAKALISERIRETHTDPAAPVDFDSPENQHRFNMGVFPAGATIIPNGYNRIPGFSVGDLHFVPGFPVM AWPMIEWVLDTKYAHLHHATPHAERSLYVFELPESTLTPLMEKIERDFPGVRVFSLPSVGDAERGGIYARRHIDLGVKGE PEAVAAAFVKLREGVHLLGGDVVEPDTPRA
Specific function: Unknown
COG id: COG1058
COG function: function code R; Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CinA family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6323832, Length=172, Percent_Identity=31.9767441860465, Blast_Score=84, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008136 - InterPro: IPR008135 - InterPro: IPR001453 [H]
Pfam domain/function: PF02464 CinA; PF00994 MoCF_biosynth [H]
EC number: NA
Molecular weight: Translated: 29338; Mature: 29207
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIGIIIIGDEILSGRRQDKHLAKVIELLGARGLALDWAEYVGDDPARITATLARAIASG CEEEEEEECHHHHCCCCHHHHHHHHHHHHCCCCCEEEHHHHHCCCHHHHHHHHHHHHHCC DIVFSTGGIGATPDDHTRQCAAAALGVPLELHPEAKALISERIRETHTDPAAPVDFDSPE CEEEECCCCCCCCCHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCC NQHRFNMGVFPAGATIIPNGYNRIPGFSVGDLHFVPGFPVMAWPMIEWVLDTKYAHLHHA CCCEEECEEECCCCEECCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCC TPHAERSLYVFELPESTLTPLMEKIERDFPGVRVFSLPSVGDAERGGIYARRHIDLGVKG CCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCC EPEAVAAAFVKLREGVHLLGGDVVEPDTPRA CHHHHHHHHHHHHCCCCEECCCCCCCCCCCC >Mature Secondary Structure SIGIIIIGDEILSGRRQDKHLAKVIELLGARGLALDWAEYVGDDPARITATLARAIASG EEEEEEECHHHHCCCCHHHHHHHHHHHHCCCCCEEEHHHHHCCCHHHHHHHHHHHHHCC DIVFSTGGIGATPDDHTRQCAAAALGVPLELHPEAKALISERIRETHTDPAAPVDFDSPE CEEEECCCCCCCCCHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCC NQHRFNMGVFPAGATIIPNGYNRIPGFSVGDLHFVPGFPVMAWPMIEWVLDTKYAHLHHA CCCEEECEEECCCCEECCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCC TPHAERSLYVFELPESTLTPLMEKIERDFPGVRVFSLPSVGDAERGGIYARRHIDLGVKG CCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCC EPEAVAAAFVKLREGVHLLGGDVVEPDTPRA CHHHHHHHHHHHHCCCCEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA