| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690173
Identifier: 116690173
GI number: 116690173
Start: 2393045
End: 2393872
Strand: Reverse
Name: 116690173
Synonym: Bcen2424_2152
Alternate gene names: NA
Gene position: 2393872-2393045 (Counterclockwise)
Preceding gene: 116690174
Following gene: 116690172
Centisome position: 68.71
GC content: 68.0
Gene sequence:
>828_bases ATGAACGACTTGCTGCGTTCCTTCGTCCGGGCGCTCGCCAGCGCGCTGCACCCGCGCATGCTGTGGCTCACCCTGATGCC GTTCGTCGTGTCGGCGCTGCTGTGGGGTGCCGTGCTGTGGTTCTCTTGGCAGACGCTGCTGGACCTCGCGCGCGGCGCGC TCGACGGCTTCGTGCTGACGGCCATGCTGTATCGCGCGTTCGACGCGATCGGCATGTCGCAGCTGCATGCGGTCGTCGCG CCGTTCGTGGTCGTGTCGCTTGCGATCCCGCTGATCGTGCTGACCGTGCTGCTGCTGATCGCGACGATCTCGATGCCGGT CGTGATCAAGCACCTGTCGAATCGCCAGTTCGCGGCACTCGAAGCGAGGCGGGGCGGCACCTTCTTCGGCAGCGTGGTCA ATTCGCTCGGCGCGGCGATCGTCGGCGTCGTGCTGCTCGTCGTCACGATCCCGCTGTGGCTGATTCCGCCGTTCTTCGCG CTGCTGCCGCCGGTGATCTGGGGCTGGCTCACGTACCGCGTGATGACCTACGACGCGCTCGCGCTGCACGCGAGCCGCGA CGAGCGCCGCGCGCTGGTGCGCCGGCACCGCTGGCCGCTGATCGGCATCGGCGTCGCGACCGGGCTGCTTGGCACCGTGC CGACCTTCGTGTGGGTCTCGTCGGTCTGGATGATGGTGCTGTTCCCGTTCGTCGCGGCCGCCATGATCTGGGTTTACGCT TTCATCCTCGTCTTCTCGGCGCTGTGGTTCGGGCACTACTGCCTGCGCGCGCTGGAGGACCTGCGCGCGAGTGCGCGCGC CACCGCAATCGACATGGGGCAGGCATGA
Upstream 100 bases:
>100_bases ACGACCCTTCCACGCGGCCCGCATGCGCTTTGGCGCATGCGGGCCGCGTGGTTTATCCTTTCCCCGTTTTTCTCCGTCAA TCCAGATTCCATAGGCTCGT
Downstream 100 bases:
>100_bases GCATCGGCATCATCATCATCGGCGACGAAATCCTTTCGGGCCGCCGGCAGGACAAGCATCTGGCGAAGGTCATCGAGCTG CTCGGCGCGCGCGGCCTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Inner Membrane Protein
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MNDLLRSFVRALASALHPRMLWLTLMPFVVSALLWGAVLWFSWQTLLDLARGALDGFVLTAMLYRAFDAIGMSQLHAVVA PFVVVSLAIPLIVLTVLLLIATISMPVVIKHLSNRQFAALEARRGGTFFGSVVNSLGAAIVGVVLLVVTIPLWLIPPFFA LLPPVIWGWLTYRVMTYDALALHASRDERRALVRRHRWPLIGIGVATGLLGTVPTFVWVSSVWMMVLFPFVAAAMIWVYA FILVFSALWFGHYCLRALEDLRASARATAIDMGQA
Sequences:
>Translated_275_residues MNDLLRSFVRALASALHPRMLWLTLMPFVVSALLWGAVLWFSWQTLLDLARGALDGFVLTAMLYRAFDAIGMSQLHAVVA PFVVVSLAIPLIVLTVLLLIATISMPVVIKHLSNRQFAALEARRGGTFFGSVVNSLGAAIVGVVLLVVTIPLWLIPPFFA LLPPVIWGWLTYRVMTYDALALHASRDERRALVRRHRWPLIGIGVATGLLGTVPTFVWVSSVWMMVLFPFVAAAMIWVYA FILVFSALWFGHYCLRALEDLRASARATAIDMGQA >Mature_275_residues MNDLLRSFVRALASALHPRMLWLTLMPFVVSALLWGAVLWFSWQTLLDLARGALDGFVLTAMLYRAFDAIGMSQLHAVVA PFVVVSLAIPLIVLTVLLLIATISMPVVIKHLSNRQFAALEARRGGTFFGSVVNSLGAAIVGVVLLVVTIPLWLIPPFFA LLPPVIWGWLTYRVMTYDALALHASRDERRALVRRHRWPLIGIGVATGLLGTVPTFVWVSSVWMMVLFPFVAAAMIWVYA FILVFSALWFGHYCLRALEDLRASARATAIDMGQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30458; Mature: 30458
Theoretical pI: Translated: 11.13; Mature: 11.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDLLRSFVRALASALHPRMLWLTLMPFVVSALLWGAVLWFSWQTLLDLARGALDGFVLT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMLYRAFDAIGMSQLHAVVAPFVVVSLAIPLIVLTVLLLIATISMPVVIKHLSNRQFAAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH EARRGGTFFGSVVNSLGAAIVGVVLLVVTIPLWLIPPFFALLPPVIWGWLTYRVMTYDAL HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALHASRDERRALVRRHRWPLIGIGVATGLLGTVPTFVWVSSVWMMVLFPFVAAAMIWVYA HHHCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FILVFSALWFGHYCLRALEDLRASARATAIDMGQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNDLLRSFVRALASALHPRMLWLTLMPFVVSALLWGAVLWFSWQTLLDLARGALDGFVLT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMLYRAFDAIGMSQLHAVVAPFVVVSLAIPLIVLTVLLLIATISMPVVIKHLSNRQFAAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH EARRGGTFFGSVVNSLGAAIVGVVLLVVTIPLWLIPPFFALLPPVIWGWLTYRVMTYDAL HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALHASRDERRALVRRHRWPLIGIGVATGLLGTVPTFVWVSSVWMMVLFPFVAAAMIWVYA HHHCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FILVFSALWFGHYCLRALEDLRASARATAIDMGQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA